Naga_100205g2, gene1296 (gene) Nannochloropsis gaditana

Overview
NameNaga_100205g2
Unique Namegene1296
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:395539..397760 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100205g2
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:395539..397760 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0016787hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0009056catabolic process
GO:0016043cellular component organization
GO:0006464cellular protein modification process
GO:0006139nucleobase-containing compound metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL091ngnoL091Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO01G03990NO01G03990Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna1342rna1342-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna1342rna1342Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna1342

>rna1342-protein ID=rna1342-protein|Name=rna1342|organism=Nannochloropsis gaditana|type=polypeptide|length=585bp
MKRAREPEDNNGTVHGSRDRASTSSVAPKASSLRPKCPYLDTVNRTYLDF
DFEKLCSVSLSNMNIYVCLVCGKFFQGRGPRTHAHTHSLHDFHHVFMNLH
TARIFCLPDNYEVLDSSLDDIKRALFPSFTPAAIAQLDTNTTLVRDVHGV
SYLPGFVGLNNLKSTDYVNVVLQALGHVTPLRNYFLQPSLYEAGAKNQLV
LRFGEVMRKLWSQDNFKSTVSPHDFLQEVVSASGKRFAIGKPGEAVDFLS
WLLHQLHVGLGGTMPMVGCKGGEGGKKKKAGRRSVVLDCFQGEIRVRTLT
KARKDWTVGGRGEEEGDEDDGTGRGNGAQEEKEGEPAGEWAVSETRSPFL
FLTVDIPQTPLFKDSQGGVIIPHIPLYSVLDKFNGVKVVDAVKAGVHTRK
QYWITRLPQYLILSLARLTRNHFFVEKNPTIVNFPVKNLELRDYFLPEAG
LPTEEGLKTMTVGELKGFVQAHGGGDAKEAVEREDLEEQARAVLNEVAGT
KYDLVANVVHDSPPGQEKKEAARGEATPPGTYRVHVFNRASDQWYEIQDL
HVQETLPQLITISESCVLIYEKKGVERARGCGRGH
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Synonyms
Publications