NO05G02670, NO05G02670 (gene) Nannochloropsis oceanica

Overview
NameNO05G02670
Unique NameNO05G02670
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3780
Alignment locationchr5:707204..710983 -

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Properties
Property NameValue
Description26S proteasome, regulatory subunit Rpn7;Proteasome component (PCI) domain
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr5genomechr5:707204..710983 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0000338protein deneddylation
GO:0006464cellular protein modification process
Vocabulary: Cellular Component
TermDefinition
GO:0008180COP9 signalosome
GO:0005737cytoplasm
GO:0005634nucleus
Vocabulary: INTERPRO
TermDefinition
IPR036390WH_DNA-bd_sf
IPR033008CSN1
IPR01958526S_proteasome_reg_su-Rpn7
IPR000717PCI_dom
Homology
[Close]
BLAST of NO05G02670 vs. NCBI_GenBank
Match: EWM28121.1 (fusca protein fus6 [Nannochloropsis gaditana])

HSP 1 Score: 620.2 bits (1598), Expect = 6.900e-174
Identity = 300/420 (71.43%), Postives = 355/420 (84.52%), Query Frame = 0 
Query:   96 SDDIDAPNFDLEAYAARYVGPTKVRRLLFIAPRCKGRELDAYRLALDTLKERGSMNVELYREVVGLVAGRLGPAYQLDSAWADGLEKQAAAQKERLESDLQSSRTSLAKESIRLGYQDLGEFYYARGDLDNALKNFVRTRDYCSMTRHSVDMCLNVIKVAVGLDSFSHVNTYVTKAEHTPDLNDPKARHKLKAAAGLVQLSQQHYTNAARKFLECGVAGLTKDKPNDNAPAPFAQVLAAEDVAVYGGLCALASLDRTELRRRVVDNMAFRGLLDLVPWMRELIYDFCGSKYGGCLRVLGAMKGELMLDLHLARHVSVLYQQIRERCFLQYFSPYLSVDLARMSEAFGAPVGEMEKEVAKLIRSNRLPARVDSQKKTLHRRQVDPREEGYKKVFGMGKDFLREVRAMLLRTSLVEHGVCVD 516
            +DDIDAPNFD++ YAARY G TK+RRLLFIA  CK RELDAYRLALD L +  S+N++LYR+V+GLVAGRLGPAY LD+ WA+ ++K+AA QKERLESDLQ+SRT +AKESIRLGYQDLGEF+YARGDLDNALKNFVRTRDYCS+ RH+V+MCLNVIKV+VGLDSF+HV+TYV+KAEH   +NDPK RHKLKAAAGL QLSQ +Y +AARKFL+CG +GLT+  P D  PA FA VLA EDVA YGGLCALASLDR EL+R +++N  F+GLLDLVP +RELIYDFC S+YG CL  L A+K EL+LD+HL RHV  LYQ+IRERC LQYF PYLSVDL  M+  F  P+  +EKE+A LI +NR+PAR+DSQ+KTLHRRQVDPRE GYKKVF MG++FLRE+RAML R SL+EH V V+
Sbjct:   46 NDDIDAPNFDIDTYAARYAGYTKLRRLLFIAQHCKSRELDAYRLALDALTQPRSLNIQLYRKVMGLVAGRLGPAYSLDATWAEEIDKRAAMQKERLESDLQTSRTGMAKESIRLGYQDLGEFHYARGDLDNALKNFVRTRDYCSIARHNVEMCLNVIKVSVGLDSFAHVSTYVSKAEHATGMNDPKVRHKLKAAAGLAQLSQHNYDSAARKFLDCGPSGLTRGTPQDPGPASFAHVLAPEDVATYGGLCALASLDRPELKRSLLENTTFKGLLDLVPMVRELIYDFCRSRYGACLGALAALKPELLLDVHLHRHVESLYQRIRERCLLQYFIPYLSVDLGSMANTFDTPLPRLEKEIAGLIVTNRMPARIDSQRKTLHRRQVDPREAGYKKVFSMGQEFLREMRAMLFRMSLLEHSVFVE 465
[Close]
BLAST of NO05G02670 vs. NCBI_GenBank
Match: EWM28122.1 (fusca protein fus6 [Nannochloropsis gaditana])

HSP 1 Score: 602.4 bits (1552), Expect = 1.500e-168
Identity = 292/411 (71.05%), Postives = 346/411 (84.18%), Query Frame = 0 
Query:  105 DLEAYAARYVGPTKVRRLLFIAPRCKGRELDAYRLALDTLKERGSMNVELYREVVGLVAGRLGPAYQLDSAWADGLEKQAAAQKERLESDLQSSRTSLAKESIRLGYQDLGEFYYARGDLDNALKNFVRTRDYCSMTRHSVDMCLNVIKVAVGLDSFSHVNTYVTKAEHTPDLNDPKARHKLKAAAGLVQLSQQHYTNAARKFLECGVAGLTKDKPNDNAPAPFAQVLAAEDVAVYGGLCALASLDRTELRRRVVDNMAFRGLLDLVPWMRELIYDFCGSKYGGCLRVLGAMKGELMLDLHLARHVSVLYQQIRERCFLQYFSPYLSVDLARMSEAFGAPVGEMEKEVAKLIRSNRLPARVDSQKKTLHRRQVDPREEGYKKVFGMGKDFLREVRAMLLRTSLVEHGVCVD 516
