Naga_100007g15, gene1500 (gene) Nannochloropsis gaditana

Overview
NameNaga_100007g15
Unique Namegene1500
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:929649..931900 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100007g15
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:929649..931900 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL091ngnoL091Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna1558rna1558-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna1559rna1559-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna1558rna1558Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna1559rna1559Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna1558

>rna1558-protein ID=rna1558-protein|Name=rna1558|organism=Nannochloropsis gaditana|type=polypeptide|length=346bp
MLDMTTIFAMFGNVGSVVGVVIMNKYIVAVDAFNFMIFLSFTHFVFTYLG
CSVLLHLGFFNYKPAPIRGVLPVALGSLGSVAFMNLNLAHNSVGFYQLSK
LACIPVTIALERAFYGKTVPGPVLVTLIPITIGVGIATVNDVSVNLVGTA
FAALAVLFTSLAQIFTSTYQKQLDCDALQLLYHSSPLIAAGSFLMIPFFD
NVRYLVQTSISLSLLNHVLSSCVLALGVNISNYLVLGKTSPLTYQVLGHL
KTILILVLGFVVFKYKSNARAVVGILIALGGVIAYTELKRRMSLQQGGRA
GMSSSHSGLRRGFEGLSYSKVAADEEIPDGEIGGAGRLELMGAMKV
back to top

protein sequence of rna1559

>rna1559-protein ID=rna1559-protein|Name=rna1559|organism=Nannochloropsis gaditana|type=polypeptide|length=393bp
MRGAAGWDDILQHRRADSLDLSCSPPPSLMITLTRLLSLATLPTITQMLD
MTTIFAMFGNVGSVVGVVIMNKYIVAVDAFNFMIFLSFTHFVFTYLGCSV
LLHLGFFNYKPAPIRGVLPVALGSLGSVAFMNLNLAHNSVGFYQLSKLAC
IPVTIALERAFYGKTVPGPVLVTLIPITIGVGIATVNDVSVNLVGTAFAA
LAVLFTSLAQIFTSTYQKQLDCDALQLLYHSSPLIAAGSFLMIPFFDNVR
YLVQTSISLSLLNHVLSSCVLALGVNISNYLVLGKTSPLTYQVLGHLKTI
LILVLGFVVFKYKSNARAVVGILIALGGVIAYTELKRRMSLQQGGRAGMS
SSHSGLRRGFEGLSYSKVAADEEIPDGEIGGAGRLELMGAMKV
back to top
Synonyms
Publications