Naga_100556g1, gene1636 (gene) Nannochloropsis gaditana

Overview
NameNaga_100556g1
Unique Namegene1636
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:1283325..1286920 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100556g1
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:1283325..1286920 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL091ngnoL091Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO01G00500NO01G00500Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna1700rna1700-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna1699rna1699-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna1700rna1700Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna1699rna1699Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna1700

>rna1700-protein ID=rna1700-protein|Name=rna1700|organism=Nannochloropsis gaditana|type=polypeptide|length=357bp
MFPKPQKKDNIMASVDLISGLYGVLLAFGIMLLAVLLLPLVVYLISRKPY
PTLKTLSSTKTLGGVLVTGASTGIGRHAAFYLARQGFLVFAGVRKPADGE
ALLRAYLDEESKQTSKSRSRGKVSPAKQGVLHFLILDITKPFQIAAAVRS
VQEELSRRGGLPFLGLVNNAGVTGGADPVEFLPLEHNRNTFEVNFYGPLA
VTQAFLPLLRQAPQGRIVNVSSMAGIVTRPLGATYSCTKFALEALSDTLR
VELGHLGVSVSVIQPGYIRSEIFGKADEQHQHRMQELPVECSALYGHLYT
VDKTNALIAKASDPIVCSRAIHHALTSPYPKVSLLWIRRACGRRSSCFRI
YPQERFY
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protein sequence of rna1699

>rna1699-protein ID=rna1699-protein|Name=rna1699|organism=Nannochloropsis gaditana|type=polypeptide|length=372bp
MFPKPQKKDNIMASVDLISGLYGVLLAFGIMLLAVLLLPLVVYLISRKPY
PTLKTLSSTKTLGGVLVTGASTGIGRHAAFYLARQGFLVFAGVRKPADGE
ALLRAYLDEESKQTSKSRSRGKVSPAKQGVLHFLILDITKPFQIAAAVRS
VQEELSRRGGLPFLGLVNNAGVTGGADPVEFLPLEHNRNTFEVNFYGPLA
VTQAFLPLLRQAPQGRIVNVSSMAGIVTRPLGATYSCTKFALEALSDTLR
VELGHLGVSVSVIQPGYIRSEIFGKADEQHQHRMQELPVECSALYGHLYT
VDKTNALIAKASDPIVCSRAIHHALTSPYPKTRYLVGNVNGTPAYWLGWG
IWLLNDRLMDRMITPPFKKGAL
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Synonyms
Publications