            D++ YAARY G TK+RRLLFIA  CK RELDAYRLALD L +  S+N++LYR+V+GLVAGRLGPAY LD+ WA+ ++K+AA QKERLESDLQ+SRT +AKESIRLGYQDLGEF+YARGDLDNALKNFVRTRDYCS+ RH+V+MCLNVIKV+VGLDSF+HV+TYV+KAEH   +NDPK RHKLKAAAGL QLSQ +Y +AARKFL+CG +GLT+  P D  PA FA VLA EDVA YGGLCALASLDR EL+R +++N  F+GLLDLVP +RELIYDFC S+YG CL  L A+K EL+LD+HL RHV  LYQ+IRERC LQYF PYLSVDL  M+  F  P+  +EKE+A LI +NR+PAR+DSQ+KTLHRRQVDPRE GYKKVF MG++FLRE+RAML R SL+EH V V+
Sbjct:   43 DIDTYAARYAGYTKLRRLLFIAQHCKSRELDAYRLALDALTQPRSLNIQLYRKVMGLVAGRLGPAYSLDATWAEEIDKRAAMQKERLESDLQTSRTGMAKESIRLGYQDLGEFHYARGDLDNALKNFVRTRDYCSIARHNVEMCLNVIKVSVGLDSFAHVSTYVSKAEHATGMNDPKVRHKLKAAAGLAQLSQHNYDSAARKFLDCGPSGLTRGTPQDPGPASFAHVLAPEDVATYGGLCALASLDRPELKRSLLENTTFKGLLDLVPMVRELIYDFCRSRYGACLGALAALKPELLLDVHLHRHVESLYQRIRERCLLQYFIPYLSVDLGSMANTFDTPLPRLEKEIAGLIVTNRMPARIDSQRKTLHRRQVDPREAGYKKVFSMGQEFLREMRAMLFRMSLLEHSVFVE 453
[Close]
BLAST of NO05G02670 vs. NCBI_GenBank
Match: XP_010255512.1 (PREDICTED: COP9 signalosome complex subunit 1 [Nelumbo nucifera])

HSP 1 Score: 401.7 bits (1031), Expect = 3.800e-108
Identity = 205/414 (49.52%), Postives = 281/414 (67.87%), Query Frame = 0 
Query:   99 IDAPNFDLEAYAARYVGPTKVRRLLFIAPRC--KGRELDAYRLALDTLKERGSMNVELYREVVGLVAGRLGPAYQLDSAWADGLEKQAAAQKERLESDLQSSRTSLAKESIRLGYQDLGEFYYARGDLDNALKNFVRTRDYCSMTRHSVDMCLNVIKVAVGLDSFSHVNTYVTKAEHTPDLNDPKARHKLKAAAGLVQLSQQHYTNAARKFLECGVAGLTKDKPNDNAPAPFAQVLAAEDVAVYGGLCALASLDRTELRRRVVDNMAFRGLLDLVPWMRELIYDFCGSKYGGCLRVLGAMKGELMLDLHLARHVSVLYQQIRERCFLQYFSPYLSVDLARMSEAFGAPVGEMEKEVAKLIRSNRLPARVDSQKKTLHRRQVDPREEGYKKVFGMGKDFLREVRAMLLRTSLVEH 511
            I +   D+EAYA+ Y G TK+ RLLFIA +C  +  +L+A R+A D +K+    N +L+REVV  + GRLGPAY++D AWAD ++++A  +KE+LE++L S RT+L KESIR+GY D G+FYYA G L +A KN+VRTRDYC+ ++H + MCLN I V++ +  F+HVN+YV+KAE TPD  DP    KL+ AAGL  L  + Y  AARKFLE G       +  +N    + +V+A +DVA YGGLCALAS DRTEL+ +V+DN+ FR  L+LVP +RELI+DF  S Y  CL  L  +K  L+LD+HL  HV  LY QIR +  +QY  P++SVDL  M+ AF   V  +EKE+  LI  N++ AR+DS  K L+ R  D R   +++V   G +F R+VRAMLLR +L++H
Sbjct:   29 ISSEQMDVEAYASLYSGRTKITRLLFIADQCGNQSMQLEALRMAYDEIKK--GENTQLFREVVQKIDGRLGPAYRMDQAWADNVDRRAEQRKEKLENELNSYRTNLIKESIRMGYNDFGDFYYAHGALGDAFKNYVRTRDYCTTSKHIIQMCLNAILVSIEMGQFTHVNSYVSKAEQTPDALDPVTVAKLRCAAGLAHLDGKKYKLAARKFLETG------PELGNN----YTEVIAPQDVATYGGLCALASFDRTELKNKVIDNLNFRNFLELVPEVRELIHDFYSSHYASCLEYLENLKANLLLDIHLYDHVETLYNQIRHKALIQYTHPFVSVDLRMMASAFKTSVAGLEKELEALITDNQIQARIDSHNKILYARHADQRNATFQRVLQTGSEFDRDVRAMLLRANLLKH 430
[Close]
BLAST of NO05G02670 vs. NCBI_GenBank
Match: XP_008799523.1 (PREDICTED: COP9 signalosome complex subunit 1 [Phoenix dactylifera])

HSP 1 Score: 399.8 bits (1026), Expect = 1.500e-107
Identity = 205/408 (50.25%), Postives = 278/408 (68.14%), Query Frame = 0 
