NO01G03990, NO01G03990 (gene) Nannochloropsis oceanica

Overview
NameNO01G03990
Unique NameNO01G03990
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2786
Alignment locationchr1:1064193..1066978 +

Link to JBrowse

Properties
Property NameValue
DescriptionU4 tri-snrnp-associated protein 2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:1064193..1066978 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006397mRNA processing
GO:0000245spliceosomal complex assembly
GO:0016579protein deubiquitination
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0036459thiol-dependent ubiquitinyl hydrolase activity
GO:0008270zinc ion binding
GO:0005488binding
Vocabulary: INTERPRO
TermDefinition
IPR038765Papain_like_cys_pep_sf
IPR028889USP_dom
IPR033809USP39
IPR001394Peptidase_C19_UCH
IPR001607Znf_UBP
Homology
[Close]
BLAST of NO01G03990 vs. NCBI_GenBank
Match: EWM29334.1 (u4 tri-snrnp-associated protein 2 [Nannochloropsis gaditana])

HSP 1 Score: 783.9 bits (2023), Expect = 4.200e-223
Identity = 408/584 (69.86%), Postives = 450/584 (77.05%), Query Frame = 0 
Query:  102 SSRPKCPYLDTVNRSYLDFDFEKVCSVSLSNMNIYACLVCGKFFQGRGPRTQAHTHSVQAFHHVFMNLHNARIYCLPDNYEVLDSSLDDIKRALFPSFPPSDIARLDSNTTLVRDVHGVSFLPGFIGLNNLKNTDYVNVVLQALAHIVPLRDFFLQPSLYQDGVGGEAIXXXXXXXXXXXXXXXKAHFQLVLLFGEVMRKLWSKYNFKSTVSPHDFLQEVVGASGKRFKIGKQGEAAEFLSWLLHHLHVGL--XXXXXXXKGNKGGS-------SVILECLQGEIKVMTQTKVKKILTLGGGKAGREDEEDDGTGRNVGRGGEDDVAEIGEGEWVETVAKAPFLFLTVNIPQTPLFKDSQGGVIIPQVPLYSVLEKFNGRKVVDVVKGGVHTRKKYWITRLPRYLILSLARLTRNHFFVEKNPTIVNFPVKNLEMKDYFFPDEGGEEGGKGGLPTEEELAVMSVGELKAFVLAHGGGGAAGQVRGAVEKAELVEIARRVLLEIGGTKYDLVANVVHDSPPGQEKKEATSRGEDSGVPQGTYRVHVFNRASDQWYEIQDLHVQETLPQLITISESCLLIYEKKGL 677
            S RPKCPYLDTVNR+YLDFDFEK+CSVSLSNMNIY CLVCGKFFQGRGPRT AHTHS+  FHHVFMNLH ARI+CLPDNYEVLDSSLDDIKRALFPSF P+ IA+LD+NTTLVRDVHGVS+LPGF+GLNNLK+TDYVNVVLQAL H+ PLR++FLQPSLY+ G                      A  QLVL FGEVMRKLWS+ NFKSTVSPHDFLQEVV ASGKRF IGK GEA +FLSWLLH LHVGL         KG +GG        SV+L+C QGEI+V T TK +K  T+GG     E+E                      GEW  +  ++PFLFLTV+IPQTPLFKDSQGGVIIP +PLYSVL+KFNG KVVD VK GVHTRK+YWITRLP+YLILSLARLTRNHFFVEKNPTIVNFPVKNLE++DYF P+         GLPTEE L  M+VGELK FV AHGGG A    + AVE+ +L E AR VL E+ GTKYDLVANVVHDSPPGQEKKEA +RGE    P GTYRVHVFNRASDQWYEIQDLHVQETLPQLITISESC+LIYEKKG+
Sbjct:   32 SLRPKCPYLDTVNRTYLDFDFEKLCSVSLSNMNIYVCLVCGKFFQGRGPRTHAHTHSLHDFHHVFMNLHTARIFCLPDNYEVLDSSLDDIKRALFPSFTPAAIAQLDTNTTLVRDVHGVSYLPGFVGLNNLKSTDYVNVVLQALGHVTPLRNYFLQPSLYEAG----------------------AKNQLVLRFGEVMRKLWSQDNFKSTVSPHDFLQEVVSASGKRFAIGKPGEAVDFLSWLLHQLHVGLGGTMPMVGCKGGEGGKKKKAGRRSVVLDCFQGEIRVRTLTKARKDWTVGG---RGEEEXXXXXXXXXXXXXXXXXXXXPAGEWAVSETRSPFLFLTVDIPQTPLFKDSQGGVIIPHIPLYSVLDKFNGVKVVDAVKAGVHTRKQYWITRLPQYLILSLARLTRNHFFVEKNPTIVNFPVKNLELRDYFLPE--------AGLPTEEGLKTMTVGELKGFVQAHGGGDA----KEAVEREDLEEQARAVLNEVAGTKYDLVANVVHDSPPGQEKKEA-ARGE--ATPPGTYRVHVFNRASDQWYEIQDLHVQETLPQLITISESCVLIYEKKGV 575
[Close]
BLAST of NO01G03990 vs. NCBI_GenBank
Match: BAO65810.1 (ubiquitin specific peptidase 39 [Ciliophrys infusionum])

HSP 1 Score: 559.7 bits (1441), Expect = 1.300e-155
