Naga_100002g53, gene1877 (gene) Nannochloropsis gaditana

Overview
NameNaga_100002g53
Unique Namegene1877
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002458.1:588626..591174 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100002g53
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:588626..591174 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL106ngnoL106Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO04G03370NO04G03370Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna1965rna1965-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna1966rna1966-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna1965rna1965Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna1966rna1966Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna1965

>rna1965-protein ID=rna1965-protein|Name=rna1965|organism=Nannochloropsis gaditana|type=polypeptide|length=292bp
MKNTRSLAFGAVLLVLVAAAEEGFMDKAADKIKHVVGLETAEEAPKYEAY
EKGRGTVKHGEDVMERAKEKIGNIFHHHAKEPADLIMQEAKYQANEQANA
VKAHGHGIYDTVKETVTAPFHSAKEKSQEMAESAHERAEAGVGCANEAMK
EARRQGMQGYETTKGKTEETIQKGQSKIRQMKDNVENMLQQGKEKVDENI
EAVKGVTGEKIEHAKEYAHEVKQKGEEGAAFKNGIKDETMGSGETLVGTA
TRKMKEVFGGEHVNRKGQNAMDTVEEKSREAMDRAKEGVEEL
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protein sequence of rna1966

>rna1966-protein ID=rna1966-protein|Name=rna1966|organism=Nannochloropsis gaditana|type=polypeptide|length=303bp
MKNTRSLAFGAVLLVLVAAAEEGFMDKAADKIKHVVGLETAEEAPKYEAY
EKGRGTVKHGEDVMERAKEKIGNIFHHHAKEPADLIMQEAKYQANEQANA
VKAHGHGIYDTVKETVTAPFHSAKEKSQEMAESAHERAEAGVGCANEAMK
EARRQGMQGYETTKGKTEETIQKGQSKIRQMKDNVENMLQQGKEKVDENI
EAVKGVTGEKIEHAKEYAHEVKQKGEEGAAFKNGIKDETMGSGETLVGTA
TRKMKEVFGGEHVNRKGQNAMDTVEEKSREAMDRAKVRDLTDLEAVLFLI
SCF
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Synonyms
Publications