Query:  105 DLEAYAARYVGPTKVRRLLFIAPRC--KGRELDAYRLALDTLKERGSMNVELYREVVGLVAGRLGPAYQLDSAWADGLEKQAAAQKERLESDLQSSRTSLAKESIRLGYQDLGEFYYARGDLDNALKNFVRTRDYCSMTRHSVDMCLNVIKVAVGLDSFSHVNTYVTKAEHTPDLNDPKARHKLKAAAGLVQLSQQHYTNAARKFLECGVAGLTKDKPNDNAPAPFAQVLAAEDVAVYGGLCALASLDRTELRRRVVDNMAFRGLLDLVPWMRELIYDFCGSKYGGCLRVLGAMKGELMLDLHLARHVSVLYQQIRERCFLQYFSPYLSVDLARMSEAFGAPVGEMEKEVAKLIRSNRLPARVDSQKKTLHRRQVDPREEGYKKVFGMGKDFLREVRAMLLRTSLVEH 511
            D+EAYA+ Y G TKV RLLFIA RC  +G +L+A RLA D +K+    + +LYRE    +AGRLGP Y LD AWAD ++++A  +K++LE++L   +T+L KESIR+GY DLG+FYYA G L +A KN+VRTRDYC+ ++H + MCLNVI V++ L  F HV+ YV+KAE TPD  DP    KL+ AAGL  L  + Y  AARKFLE G       +  +N    +A+V+A +DVA YGGLCAL+S DRTEL+ +V+DN+ FR  L+LVP +RELI+DF  S+Y  CL  L  +K  L+LD+HL  HV  LY QIR +  +QY  P++SVDL  M++AF   V  +EKE+  LI  N++ AR+DS  K L+ R  D R   +++V   G +F R+ RAMLLR +L++H
Sbjct:   41 DVEAYASLYTGRTKVTRLLFIADRCGNEGMQLEALRLAYDEIKK--GEDSQLYREAASKIAGRLGPQYTLDQAWADSIDRRAEQRKDKLENELSGYKTNLIKESIRMGYNDLGDFYYAHGQLGDAFKNYVRTRDYCTTSKHIIQMCLNVILVSIELGQFMHVSNYVSKAEQTPDTLDPVTVAKLRCAAGLAYLEAKKYKLAARKFLETG------PELGNN----YAEVIAPQDVATYGGLCALSSFDRTELKNKVIDNINFRNFLELVPEVRELIHDFYASRYASCLEYLENLKPNLLLDIHLHDHVETLYTQIRHKAIIQYTHPFISVDLHTMADAFKTGVAGLEKELEALITDNQIQARIDSHNKILYARHADQRNATFQRVLQTGVEFERDARAMLLRANLIKH 436
[Close]
BLAST of NO05G02670 vs. NCBI_GenBank
Match: XP_002272895.1 (PREDICTED: COP9 signalosome complex subunit 1 [Vitis vinifera] >CBI38768.3 unnamed protein product, partial [Vitis vinifera])

HSP 1 Score: 397.9 bits (1021), Expect = 5.500e-107
Identity = 204/414 (49.28%), Postives = 279/414 (67.39%), Query Frame = 0 
Query:   99 IDAPNFDLEAYAARYVGPTKVRRLLFIAPRCKGR--ELDAYRLALDTLKERGSMNVELYREVVGLVAGRLGPAYQLDSAWADGLEKQAAAQKERLESDLQSSRTSLAKESIRLGYQDLGEFYYARGDLDNALKNFVRTRDYCSMTRHSVDMCLNVIKVAVGLDSFSHVNTYVTKAEHTPDLNDPKARHKLKAAAGLVQLSQQHYTNAARKFLECGVAGLTKDKPNDNAPAPFAQVLAAEDVAVYGGLCALASLDRTELRRRVVDNMAFRGLLDLVPWMRELIYDFCGSKYGGCLRVLGAMKGELMLDLHLARHVSVLYQQIRERCFLQYFSPYLSVDLARMSEAFGAPVGEMEKEVAKLIRSNRLPARVDSQKKTLHRRQVDPREEGYKKVFGMGKDFLREVRAMLLRTSLVEH 511
            I     D+EAYA+ Y G TK+ RLLFIA RC+ R  +++AYR+A D +K+    N +LYREVV  + GRLGP Y LD  W + +E++A  +KE+LE++L + RT+L KESIR+GY D G+FYYA G L +A KN+VRTRDYC+ ++H + MCLN I V++ +  F+HV +YV+KAE TP+  DP    KL+ AAGL  L  + Y  AARKFLE G       +  +N    + +V+A +DVA YGGLCALAS DRTEL+ +V+DN+ FR  L+LVP +RELI+DF  S Y  CL  LG +K  L+LD+HL  HV +LY QIR +  +QY  P++SVDL  M+ AF   V  +EKE+  LI  N++ AR+DS  K L+ R  D R   +++V   G +F R+VRAMLLR +L++H
Sbjct:   30 ISGEALDIEAYASLYSGRTKITRLLFIADRCENRQMQMEAYRMAYDEIKK--GENTQLYREVVQKIDGRLGPQYGLDLVWTESVERRADQRKEKLENELNAYRTNLIKESIRMGYNDFGDFYYAHGLLADAFKNYVRTRDYCTTSKHIIHMCLNAILVSIEMGQFTHVTSYVSKAEQTPEALDPVTVAKLRCAAGLAHLEAKKYKLAARKFLETGA------ELGNN----YTEVIAPQDVATYGGLCALASFDRTELKNKVIDNLNFRNFLELVPEVRELIHDFYSSHYASCLDYLGNLKTNLLLDIHLHDHVEMLYNQIRHKALIQYTHPFVSVDLRMMANAFKTSVAGLEKELEALITDNQIQARIDSHNKILYARHADQRNATFQRVLQTGNEFDRDVRAMLLRANLLKH 431
[Close]
BLAST of NO05G02670 vs. NCBI_GenBank
Match: XP_010919243.1 (PREDICTED: COP9 signalosome complex subunit 1 [Elaeis guineensis])

HSP 1 Score: 394.4 bits (1012), Expect = 6.100e-106