Identity = 299/593 (50.42%), Postives = 384/593 (64.76%), Query Frame = 0 
Query:  102 SSRPKCPYLDTVNRSYLDFDFEKVCSVSLSNMNIYACLVCGKFFQGRGPRTQAHTHSVQAFHHVFMNLHNARIYCLPDNYEVLDSSLDDIKRALFPSFPPSDIARLDSNTTLVRDVHGVSFLPGFIGLNNLKNTDYVNVVLQALAHIVPLRDFFLQPSLYQDGVGGEAIXXXXXXXXXXXXXXXKAHFQLVLLFGEVMRKLWSKYNFKSTVSPHDFLQEVVGASGKRFKIGKQGEAAEFLSWLLHHLHVGLXXXXXXXKGNKGGSSVILECLQGEIKVMTQTKVKKILTLGGGKAGREDEEDDGTGRNVGRGGEDDVAEIGEGEWVETVAKAPFLFLTVNIPQTPLFKDSQGGVIIPQVPLYSVLEKFNGRKVVDVVKGGVHTRKKYWITRLPRYLILSLARLTRNHFFVEKNPTIVNFPVKNLEMKDYF-FPDEGGEEGGKGGLPTEEELAVMSVGELKAFVLAHGGGGAAGQVRGAVEKAELVEIARRVLLEIGGTKYDLVANVVHDSPPGQEKKEATSRGEDSGVPQGTYRVHVFNRASDQWYEIQDLHVQETLPQLITISESCLLIYEKKGLVHDWQATREVASSVAAA 694
            S R KCPYLDT+NR  LDFDFEKVCSVSLSN+N+Y CLVCGKFFQGRG  T A+THSV   HHVF+NLH  +I+CLPDNYEV+D SLDDI RAL P+F P +   L+ NTTL RD+ GV++LPGFIGLNNLK TDYVNVV+ ALAH+ PLRDFFL+   Y++                       +  QLV  FGE+MRK+WSK+N+KS VSPH+ +QEV  AS +RF IGKQ E  EFLSWLL+ LH GL        G +   S+I E  QG+++V T+ +    +     +    + +D                          V+ APFL L++ IP TPLFKDSQGG IIPQVPL+ VLEK+NG+K  D++K G   RK+Y +  LP ++I  L+R T+N+F++EKNPTIV FPVKNLE+++Y  F D+          P++EEL  MS+GELKA   AH            VEKAEL E  +  +L+   TKYDL+AN+VHDSPPGQ+K       + S +  G+YRVH+ N+A+DQWYEIQDLHV ET+PQL+ +SES +LIYE++      +++ E A+  A A
Sbjct:   86 SIRHKCPYLDTINRHVLDFDFEKVCSVSLSNLNVYCCLVCGKFFQGRGKNTHAYTHSVHVSHHVFINLHTRKIFCLPDNYEVVDFSLDDIVRALNPTFTPQETRLLNYNTTLARDIFGVTYLPGFIGLNNLKKTDYVNVVVHALAHVTPLRDFFLRSQNYEN-----------------------SKSQLVHRFGELMRKIWSKHNYKSCVSPHELVQEVTVASKRRFVIGKQSECVEFLSWLLNSLHFGLG-------GTRKDKSIIHEVFQGKVRVTTRQRKTAAVKQKEEELKMLENQDAEEAGAENXXXXXXXXXXXXXXXXXXVSVAPFLMLSLEIPPTPLFKDSQGGNIIPQVPLFQVLEKYNGKKYTDILKAGYQQRKRYSLLELPPFIIFHLSRFTKNNFYMEKNPTIVTFPVKNLELREYLKFVDD-------VSFPSDEELQEMSIGELKAICKAH-----RVHPGNVVEKAELAEFVKTQVLDQIITKYDLLANIVHDSPPGQKKD-----NQMSPLEAGSYRVHLQNKATDQWYEIQDLHVDETMPQLVGLSESYMLIYERQ------KSSEEAAADSAVA 625
[Close]
BLAST of NO01G03990 vs. NCBI_GenBank
Match: XP_008911649.1 (hypothetical protein PPTG_16089 [Phytophthora parasitica INRA-310] >ETL84446.1 hypothetical protein L917_15706 [Phytophthora parasitica] >ETN03105.1 hypothetical protein PPTG_16089 [Phytophthora parasitica INRA-310])

HSP 1 Score: 538.1 bits (1385), Expect = 4.000e-149
Identity = 288/575 (50.09%), Postives = 368/575 (64.00%), Query Frame = 0 
Query:  102 SSRPKCPYLDTVNRSYLDFDFEKVCSVSLSNMNIYACLVCGKFFQGRGPRTQAHTHSVQAFHHVFMNLHNARIYCLPDNYEVLDSSLDDIKRALFPSFPPSDIARLDSNTTLVRDVHGVSFLPGFIGLNNLKNTDYVNVVLQALAHIVPLRDFFLQPSLYQDGVGGEAIXXXXXXXXXXXXXXXKAHFQLVLLFGEVMRKLWSKYNFKSTVSPHDFLQEVVGASGKRFKIGKQGEAAEFLSWLLHHLHVGLXXXXXXXKGNKGGSSVILECLQGEIKVMTQTKVKKILTLGGGKAGREDEEDDGTGRNVGRGGEDDVAEIGEGEWVETVAKAPFLFLTVNIPQTPLFKDSQGGVIIPQVPLYSVLEKFNGRKVVDVVKGGVHTRKKYWITRLPRYLILSLARLTRNHFFVEKNPTIVNFPVKNLEMKDYFFPDEGGEEGGKGGLPTEEELAVMSVGELKAFVLAHGGGGAAGQVRGAVEKAELVEIARRVLLEIGGTKYDLVANVVHDSP--PGQEKKEATSRGEDSGVPQGTYRVHVFNRASDQWYEIQDLHVQETLPQLITISESCLLIYEKK 675
