Naga_100013g29, gene179 (gene) Nannochloropsis gaditana

Overview
NameNaga_100013g29
Unique Namegene179
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:489980..493929 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100013g29
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:489980..493929 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL002ngnoL002Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL000ngnoL000Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO02G01730NO02G01730Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna188rna188-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna188rna188Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna188

>rna188-protein ID=rna188-protein|Name=rna188|organism=Nannochloropsis gaditana|type=polypeptide|length=921bp
MSSASTAHTSRPDVQAPSSAATFPAPPPPPTSEPRSASTGVARYHVECDH
HDASRKAAMGVWVMSVAQAQPGSQPQIPRPRREGQVHQQQQQQRQQPQQQ
QQQQQQQQPHQDRQGHSQHQEGDASAAIDSLRAALVVLQEENANLRTHNF
DLSASLVMEEAEQSRLRQDMKKLESEKAFMAQEVREADRMRARAEKEKEL
QRQQHCNQPGAREEMSLSSGSGNEQEGMGKKEKKRRIVGREDGLSASGRG
ASQLSEHKEIGREEMEDAGPDGRKNETSTASDAIVEENDLHACEEALAAL
KCPVPSTSLVLQSLVESLCLLLSTGTPHVRRNNEDTRQMECWWSSAFKEE
TGHSQVLARSLGHNFPTHVRHFGKEADGATEATGGRRFVPLSAFSSSGTC
DASIREGLTNGDNSTMNCSIASSMATQLYLSLWPISSSLFFSPSTSHLMP
DVQQDTDMSSSMLLPIIQSLGAMFPQMHALGTDKVVAALRVARCLLSLCP
GESREMALVSGGHENEGENADRKGDKDTCSSSFMQRFQGSKVDAELLRWA
ATGGMDGEGARQGGSGNKEAIGSFLNRLLELIDWVGEHWKDGHPSYDSTD
PSFPLLQMTSEALAVLLVLCQERNGCFSSLGSFGFSSCWATAWLRRPTLP
LLLEGALRARHVELVDLCLQLTHALSQQSPRLFQALAGLKSGAFLSNVAC
QVFDWHLESMTWPIEGKRGRRARSGETIPFEYKGEKRTSQIDGCEMVPRK
SRLQSPTSSPHSASGLERLCLRMTRFLSRVCISYGTSAVHVFLHAPLLDN
EDKNYSLNHTDTGMQNGHILARLVGVVHQAIHRLLRRTGNPSFFPSDTSQ
EQWQLQRMLARESFELLSLLSANNPAGLSAGLDGSGCRWTLEAVNFRLMN
SLVEGLEDLTDEAENLHMSLQ
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Synonyms
Publications