Identity = 203/408 (49.75%), Postives = 277/408 (67.89%), Query Frame = 0 
Query:  105 DLEAYAARYVGPTKVRRLLFIAPRC--KGRELDAYRLALDTLKERGSMNVELYREVVGLVAGRLGPAYQLDSAWADGLEKQAAAQKERLESDLQSSRTSLAKESIRLGYQDLGEFYYARGDLDNALKNFVRTRDYCSMTRHSVDMCLNVIKVAVGLDSFSHVNTYVTKAEHTPDLNDPKARHKLKAAAGLVQLSQQHYTNAARKFLECGVAGLTKDKPNDNAPAPFAQVLAAEDVAVYGGLCALASLDRTELRRRVVDNMAFRGLLDLVPWMRELIYDFCGSKYGGCLRVLGAMKGELMLDLHLARHVSVLYQQIRERCFLQYFSPYLSVDLARMSEAFGAPVGEMEKEVAKLIRSNRLPARVDSQKKTLHRRQVDPREEGYKKVFGMGKDFLREVRAMLLRTSLVEH 511
            D+EAY + Y G TKV RLLFIA RC  +G +L+A RLA D +K+    + +LYR+V   +AGRLGP Y LD AWADG++++A  +K++LE++L   +T+L KESIR+GY DLG+FYYA G L +A KN+VRTRDYC+ ++H + MCLNVI V++ L  F HV+ YV+KAE TPD+ D     KL+ AAGL  L  + Y  AARKFLE G       +  +N    + +V+A +DVA YGGLCAL+S DR+EL+ +V+DN+ FR  L+LVP +RELI+DF  S Y  CL  L  +K  L+LD+HL  HV  LY QIR +  +QY  P++SVDL  M+ AF   V  +EKE+  LI  N++ AR+DS  K L+ R  D R   +++V   G +F R+VRAMLLR +L++H
Sbjct:   41 DVEAYGSLYTGRTKVIRLLFIADRCGNEGMQLEALRLAYDEIKK--GEDSQLYRDVASKIAGRLGPQYDLDQAWADGIDRRAEQRKDKLENELNGYKTNLIKESIRMGYNDLGDFYYAHGQLGDAFKNYVRTRDYCTTSKHIIHMCLNVILVSIELGQFMHVSNYVSKAEQTPDMLDAVTVAKLRCAAGLAYLEAKKYKLAARKFLETG------PELGNN----YTEVIAPQDVATYGGLCALSSFDRSELKSKVIDNINFRNFLELVPEVRELIHDFYASHYASCLEYLENLKPNLLLDIHLHDHVETLYTQIRHKAIIQYTHPFISVDLHTMASAFKTGVAGLEKELEALITDNQIQARIDSHNKILYARHADQRNTTFQRVLQTGVEFERDVRAMLLRANLIKH 436
[Close]
BLAST of NO05G02670 vs. NCBI_GenBank
Match: XP_010933872.1 (PREDICTED: COP9 signalosome complex subunit 1 [Elaeis guineensis])

HSP 1 Score: 393.3 bits (1009), Expect = 1.400e-105
Identity = 204/408 (50.00%), Postives = 277/408 (67.89%), Query Frame = 0 
Query:  105 DLEAYAARYVGPTKVRRLLFIAPRC--KGRELDAYRLALDTLKERGSMNVELYREVVGLVAGRLGPAYQLDSAWADGLEKQAAAQKERLESDLQSSRTSLAKESIRLGYQDLGEFYYARGDLDNALKNFVRTRDYCSMTRHSVDMCLNVIKVAVGLDSFSHVNTYVTKAEHTPDLNDPKARHKLKAAAGLVQLSQQHYTNAARKFLECGVAGLTKDKPNDNAPAPFAQVLAAEDVAVYGGLCALASLDRTELRRRVVDNMAFRGLLDLVPWMRELIYDFCGSKYGGCLRVLGAMKGELMLDLHLARHVSVLYQQIRERCFLQYFSPYLSVDLARMSEAFGAPVGEMEKEVAKLIRSNRLPARVDSQKKTLHRRQVDPREEGYKKVFGMGKDFLREVRAMLLRTSLVEH 511
            D+EAYA+ Y+G TKV RLLF+A RC  +G +L+A RLA D +K+ G  +  LYREV G +AGRLGP Y LD AWAD ++++A  +K++L+++L   RT+L KESIR+GY DLG+FYYA G L +A KN+VRTRDYC+ ++H + MCLNVI V++ L  F HV+ YV KAE TP+  D     KL+ AAGL  L  + Y  AARKFLE G       +  +N    + +V+A +DVA YGGLCALAS DRTEL+ +V+DN+ FR  L+LVP +RELI+DF  S+Y  CL  L  +K  L+LD+HL  HV  LY QIR +  +QY  P+ SVDL  M+ AF   V  +EKE+  LI  N++ AR+DS  K L+ R  D R   +++V   G +F R+V+A+LLR +L++H
Sbjct:   42 DVEAYASLYIGRTKVMRLLFMAERCGNEGMQLEALRLAYDEIKKGGDSH--LYREVAGKIAGRLGPQYTLDQAWADAIDRRAEQRKDKLDNELNGYRTNLIKESIRMGYNDLGDFYYAHGQLGDAFKNYVRTRDYCTTSKHIIQMCLNVILVSLELGQFLHVSNYVGKAEQTPESLDSITAAKLRCAAGLAYLEAKKYKLAARKFLETG------PELGNN----YTEVIAPQDVATYGGLCALASFDRTELKNKVIDNINFRNFLELVPEVRELIHDFYASRYASCLEYLENLKPNLLLDIHLHDHVEALYTQIRHKAIIQYTHPFSSVDLHTMAGAFKTNVSGLEKELEALITDNQIQARIDSHNKILYARHADQRNATFQRVRQTGVEFERDVKALLLRANLIKH 437
[Close]
BLAST of NO05G02670 vs. NCBI_GenBank