            + R KCPYLDT+N   LDFDFEKVCS SLS+ N+YACLVCGK+FQGRG  T A THSVQ+ HHVF+NL   RIYCLPDNYEV+D++L  ++ AL PSF  + IA+LD N  L +D  GVS+LPGFIGLNNLK+TDY+NVV+QALAH+ PLRDFFL   +                         K   +LVL FGE++RK+WS +NFK+T+SPH+ +QE+  +S KRF +G Q E+ E L+WLL+ LH GL         +K GSS+I +C QG ++V T  + K                                A+  E E   +   +PFL +++++P TPLFKDSQGG IIPQ+PL++VLEK+NG +V  V++G    +K Y I  LP YLI  + R TRN+FF+EKNPTIVNFPVKNLE++DY   D+         LPTEEEL   S+ EL+A +  H            VEKA+LVE   RV L    TKY+LVAN+ HDSP   GQE    T     + + +G+YRVHV NRA++QWYEIQDLHVQET+PQLI +SES L+IYE+K
Sbjct:   18 AKRRKCPYLDTINHQLLDFDFEKVCSTSLSDQNVYACLVCGKYFQGRGRNTHAFTHSVQSSHHVFINLQTDRIYCLPDNYEVVDNTLKPVQDALRPSFEETQIAQLDQNRILAQDAFGVSYLPGFIGLNNLKHTDYINVVVQALAHVPPLRDFFLANKM------------------------GKVKSKLVLRFGELLRKMWSPHNFKNTISPHELVQEISVSSKKRFHVGTQNESVELLAWLLNELHRGLGG------SHKPGSSIIHKCFQGFVEVTTNDETKAA-----------------------------SADPTERESAVSTVVSPFLMMSLDLPSTPLFKDSQGGNIIPQIPLFTVLEKYNGSRVTHVLQGSHRLKKTYQIDSLPAYLIFHVKRFTRNNFFIEKNPTIVNFPVKNLELRDYLKLDQ--------NLPTEEELREKSIPELRALLRKHN-----QSTEDCVEKADLVEKILRVTLPC--TKYNLVANICHDSPVTTGQEAALQT-----NPLTEGSYRVHVQNRATEQWYEIQDLHVQETMPQLIGVSESYLMIYERK 513
[Close]
BLAST of NO01G03990 vs. NCBI_GenBank
Match: XP_008872668.1 (hypothetical protein H310_08612 [Aphanomyces invadans] >ETV98471.1 hypothetical protein H310_08612 [Aphanomyces invadans])

HSP 1 Score: 538.1 bits (1385), Expect = 4.000e-149
Identity = 298/574 (51.92%), Postives = 365/574 (63.59%), Query Frame = 0 
Query:  102 SSRPKCPYLDTVNRSYLDFDFEKVCSVSLSNMNIYACLVCGKFFQGRGPRTQAHTHSVQAFHHVFMNLHNARIYCLPDNYEVLDSSLDDIKRALFPSFPPSDIARLDSNTTLVRDVHGVSFLPGFIGLNNLKNTDYVNVVLQALAHIVPLRDFFLQPSLYQDGVGGEAIXXXXXXXXXXXXXXXKAHFQLVLLFGEVMRKLWSKYNFKSTVSPHDFLQEVVGASGKRFKIGKQGEAAEFLSWLLHHLHVGLXXXXXXXKGNK-GGSSVILECLQGEIKVMTQTKVKKILTLGGGKAGREDEEDDGTGRNVGRGGEDDVAEIGEGEWVETVAKAPFLFLTVNIPQTPLFKDSQGGVIIPQVPLYSVLEKFNGRKVVDVVKGGVHTRKKYWITRLPRYLILSLARLTRNHFFVEKNPTIVNFPVKNLEMKDYFFPDEGGEEGGKGGLPTEEELAVMSVGELKAFVLAHGGGGAAGQVRGAVEKAELVEIARRVLLEIGGTKYDLVANVVHDSPPGQEKKEATSRGEDSGVPQGTYRVHVFNRASDQWYEIQDLHVQETLPQLITISESCLLIYEKK 675
            S R KCPYLDT+    LDFDFEKVCS+SLS+ N YACLVCGK+FQGRGP T A THSVQ+FHHVF+NL   +IYCLPDNYEV D SL  IK AL PSF P  IA LD+N TL +D  GVS+LPGFIGLNNLK TDY++VVLQALAH+ PLRD+FL+P  Y   V                    K    LVL FGE++RKLWS +N K+T+SPH+ +Q +   S KRF IG+Q +A EFLSW L+ LH GL        G K  GSS++ +  QG + V T              +G  D +  G    V                       PFL+LT+++P TPLFKDSQGG +IPQVPL++VL+KF+G K+  V++G +  +K+Y I  LP YLI  + R T+N+FF EKNPTIVNFPVKNLE++DY              LPTE E+A MS  ELKA +L+H GG AA    G V+KAEL       +     TKY+L+AN+ HDSP     KE T+   D  +  GTYRVHV NR++DQWYEIQDLHVQET+PQLI ISES +LIYE+K
Sbjct:   19 SKRKKCPYLDTIRPQLLDFDFEKVCSISLSDQNAYACLVCGKYFQGRGPNTHAFTHSVQSFHHVFINLSTDKIYCLPDNYEVTDLSLAPIKNALRPSFTPEYIASLDTNRTLAQDSFGVSYLPGFIGLNNLKKTDYISVVLQALAHVTPLRDYFLRPENYAAAVA-------------------KTRSPLVLRFGELIRKLWSPHNIKNTISPHEIVQAISVVSKKRFHIGQQSDALEFLSWFLNELHRGLG-------GTKTPGSSIVHKVFQGMVHVTTLP-----------ASGAVDNDASGVSTAV-----------------------PFLYLTLDLPPTPLFKDSQGGNVIPQVPLFTVLDKFDGEKITHVLQGALRQQKQYAIDSLPPYLIFHIHRFTKNNFFTEKNPTIVNFPVKNLELRDYV----------ASRLPTEAEVAEMSTKELKA-LLSHCGGSAA----GIVDKAELAAQVNAHVATASQTKYNLIANICHDSPV-TIGKETTAINMDP-LADGTYRVHVQNRSTDQWYEIQDLHVQETMPQLIGISESYVLIYERK 515
