Naga_100004g159, gene2404 (gene) Nannochloropsis gaditana

Overview
NameNaga_100004g159
Unique Namegene2404
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002459.1:558300..561029 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100004g159
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002459.1supercontigCM002459.1:558300..561029 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005198structural molecule activity
GO:0005488binding
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
GO:0009987cellular process
Vocabulary: Cellular Component
TermDefinition
GO:0005635nuclear envelope
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL118ngnoL118Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO05G02340NO05G02340Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna2516rna2516-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna2515rna2515-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna2516rna2516Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna2515rna2515Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna2516

>rna2516-protein ID=rna2516-protein|Name=rna2516|organism=Nannochloropsis gaditana|type=polypeptide|length=351bp
MSFGSAAPNAFSFGGTTSTPFSSAAGNTSTFGAAPSVSSALGATPSSIQT
SHGASPGATSSAAPPNDQGFTGDTTFSSLPQYMQLRVWELHKLVRQHREY
ADSLNKFTTPSYSLDRFTKRLKLDILRVQNSHAEISLVASELRKQVEQLR
GFTQKLQAAENGALQYGTPRAAGVETLRQSQQSHASILKEIAIQCEARLQ
EYDAHIQELYHKVVASRTVGGSDGFGGLSREFTPDQLATLIRLQNDALLK
VAAQVAVVHEMVERLRSEWNSRTGQDPFQEMDRLAAQNEERKRKTNRLMI
RSPQEQLRQSIGLSQTSIAPSFTSPPLAQPASNTSAGFSSFLPSTSASNT
M
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protein sequence of rna2515

>rna2515-protein ID=rna2515-protein|Name=rna2515|organism=Nannochloropsis gaditana|type=polypeptide|length=250bp
MVHTLTLSLPCPLNYRGQRLKLDILRVQNSHAEISLVASELRKQVEQLRG
FTQKLQAAENGALQYGTPRAAGVETLRQSQQSHASILKEIAIQCEARLQE
YDAHIQELYHKVVASRTVGGSDGFGGLSREFTPDQLATLIRLQNDALLKV
AAQVAVVHEMVERLRSEWNSRTGQDPFQEMDRLAAQNEERKRKTNRLMIR
SPQEQLRQSIGLSQTSIAPSFTSPPLAQPASNTSAGFSSFLPSTSASNTM
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Synonyms
Publications