Match: PIA49569.1 (hypothetical protein AQUCO_01300395v1, partial [Aquilegia coerulea])

HSP 1 Score: 391.3 bits (1004), Expect = 5.200e-105
Identity = 201/421 (47.74%), Postives = 279/421 (66.27%), Query Frame = 0 
Query:   99 IDAPNFDLEAYAARYVGPTKVRRLLFIAPRCKGR--ELDAYRLALDTLKERGSMNVELYREVVGLVAGRLGPAYQLDSAWADGLEKQAAAQKERLESDLQSSRTSLAKESIRLGYQDLGEFYYARGDLDNALKNFVRTRDYCSMTRHSVDMCLNVIKVAVGLDSFSHVNTYVTKAEHTPDLNDPKARHKLKAAAGLVQLSQQHYTNAARKFLECGVAGLTKDKPNDNAPAPFAQVLAAEDVAVYGGLCALASLDRTELRRRVVDNMAFRGLLDLVPWMRELIYDFCGSKYGGCLRVLGAMKGELMLDLHLARHVSVLYQQIRERCFLQYFSPYLSVDLARMSEAFGAPVGEMEKEVAKLIRSNRLPARVDSQKKTLHRRQVDPREEGYKKVFGMGKDFLREVRAMLLRTSLVEHGVCVDGG 518
            I +   D+EAYA+ Y G TK+ RLLFIA RC  +  EL+A R+A D +K+    N +L+REVV  + GRLGP+Y +D +WAD ++++A  +K++LE++L + +T+L KESIR+GY D G+F+YA G L +A KN+ RTRDYC+  +H + MCLN I V + +  F+HV   VTKAE +PDL DP    KL+ A+GL  L  + Y +AARKFLE     +T D  N+     +  V+A +DVA YGGLCALAS DRTEL+ +V+DN+ FR  L+LVP +RE+I DF  S Y  CL  L  +K  L+LD+HL  H+  LY QIR +  +QY  P++SVDL  M+ AF   V  +EKE+  LI  N++ AR+DS  K L+ R  D R   +++V  MG DF R+V+AMLLR +L++H   V GG
Sbjct:   38 ISSEQLDVEAYASLYSGRTKISRLLFIADRCGNQTMELEALRMAYDEIKK--GENTQLFREVVQKIDGRLGPSYVMDQSWADSVDRRAEIRKDKLENELNAYKTNLIKESIRMGYNDFGDFFYAHGSLQDAFKNYSRTRDYCTTPKHIIQMCLNTILVGIEMGQFTHVINSVTKAEQSPDLVDPVIIAKLRCASGLACLENKKYKHAARKFLE-----ITPDLANN-----YTDVIAPQDVATYGGLCALASFDRTELKNKVIDNLNFRNFLELVPEVREIINDFYSSHYASCLEYLNNLKANLLLDIHLHDHIETLYNQIRHKALIQYTLPFVSVDLNMMAGAFKTSVAGLEKELEALITDNQIQARIDSHNKILYARHADQRNATFQRVLKMGNDFDRDVKAMLLRANLLKHEYNVRGG 446
[Close]
BLAST of NO05G02670 vs. NCBI_GenBank
Match: CAN74681.1 (hypothetical protein VITISV_025856 [Vitis vinifera])

HSP 1 Score: 389.8 bits (1000), Expect = 1.500e-104
Identity = 204/424 (48.11%), Postives = 279/424 (65.80%), Query Frame = 0 
Query:   99 IDAPNFDLEAYAARYVGPTKVRRLLFIAPRCKGR--ELDAYRLALDTLKERGSMNVELYREVVGLVAGRLGPAYQLDSAWADGLEKQAAAQKERLESDLQSSRTSLAKESIRLGYQDLGEFYYARGDLDNALKNFVRTRDYCSMTRHSVDMCLNVIKVAVGLDSFSHVNTYVTKAEHTPDLNDPKARHKLKAAAGLVQLSQQHYTNAARKFLECGVAGLTKDKPNDNAPAPFAQVLAAEDVAVYGGLCALASLDRTELR----------RRVVDNMAFRGLLDLVPWMRELIYDFCGSKYGGCLRVLGAMKGELMLDLHLARHVSVLYQQIRERCFLQYFSPYLSVDLARMSEAFGAPVGEMEKEVAKLIRSNRLPARVDSQKKTLHRRQVDPREEGYKKVFGMGKDFLREVRAMLLRTSLVEH 511
            I     D+EAYA+ Y G TK+ RLLFIA RC+ R  +++AYR+A D +K+    N +LYREVV  + GRLGP Y LD  W + +E++A  +KE+LE++L + RT+L KESIR+GY D G+FYYA G L +A KN+VRTRDYC+ ++H + MCLN I V++ +  F+HV +YV+KAE TP+  DP    KL+ AAGL  L  + Y  AARKFLE G       +  +N    + +V+A +DVA YGGLCALAS DRTEL+           +V+DN+ FR  L+LVP +RELI+DF  S Y  CL  LG +K  L+LD+HL  HV +LY QIR +  +QY  P++SVDL  M+ AF   V  +EKE+  LI  N++ AR+DS  K L+ R  D R   +++V   G +F R+VRAMLLR +L++H
Sbjct:   30 ISGEALDIEAYASLYSGRTKITRLLFIADRCENRQMQMEAYRMAYDEIKK--GENTQLYREVVQKIDGRLGPQYGLDLVWTESVERRADQRKEKLENELNAYRTNLIKESIRMGYNDFGDFYYAHGLLADAFKNYVRTRDYCTTSKHIIHMCLNAILVSIEMGQFTHVTSYVSKAEQTPEALDPVTVAKLRCAAGLAHLEAKKYKLAARKFLETGA------ELGNN----YTEVIAPQDVATYGGLCALASFDRTELKASIECFSFSINKVIDNLNFRNFLELVPEVRELIHDFYSSHYASCLDYLGNLKTNLLLDIHLHDHVEMLYNQIRHKALIQYTHPFVSVDLRMMANAFKTSVAGLEKELEALITDNQIQARIDSHNKILYARHADQRNATFQRVLQTGNEFDRDVRAMLLRANLLKH 441