[Close]
BLAST of NO01G03990 vs. NCBI_GenBank
Match: ETL31185.1 (hypothetical protein L916_15908 [Phytophthora parasitica] >ETM37622.1 hypothetical protein L914_15843 [Phytophthora parasitica] >ETP07397.1 hypothetical protein F441_16302 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 537.7 bits (1384), Expect = 5.300e-149
Identity = 287/575 (49.91%), Postives = 369/575 (64.17%), Query Frame = 0 
Query:  102 SSRPKCPYLDTVNRSYLDFDFEKVCSVSLSNMNIYACLVCGKFFQGRGPRTQAHTHSVQAFHHVFMNLHNARIYCLPDNYEVLDSSLDDIKRALFPSFPPSDIARLDSNTTLVRDVHGVSFLPGFIGLNNLKNTDYVNVVLQALAHIVPLRDFFLQPSLYQDGVGGEAIXXXXXXXXXXXXXXXKAHFQLVLLFGEVMRKLWSKYNFKSTVSPHDFLQEVVGASGKRFKIGKQGEAAEFLSWLLHHLHVGLXXXXXXXKGNKGGSSVILECLQGEIKVMTQTKVKKILTLGGGKAGREDEEDDGTGRNVGRGGEDDVAEIGEGEWVETVAKAPFLFLTVNIPQTPLFKDSQGGVIIPQVPLYSVLEKFNGRKVVDVVKGGVHTRKKYWITRLPRYLILSLARLTRNHFFVEKNPTIVNFPVKNLEMKDYFFPDEGGEEGGKGGLPTEEELAVMSVGELKAFVLAHGGGGAAGQVRGAVEKAELVEIARRVLLEIGGTKYDLVANVVHDSP--PGQEKKEATSRGEDSGVPQGTYRVHVFNRASDQWYEIQDLHVQETLPQLITISESCLLIYEKK 675
            + R KCPYLDT+N   LDFDFEKVCS+SLS+ N+YACLVCGK+FQGRG  T A THSVQ+ HHVF+NL   RIYCLPDNYEV+D++L  ++ AL PSF  + IA+LD N  L +D  GVS+LPGFIGLNNLK+TDY+NVV+QALAH+ PLRDFFL   +                         K   +LVL FGE++RK+WS +NFK+T+SPH+ +QE+  +S KRF +G Q E+ E L+WLL+ LH GL         +K GSS+I +C QG ++V T  + K                                A+  E E   +   +PFL +++++P TPLFKDSQGG IIPQ+PL++VLEK+NG +V  V++G    +K Y I  LP +LI  + R TRN+FF+EKNPTIVNFPVKNLE++DY   D+         LPTEEEL   S+ EL+A +  H            VEKA+LVE   RV L    TKY+LVAN+ HDSP   GQE    T     + + +G+YRVHV NRA++QWYEIQDLHVQET+PQLI +SES L+IYE+K
Sbjct:   18 AKRRKCPYLDTINHQLLDFDFEKVCSISLSDQNVYACLVCGKYFQGRGRNTHAFTHSVQSSHHVFINLQTDRIYCLPDNYEVVDNTLKPVQDALRPSFEETQIAQLDQNRILAQDAFGVSYLPGFIGLNNLKHTDYINVVVQALAHVPPLRDFFLANKM------------------------GKVKSKLVLRFGELLRKMWSPHNFKNTISPHELVQEISVSSKKRFHVGTQNESVELLAWLLNELHRGLGG------SHKPGSSIIHKCFQGFVEVTTNDETKAA-----------------------------SADPTERESAVSTVVSPFLMMSLDLPSTPLFKDSQGGNIIPQIPLFTVLEKYNGSRVTHVLQGSHRLKKTYQIDSLPAFLIFHVKRFTRNNFFIEKNPTIVNFPVKNLELRDYLKLDQ--------NLPTEEELREKSIPELRALLRKHN-----QSTEDCVEKADLVEKILRVTLPC--TKYNLVANICHDSPVTTGQEAALQT-----NPLTEGSYRVHVQNRATEQWYEIQDLHVQETMPQLIGVSESYLMIYERK 513
[Close]
BLAST of NO01G03990 vs. NCBI_GenBank
Match: ETP35458.1 (hypothetical protein F442_16315 [Phytophthora parasitica P10297])

HSP 1 Score: 537.7 bits (1384), Expect = 5.300e-149
Identity = 291/575 (50.61%), Postives = 371/575 (64.52%), Query Frame = 0 
Query:  102 SSRPKCPYLDTVNRSYLDFDFEKVCSVSLSNMNIYACLVCGKFFQGRGPRTQAHTHSVQAFHHVFMNLHNARIYCLPDNYEVLDSSLDDIKRALFPSFPPSDIARLDSNTTLVRDVHGVSFLPGFIGLNNLKNTDYVNVVLQALAHIVPLRDFFLQPSLYQDGVGGEAIXXXXXXXXXXXXXXXKAHFQLVLLFGEVMRKLWSKYNFKSTVSPHDFLQEVVGASGKRFKIGKQGEAAEFLSWLLHHLHVGLXXXXXXXKGNKGGSSVILECLQGEIKVMTQTKVKKILTLGGGKAGREDEEDDGTGRNVGRGGEDDVAEIGEGEWVETVAKAPFLFLTVNIPQTPLFKDSQGGVIIPQVPLYSVLEKFNGRKVVDVVKGGVHTRKKYWITRLPRYLILSLARLTRNHFFVEKNPTIVNFPVKNLEMKDYFFPDEGGEEGGKGGLPTEEELAVMSVGELKAFVLAHGGGGAAGQVRGAVEKAELVEIARRVLLEIGGTKYDLVANVVHDSP--PGQEKKEATSRGEDSGVPQGTYRVHVFNRASDQWYEIQDLHVQETLPQLITISESCLLIYEKK 675