[Close]
BLAST of NO05G02670 vs. NCBI_GenBank
Match: NP_001149716.1 (fusca homolog [Zea mays] >ACG36499.1 COP9 signalosome complex subunit 1 [Zea mays])

HSP 1 Score: 389.4 bits (999), Expect = 2.000e-104
Identity = 199/414 (48.07%), Postives = 285/414 (68.84%), Query Frame = 0 
Query:   99 IDAPNFDLEAYAARYVGPTKVRRLLFIAPRC--KGRELDAYRLALDTLKERGSMNVELYREVVGLVAGRLGPAYQLDSAWADGLEKQAAAQKERLESDLQSSRTSLAKESIRLGYQDLGEFYYARGDLDNALKNFVRTRDYCSMTRHSVDMCLNVIKVAVGLDSFSHVNTYVTKAEHTPDLNDPKARHKLKAAAGLVQLSQQHYTNAARKFLECGVAGLTKDKPNDNAPAPFAQVLAAEDVAVYGGLCALASLDRTELRRRVVDNMAFRGLLDLVPWMRELIYDFCGSKYGGCLRVLGAMKGELMLDLHLARHVSVLYQQIRERCFLQYFSPYLSVDLARMSEAFGAPVGEMEKEVAKLIRSNRLPARVDSQKKTLHRRQVDPREEGYKKVFGMGKDFLREVRAMLLRTSLVEH 511
            + A   D+EAYAA+Y G T++ RLLF+A RC  +  +L+A R+A D +K RG  +V+L+R+VV  + GRLGP Y LD AW   + ++A  +KE+LES+L   RT+L KESIR+GY D+G+F+YA G L +A K+++RTRDYC+ ++H V MC+NVI V++ L  ++HV+ YV+KAE TPD  DP    KLKAAAGL  L  + Y  AARKF+E G+      +  +N    F++V+A +DVAVYG LCALAS DR++L+ +V+DN+ FR  LDLVP +REL+ DF  S+YG CL  L  +K  L+LD+HL +HV  LY +IR +  +QY  P++SVDL  M+ AF   V  ++KE+A LI  +++ AR+DS  K L+ R  D R   +++V   G DF R+V++MLLR +L++H
Sbjct:   32 VSAEQLDVEAYAAQYSGRTRLVRLLFVADRCGVEAMQLEALRMAYDEIK-RGE-DVQLHRDVVTKIGGRLGPRYGLDQAWVFSVSRRADQRKEKLESELNGYRTNLIKESIRMGYNDIGDFFYAHGQLSDAFKSYIRTRDYCTTSKHIVQMCMNVILVSIELGQYAHVSNYVSKAEQTPDSLDPTIVAKLKAAAGLANLETKKYKFAARKFVETGI------ELGNN----FSEVIAPQDVAVYGALCALASFDRSDLKSKVIDNINFRNFLDLVPEVRELVNDFYASRYGSCLGHLEKLKPNLLLDIHLHQHVETLYMEIRHKAIIQYTLPFISVDLNTMAAAFKTSVSMLQKELAALITEDKIQARIDSHNKILYARHADQRNATFQRVLQTGNDFERDVKSMLLRANLLKH 433
The following BLAST results are available for this feature:
BLAST of NO05G02670 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Position :
0
Zoom :
x 1
500100015002000250030003500Expect = 6.90e-174 / Id = 71.43Expect = 1.50e-168 / Id = 71.05Expect = 3.80e-108 / Id = 49.52Expect = 1.50e-107 / Id = 50.25Expect = 5.50e-107 / Id = 49.28Expect = 6.10e-106 / Id = 49.75Expect = 1.40e-105 / Id = 50.00Expect = 5.20e-105 / Id = 47.74Expect = 1.50e-104 / Id = 48.11Expect = 2.00e-104 / Id = 48.07SequenceEWM28121.1EWM28122.1XP_010255512.1XP_008799523.1XP_002272895.1XP_010919243.1XP_010933872.1PIA49569.1CAN74681.1NP_001149716.1
Match NameE-valueIdentityDescription
EWM28121.16.900e-17471.43fusca protein fus6 [Nannochloropsis gaditana][more]
EWM28122.11.500e-16871.05fusca protein fus6 [Nannochloropsis gaditana][more]
XP_010255512.13.800e-10849.52PREDICTED: COP9 signalosome complex subunit 1 [Nel... [more]
XP_008799523.11.500e-10750.25PREDICTED: COP9 signalosome complex subunit 1 [Pho... [more]
XP_002272895.15.500e-10749.28PREDICTED: COP9 signalosome complex subunit 1 [Vit... [more]
XP_010919243.16.100e-10649.75PREDICTED: COP9 signalosome complex subunit 1 [Ela... [more]
XP_010933872.11.400e-10550.00PREDICTED: COP9 signalosome complex subunit 1 [Ela... [more]
PIA49569.15.200e-10547.74hypothetical protein AQUCO_01300395v1, partial [Aq... [more]
CAN74681.11.500e-10448.11hypothetical protein VITISV_025856 [Vitis vinifera... [more]
NP_001149716.12.000e-10448.07fusca homolog [Zea mays] >ACG36499.1 COP9 signalos... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL083nonsL083Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR092ncniR092Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR121ngnoR121Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR117ngnoR117Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003601NSK003601Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO05G02670.1NO05G02670.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|553582gene_3070Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100036g40gene2433Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO05G02670.1NO05G02670.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO05G02670 ID=NO05G02670|Name=NO05G02670|organism=Nannochloropsis oceanica|type=gene|length=3780bp
TTGTTGTTGTTGTTGTTGTTGTTGCTGCTGCTGCTTGAAGAATTCTTCCC
ACATTTGGAGCACGGTCCATCCTGCTACTAAAGCCCAGAGGTGAGCGCTG
TCTCTGGCGCTGACATCACCGACAACCCCCTCCGAATCTGCGGTTGGTGG
TGGCGGCGAGTGAGGGGGTAGCAAGCGCAGTAATGTCTGGTGCTGTAGGA
TGATGAAGGCGTAGGTGCGTTGAAACAGCTCAGAATACCGACTCAACTGC
AGTAAGAGGCCCGCTTCCCGTGCAAAGAGGTACTGCTGTACTTCGAGCAT
CCCAATGCTGCTCCCTGACTTCTCGCTGCCTTCTTGCCCCGTCGTTGCCC
CGAGCTTCGCTCGAAATTCAAAGACGGGAAAATCCAATACGGGAACACCA
CCACCGGCCATCGCGTTCATCCCACCACCTCTACCACCACTAGAAGAAGC
CACTCGACTGGGCTGAAACATCATCAGGGTCTTGGGCGGCATGATCACGC
TATTTCCACTACTACTACCACTACTACTACTACTACTACTACTACTCCTC
CTCCTACTGCTGCTGCTGCTGCTGCTGCTGCTGCTTCTACCACTACTACC
ACCACCACCACCACCACCACCACTACTCCTCCCAAAGTCGGCAGCAGAAG
AGGGCATCAGAGCCGCTTGCCAGCGATTGGTTAAAGCAGACAATTCCTGA
TAATGATGCAAAGCCTCCCCCGGAAGCTGAAGTTGCTCATTCATCAATGC
CAAGCTCTCCTTGGCAAAAAACAAGCGGAAAAAGAAATCTTCCCCAGGGG
CAGCAGCAGCAGCAGCAGCAGTGGCAGTACGACTAGAGGCCCCTTCCTCC
AACTCACGGACCTGCTCCTGATAAGCCTTCGAACGGGCAATAAATGTGTT
CCCCACTACCGTCTTAATTTTCGCCATAACATCCCCCCACTGCTCCTGAT
GATTCTGCTGCAGAATGATGCCGTTCCCCGCCCCGGTACCTGCGGGCCCT
CGCCCCCCCATGGAACCCGACACACCCTGCTCAAACAGCGTCAACATACT
CGACCGGTCCCCCGTCACTTTGCTACAAAAGTCCGCCGCTATCCTCGAAT
AAATCTTGAGGTATATATCATGCGTGTTGTTCTGCGTGCCCAAGGGGACA
TAGACCAACAACCATTCTTCGTGCCGCTCTGTTCGCTCGTCGACCCAGGC
CTTGACCTTGGCCTTTACAGCGGTCTTGTACGCCTCGGTCGTCTCACAAA
CCACTAGATTTAGATGCGCATATGGAGCGCGATAATCGCTCGTACGACCT
CCGTCTCGTCCTCCCAGGTTTCTGAAGAGGGCATGGTCGTGGGCTACCAC
TTGCACAGGCAGCCTCGAGATCGTGACGAGGGTGCTGCCCGAGGTGCCCG
AAGGCAGCCGGGTGCGCCAAGCTACATCTCTCAGGGGAAGTTGCGCCTTA
AAATACCGCTCCAAAAACTGCCAGACTTGTCCGAGCTCGTCATGGTAGGC
CAAGGCACACACGGTGGAGGTGGTTGGAGTGGTGGAGTGGGAGGCAGAGT
TGGAGGAGAGGGAGGACTTTGGGCCAGAGGAGGAGAGCAGTGGAGGCGGA
TGCAACGGCCGTGGGGGCGGGTCCATGGCCTTGATATATCGTACCCTGCT
GCTGCGCTGAGGACGAGATAGTGAGAAACGCACGTAAAAGTGAGAACAAC
AGAGTTGTTGTGTTGAGCAAGGGCATGGTGAAGAAGCAAGAGCGAACGTC
GCGCCTCCTCTCGCCGGACGCGCTTGAGGTTTGTTCCAAGACCCACATAT