            + R KCPYLDT+N   LDFDFEKVCS+SLS+ N+YACLVCGK+FQGRG  T A THSVQ+ HHVF+NL   RIYCLPDNYEV+D++L  ++ AL PSF  + IA+LD N  L +D  GVS+LPGFIGLNNLK+TDY+NVV+QALAH+ PLRDFFL   +                         K   +LVL FGE++RK+WS +NFK+T+SPH+ +QE+  +S KRF +G Q E+ E L+WLL+ LH GL         +K GSS+I +C QG ++V T  + K   T             D T R                  V TV  +PFL +++++P TPLFKDSQGG IIPQ+PL++VLEK+NG +V  V++G    +K Y I  LP +LI  + R TRN+FF+EKNPTIVNFPVKNLE++DY   D+         LPTEEEL   S+ EL+A +  H            VEKA+LVE   RV L    TKY+LVAN+ HDSP   GQE    T     + + +G+YRVHV NRA++QWYEIQDLHVQET+PQLI +SES L+IYE+K
Sbjct:   18 AKRRKCPYLDTINHQLLDFDFEKVCSISLSDQNVYACLVCGKYFQGRGRNTHAFTHSVQSSHHVFINLQTDRIYCLPDNYEVVDNTLKPVQDALRPSFEETQIAQLDQNRILAQDAFGVSYLPGFIGLNNLKHTDYINVVVQALAHVPPLRDFFLANKM------------------------GKVKSKLVLRFGELLRKMWSPHNFKNTISPHELVQEISVSSKKRFHVGTQNESVELLAWLLNELHRGLGG------SHKPGSSIIHKCFQGFVEVTTNDETKAAST-------------DPTERESA---------------VSTVV-SPFLMMSLDLPSTPLFKDSQGGNIIPQIPLFTVLEKYNGSRVTHVLQGSHRLKKTYQIDSLPAFLIFHVKRFTRNNFFIEKNPTIVNFPVKNLELRDYLKLDQ--------NLPTEEELREKSIPELRALLRKHN-----QSTEDCVEKADLVEKILRVTLPC--TKYNLVANICHDSPVTTGQEAALQT-----NPLTEGSYRVHVQNRATEQWYEIQDLHVQETMPQLIGVSESYLMIYERK 513
[Close]
BLAST of NO01G03990 vs. NCBI_GenBank
Match: ETO66304.1 (hypothetical protein F444_16445 [Phytophthora parasitica P1976])

HSP 1 Score: 537.3 bits (1383), Expect = 6.900e-149
Identity = 291/575 (50.61%), Postives = 371/575 (64.52%), Query Frame = 0 
Query:  102 SSRPKCPYLDTVNRSYLDFDFEKVCSVSLSNMNIYACLVCGKFFQGRGPRTQAHTHSVQAFHHVFMNLHNARIYCLPDNYEVLDSSLDDIKRALFPSFPPSDIARLDSNTTLVRDVHGVSFLPGFIGLNNLKNTDYVNVVLQALAHIVPLRDFFLQPSLYQDGVGGEAIXXXXXXXXXXXXXXXKAHFQLVLLFGEVMRKLWSKYNFKSTVSPHDFLQEVVGASGKRFKIGKQGEAAEFLSWLLHHLHVGLXXXXXXXKGNKGGSSVILECLQGEIKVMTQTKVKKILTLGGGKAGREDEEDDGTGRNVGRGGEDDVAEIGEGEWVETVAKAPFLFLTVNIPQTPLFKDSQGGVIIPQVPLYSVLEKFNGRKVVDVVKGGVHTRKKYWITRLPRYLILSLARLTRNHFFVEKNPTIVNFPVKNLEMKDYFFPDEGGEEGGKGGLPTEEELAVMSVGELKAFVLAHGGGGAAGQVRGAVEKAELVEIARRVLLEIGGTKYDLVANVVHDSP--PGQEKKEATSRGEDSGVPQGTYRVHVFNRASDQWYEIQDLHVQETLPQLITISESCLLIYEKK 675
            + R KCPYLDT+N   LDFDFEKVCS+SLS+ N+YACLVCGK+FQGRG  T A THSVQ+ HHVF+NL   RIYCLPDNYEV+D++L  ++ AL PSF  + IA+LD N  L +D  GVS+LPGFIGLNNLK+TDY+NVV+QALAH+ PLRDFFL   +                         K   +LVL FGE++RK+WS +NFK+T+SPH+ +QE+  +S KRF +G Q E+ E L+WLL+ LH GL         +K GSS+I +C QG ++V T  + K         A R + E                        V TV  +PFL +++++P TPLFKDSQGG IIPQ+PL++VLEK+NG +V  V++G    +K Y I  LP YLI  + R TRN+FF+EKNPTIVNFPVKNLE++DY   D+         LPTEEEL   S+ EL+A +  H            VEKA+LVE   RV L    TKY+LVAN+ HDSP   GQE    T     + + +G+YRVHV NRA++QWYEIQDLHVQET+PQLI +SES L+IYE+K
Sbjct:   18 AKRRKCPYLDTINHQLLDFDFEKVCSISLSDQNVYACLVCGKYFQGRGRNTHAFTHSVQSSHHVFINLQTDRIYCLPDNYEVVDNTLKPVQDALRPSFEETQIAQLDQNRILAQDAFGVSYLPGFIGLNNLKHTDYINVVVQALAHVPPLRDFFLANKM------------------------GKVKSKLVLRFGELLRKMWSPHNFKNTISPHELVQEISVSSKKRFHVGTQNESVELLAWLLNGLHRGLGG------SHKPGSSIIHKCFQGFVEVTTNDETK------AASADRTERESA----------------------VSTVV-SPFLMMSLDLPSTPLFKDSQGGNIIPQIPLFTVLEKYNGSRVTHVLQGSHRLKKTYQIDSLPAYLIFHVKRFTRNNFFIEKNPTIVNFPVKNLELRDYLKLDQ--------NLPTEEELREKSIPELRALLRKHN-----QSTEDCVEKADLVEKILRVTLPC--TKYNLVANICHDSPVTTGQEAALQT-----NPLTEGSYRVHVQNRATEQWYEIQDLHVQETMPQLIGVSESYLMIYERK 513