CGCAACCCTTACCACACACCACAGACAAATATCAGCCTCAAATGCAAGCG
GCAGCGCCCAACGTGGAGGAGAGGGACATGGAGGTAGTGGACGCCAACGC
TCTTGACGCGGAAGAGGGAGGAGGTGAGGGTGCTCATTCAGCCTCGTCCT
CGGCTGCACCAGCAGCCCAAACCTGCAGCACAAACAACACGAGCAGCAGT
AGATGCGGCAGCGATGACATTGATGCGCCCAATTTCGgtacgtttttgat
agtgacgctgggtgtctcgagtaaagagtcaatgttgactctccccttgt
gcctcctatcatttttcgtaagacttcctctcttcttattctgtgcccgc
gccccgcctttccacaaacccgcctcgcgctccccgccacttggctactt
tttaccaggcctgcgtgctctcttcctttatttgttcctacccattaacc
cggtcgcccaccttcctctctgtacccccaatccttttaatcccaccctt
tttagACCTCGAAGCCTACGCGGCCAGGTACGTTGGCCCCACCAAGGTCC
GTCGCCTACTCTTTATTGCGCCCCGTTGCAAGGGTCGGGAGCTGGACGCG
TACCGCCTTGCCTTGGATACCCTGAAAGAGCGGGGATCGATGAATGTGGA
GCTGTACCGGGAGGTGGTGGGTTTGGTTGCTGGCCGTTTAGGTCCTGCGT
ATCAGCTGGACTCTGCATGGGCGGATGGGCTTGAGAAGCAGGCAGCGGCA
CAGAAGGAACGGTTAGAGAGTGATTTGCAGAGTTCGCGGACGAGTTTGGC
GAAGGAGAGCATTCGATTGGGGTATCAAGATTTGGGGGAATTTTATTATG
CCCGTGGTGATTTGGATAATGCCTTGAAGAACTTTGTCCGTACCCGGGAC
TACTGCTCCATGACCCGTCATAGCGTCGATATGTGCCTGAACGTGATCAA
GGTGGCCGTGGGGCTCGACAGCTTCTCGCATGTCAACACCTACGTCACGA
AAGCCGAACATACCCCTGACTTGAACGATCCCAAGGCCCGGCACAAGCTC
AAGGCTGCCGCCGGGCTCGTTCAACTCTCCCAACAGCACTATACGAACGC
TGCACGGAAATTTCTTGAATGTGGGGTTGCGGGGCTGACGAAGGATAAGC
CTAACGATAATGCTCCTGCTCCCTTCGCTCAGGTCCTGGCTGCGGAGGAC
GTGGCGGTGTATGGGGGGTTGTGCGCGTTGGCCTCGCTTGATCGGACGGA
ACTGCGACGACGGGTGGTGGATAACATGGCTTTTAGGGGCTTACTAGATC
TGGTCCCATGGATGCGGGAGCTGATTTATGATTTCTGTGGCTCGAAGTAT
GGGGGCTGCTTGAGGGTCTTGGGTGCGATGAAGGGGGAGTTAATGCTGGA
CTTACATCTAGCACGGCATGTGAGTGTTTTATACCAGCAGATACGCGAGA
GATGCTTCTTGCAGTATTTTTCGCCGTATCTGAGCGTGGACTTGGCGAGG
ATGAGCGAGGCCTTTGGTGCGCCGGTGGGGGAGATGGAAAAGGAGGTGGC
CAAATTGATCCGGAGTAATCGGTTGCCGGCACGTGTGGACAGTCAGAAGA
AGACATTGCACAGGCGTCAGGTGGACCCGAGGGAGGAGGGGTATAAGAAA
GTGTTTGGGATGGGCAAGGATTTCCTGAGGGAGGTGAGGGCGATGCTGTT
GAGAACGAGTTTGGTGGAGCATGGGGTGTGTGTGGATGGAGGAGGAGTGG
GAGGGAGGGAGGGAGGAAGAAGGGGGTTTCTGGCTGGTGGGCGTTTGAGC
CAGTCGCATTCGATGGGAATCACGGGGGGCTTTGTGGGTGGGAGAGGGAG
GGGTGGGGGGAGGGAGGGGAGGATGGAAGGGGAGAGTTCGGCGGAGGAGG
AGGAGGGAGAGGAGGAGGAGGAGGAGGAGGAGATGATGGAGGGAGGGGAT
GAGCACCATGGGTGTGGGGGGGGGGGGTAG
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protein sequence of NO05G02670.1

>NO05G02670.1-protein ID=NO05G02670.1-protein|Name=NO05G02670.1|organism=Nannochloropsis oceanica|type=polypeptide|length=596bp
MVKKQERTSRLLSPDALEVCSKTHISQPLPHTTDKYQPQMQAAAPNVEER
DMEVVDANALDAEEGGGEGAHSASSSAAPAAQTCSTNNTSSSRCGSDDID
APNFDLEAYAARYVGPTKVRRLLFIAPRCKGRELDAYRLALDTLKERGSM
NVELYREVVGLVAGRLGPAYQLDSAWADGLEKQAAAQKERLESDLQSSRT
SLAKESIRLGYQDLGEFYYARGDLDNALKNFVRTRDYCSMTRHSVDMCLN
VIKVAVGLDSFSHVNTYVTKAEHTPDLNDPKARHKLKAAAGLVQLSQQHY
TNAARKFLECGVAGLTKDKPNDNAPAPFAQVLAAEDVAVYGGLCALASLD
RTELRRRVVDNMAFRGLLDLVPWMRELIYDFCGSKYGGCLRVLGAMKGEL
MLDLHLARHVSVLYQQIRERCFLQYFSPYLSVDLARMSEAFGAPVGEMEK
EVAKLIRSNRLPARVDSQKKTLHRRQVDPREEGYKKVFGMGKDFLREVRA
MLLRTSLVEHGVCVDGGGVGGREGGRRGFLAGGRLSQSHSMGITGGFVGG
RGRGGGREGRMEGESSAEEEEGEEEEEEEEMMEGGDEHHGCGGGG*
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Synonyms
Publications