[Close]
BLAST of NO01G03990 vs. NCBI_GenBank
Match: ETK77755.1 (hypothetical protein L915_16013 [Phytophthora parasitica])

HSP 1 Score: 536.6 bits (1381), Expect = 1.200e-148
Identity = 287/575 (49.91%), Postives = 368/575 (64.00%), Query Frame = 0 
Query:  102 SSRPKCPYLDTVNRSYLDFDFEKVCSVSLSNMNIYACLVCGKFFQGRGPRTQAHTHSVQAFHHVFMNLHNARIYCLPDNYEVLDSSLDDIKRALFPSFPPSDIARLDSNTTLVRDVHGVSFLPGFIGLNNLKNTDYVNVVLQALAHIVPLRDFFLQPSLYQDGVGGEAIXXXXXXXXXXXXXXXKAHFQLVLLFGEVMRKLWSKYNFKSTVSPHDFLQEVVGASGKRFKIGKQGEAAEFLSWLLHHLHVGLXXXXXXXKGNKGGSSVILECLQGEIKVMTQTKVKKILTLGGGKAGREDEEDDGTGRNVGRGGEDDVAEIGEGEWVETVAKAPFLFLTVNIPQTPLFKDSQGGVIIPQVPLYSVLEKFNGRKVVDVVKGGVHTRKKYWITRLPRYLILSLARLTRNHFFVEKNPTIVNFPVKNLEMKDYFFPDEGGEEGGKGGLPTEEELAVMSVGELKAFVLAHGGGGAAGQVRGAVEKAELVEIARRVLLEIGGTKYDLVANVVHDSP--PGQEKKEATSRGEDSGVPQGTYRVHVFNRASDQWYEIQDLHVQETLPQLITISESCLLIYEKK 675
            + R KCPYLDT+N   LDFDFEKVCS SLS+ N+YACLVCGK+FQGRG  T A THSVQ+ HHVF+NL   RIYCLPDNYEV+D++L  ++ AL PSF  + IA+LD N  L +D  GVS+LPGFIGLNNLK+TDY+NVV+QALAH+ PLRDFFL   +                         K   +LVL FGE++RK+WS +NFK+T+SPH+ +QE+  +S KRF +G Q E+ E L+WLL+ LH GL         +K GSS+I +C QG ++V T  + K                                A+  E E   +   +PFL +++++P TPLFKDSQGG IIPQ+PL++VLEK+NG +V  V++G    +K Y I  LP +LI  + R TRN+FF+EKNPTIVNFPVKNLE++DY   D+         LPTEEEL   S+ EL+A +  H            VEKA+LVE   RV L    TKY+LVAN+ HDSP   GQE    T     + + +G+YRVHV NRA++QWYEIQDLHVQET+PQLI +SES L+IYE+K
Sbjct:   18 AKRRKCPYLDTINHQLLDFDFEKVCSTSLSDQNVYACLVCGKYFQGRGRNTHAFTHSVQSSHHVFINLQTDRIYCLPDNYEVVDNTLKPVQDALRPSFEETQIAQLDQNRILAQDAFGVSYLPGFIGLNNLKHTDYINVVVQALAHVPPLRDFFLANKM------------------------GKVKSKLVLRFGELLRKMWSPHNFKNTISPHELVQEISVSSKKRFHVGTQNESVELLAWLLNELHRGLGG------SHKPGSSIIHKCFQGFVEVTTNDETKAA-----------------------------SADPTERESAVSTVVSPFLMMSLDLPSTPLFKDSQGGNIIPQIPLFTVLEKYNGSRVTHVLQGSHRLKKTYQIDSLPAFLIFHVKRFTRNNFFIEKNPTIVNFPVKNLELRDYLKLDQ--------NLPTEEELREKSIPELRALLRKHN-----QSTEDCVEKADLVEKILRVTLPC--TKYNLVANICHDSPVTTGQEAALQT-----NPLTEGSYRVHVQNRATEQWYEIQDLHVQETMPQLIGVSESYLMIYERK 513
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BLAST of NO01G03990 vs. NCBI_GenBank
Match: ETI37520.1 (hypothetical protein F443_16481 [Phytophthora parasitica P1569])

HSP 1 Score: 534.6 bits (1376), Expect = 4.500e-148
Identity = 286/575 (49.74%), Postives = 368/575 (64.00%), Query Frame = 0 
Query:  102 SSRPKCPYLDTVNRSYLDFDFEKVCSVSLSNMNIYACLVCGKFFQGRGPRTQAHTHSVQAFHHVFMNLHNARIYCLPDNYEVLDSSLDDIKRALFPSFPPSDIARLDSNTTLVRDVHGVSFLPGFIGLNNLKNTDYVNVVLQALAHIVPLRDFFLQPSLYQDGVGGEAIXXXXXXXXXXXXXXXKAHFQLVLLFGEVMRKLWSKYNFKSTVSPHDFLQEVVGASGKRFKIGKQGEAAEFLSWLLHHLHVGLXXXXXXXKGNKGGSSVILECLQGEIKVMTQTKVKKILTLGGGKAGREDEEDDGTGRNVGRGGEDDVAEIGEGEWVETVAKAPFLFLTVNIPQTPLFKDSQGGVIIPQVPLYSVLEKFNGRKVVDVVKGGVHTRKKYWITRLPRYLILSLARLTRNHFFVEKNPTIVNFPVKNLEMKDYFFPDEGGEEGGKGGLPTEEELAVMSVGELKAFVLAHGGGGAAGQVRGAVEKAELVEIARRVLLEIGGTKYDLVANVVHDSP--PGQEKKEATSRGEDSGVPQGTYRVHVFNRASDQWYEIQDLHVQETLPQLITISESCLLIYEKK 675
            + R KCPYLDT+N   LDFDFEKVCS+SLS+ N+YACLVCGK+FQGRG  T A THSVQ+ HHVF+NL   RIYCLPDNYEV+D++L  ++ AL PSF  + IA+LD N  L +D  GVS+LPGFIGLNNLK+TDY+NVV+QALAH+ PLRDFFL   +                         K   +LVL FGE++RK+WS +NFK+T+SPH+ +QE+  +S KRF +G Q E+ E L+WLL+ LH GL         +K GSS+I +C QG ++V T  + K                                A+  E E   +   +PFL +++++P TPLFKDSQGG IIPQ+PL++VLEK+NG +V  V++G    +K Y I  LP +LI  + R TRN+F +EKNPTIVNFPVKNLE++DY   D+         LPTEEEL   S+ EL+A +  H            VEKA+LVE   RV L    TKY+LVAN+ HDSP   GQE    T     + + +G+YRVHV NRA++QWYEIQDLHVQET+PQLI +SES L+IYE+K
Sbjct:   18 AKRRKCPYLDTINHQLLDFDFEKVCSISLSDQNVYACLVCGKYFQGRGRNTHAFTHSVQSSHHVFINLQTDRIYCLPDNYEVVDNTLKPVQDALRPSFEETQIAQLDQNRILAQDAFGVSYLPGFIGLNNLKHTDYINVVVQALAHVPPLRDFFLANKM------------------------GKVKSKLVLRFGELLRKMWSPHNFKNTISPHELVQEISVSSKKRFHVGTQNESVELLAWLLNELHRGLGG------SHKPGSSIIHKCFQGFVEVTTNDETKAA-----------------------------SADPTERESAVSTVVSPFLMMSLDLPSTPLFKDSQGGNIIPQIPLFTVLEKYNGSRVTHVLQGSHRLKKTYQIDSLPAFLIFHVKRFTRNNFCIEKNPTIVNFPVKNLELRDYLKLDQ--------NLPTEEELREKSIPELRALLRKHN-----QSTEDCVEKADLVEKILRVTLPC--TKYNLVANICHDSPVTTGQEAALQT-----NPLTEGSYRVHVQNRATEQWYEIQDLHVQETMPQLIGVSESYLMIYERK 513
[Close]
BLAST of NO01G03990 vs. NCBI_GenBank
Match: XP_009832562.1 (hypothetical protein H257_08404 [Aphanomyces astaci] >ETV78225.1 hypothetical protein H257_08404 [Aphanomyces astaci])

HSP 1 Score: 533.5 bits (1373), Expect = 9.900e-148
Identity = 293/574 (51.05%), Postives = 361/574 (62.89%), Query Frame = 0 
Query:  101 ISSRPKCPYLDTVNRSYLDFDFEKVCSVSLSNMNIYACLVCGKFFQGRGPRTQAHTHSVQAFHHVFMNLHNARIYCLPDNYEVLDSSLDDIKRALFPSFPPSDIARLDSNTTLVRDVHGVSFLPGFIGLNNLKNTDYVNVVLQALAHIVPLRDFFLQPSLYQDGVGGEAIXXXXXXXXXXXXXXXKAHFQLVLLFGEVMRKLWSKYNFKSTVSPHDFLQEVVGASGKRFKIGKQGEAAEFLSWLLHHLHVGLXXXXXXXKGNKGGSSVILECLQGEIKVMTQTKVKKILTLGGGKAGREDEEDDGTGRNVGRGGEDDVAEIGEGEWVETVAKAPFLFLTVNIPQTPLFKDSQGGVIIPQVPLYSVLEKFNGRKVVDVVKGGVHTRKKYWITRLPRYLILSLARLTRNHFFVEKNPTIVNFPVKNLEMKDYFFPDEGGEEGGKGGLPTEEELAVMSVGELKAFVLAHGGGGAAGQVRGAVEKAELVEIARRVLLEIGGTKYDLVANVVHDSPPGQEKKEATSRGEDSGVPQGTYRVHVFNRASDQWYEIQDLHVQETLPQLITISESCLLIYEKK 675
            +S R KCPYLDT+    LDFDFEKVCS+SLS+ N YACLVCGK+FQGRGP T A THSVQ+FHHVF+NL   +IYCLPDNYEV D SL  IK AL PSF P   A LD+N TL +D  GVS+LPGFIGLNNLK TDY++VVLQALAH+ PLRD+FLQP  Y   V                    K    LVL FGE++RKLWS +N K+T+SPH+ +Q +   S KRF IG+Q +A EFLSW L+ LH GL            GSSVI +  QG + V T       L   G                         A   +G+        PFL+LT+++P TPLFKDSQGG +IPQVPL++VLEKF+G K+  V+ G     K+Y I  LP YLI  + R T+N+FF EKNPTIVNFPVKNLE+K+Y              +PT  E+  M+  ELKA +L+H GG +A    G V+KA+LV    + + +   TKY+L+AN+ HDSP     KE T+   D  +  GTYRVHV NR++DQWYE+QDLHVQET+PQLI ISES +LIYE+K
Sbjct:   16 LSKRKKCPYLDTIRPQLLDFDFEKVCSISLSDQNAYACLVCGKYFQGRGPNTHAFTHSVQSFHHVFINLSTDKIYCLPDNYEVTDLSLAPIKNALRPSFTPEYTASLDTNRTLAQDSFGVSYLPGFIGLNNLKKTDYISVVLQALAHVTPLRDYFLQPDNYAAAVA-------------------KTRSPLVLRFGELIRKLWSPHNIKNTISPHEIVQAISVVSKKRFHIGRQSDALEFLSWFLNELHRGLGGT------RTPGSSVIHKVFQGMVHVTT-------LPAPG-------------------------AATHDGDAAAVPTAVPFLYLTLDLPPTPLFKDSQGGNVIPQVPLFTVLEKFDGDKITHVLHGATRQHKQYSIDSLPPYLIFHIHRFTKNNFFTEKNPTIVNFPVKNLELKEYV----------ASRVPTAAEVDAMTTTELKA-LLSHCGGTSA----GIVDKADLVAHVHKHVAKASQTKYNLIANICHDSPV-TIGKETTAVNMDP-LADGTYRVHVQNRSTDQWYEVQDLHVQETMPQLIGISESYVLIYERK 515
The following BLAST results are available for this feature:
BLAST of NO01G03990 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29334.14.200e-22369.86u4 tri-snrnp-associated protein 2 [Nannochloropsis... [more]
BAO65810.11.300e-15550.42ubiquitin specific peptidase 39 [Ciliophrys infusi... [more]
XP_008911649.14.000e-14950.09hypothetical protein PPTG_16089 [Phytophthora para... [more]
XP_008872668.14.000e-14951.92hypothetical protein H310_08612 [Aphanomyces invad... [more]
ETL31185.15.300e-14949.91hypothetical protein L916_15908 [Phytophthora para... [more]
ETP35458.15.300e-14950.61hypothetical protein F442_16315 [Phytophthora para... [more]
ETO66304.16.900e-14950.61hypothetical protein F444_16445 [Phytophthora para... [more]
ETK77755.11.200e-14849.91hypothetical protein L915_16013 [Phytophthora para... [more]
ETI37520.14.500e-14849.74hypothetical protein F443_16481 [Phytophthora para... [more]
XP_009832562.19.900e-14851.05hypothetical protein H257_08404 [Aphanomyces astac... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL005nonsL005Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR047ncniR047Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR091ngnoR091Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK007894NSK007894Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO01G03990.1NO01G03990.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|241832gene_411Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100205g2gene1296Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO01G03990.1NO01G03990.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO01G03990 ID=NO01G03990|Name=NO01G03990|organism=Nannochloropsis oceanica|type=gene|length=2786bp
CATGCGTGCAGGTCCATGTGATGCTATTGCATCTCCCTCCCTCCACAAAT
ACGCCGCATCGAGCCTTCCTGCCGCATGCGCACTGAGCATATAGCTCTCA
CAAAAGGGTGCACGTGGATGGTGGCCGATAATTCGAGAAGAGGGGAGGCC
AGGGCATTAGCAGTGGCTGGAGCTCACGCGGCCCGCTGGGCATCATCGCT
AACGACTGCTCTCTTCACTTCCGGTCCTCCCGCTTTTACCCACATCTTGC
ACACACCACAGAACACGCCACGCCGCGTAGCCATGAAGCGCACGAGGGAT
GAGGACGAGGATCAAGGGGGCGCGAACGAGGGAAGCGCTGTTCAAGgtac
gtgcaaagttgtagtatggttaggtgaagagggagggtggagaaggtgca
gggcagcgtgacgggtaagatggaggaagaagcaaataatgcggccaagc
atgtatctagactgctaggtgacggtgggggttgctttgtgcggagaaga
tagacgctgctgttatggtaaagatggtaagctgcccacagaagaagcac
cagacaggcaccgcagaaaagcaacgcgacgcttaacgatacgcccttgt
catctcgtgctttcgtctgcgctgagcgtacgatgcttcacaataacact
tccacttctccacactcaagtaccaaaaccaaccacctctcccttccccc
tatacccaaccaacagCCACCGCCAGCACAAGCAGCGCGAGCGCCATCAG
CTCGCGGCCCAAGTGTCCCTACCTCGACACCGTCAATCGCTCCTACCTCG
ATTTCGACTTCGAAAAAGTGTGCTCTGTCTCCCTATCAAACATGAATATT
TATGCCTGCCTTGTCTGCGGAAAGTTTTTTCAAGGCCGTGGCCCTCGCAC
ACAAGCGCATACCCACTCCGTCCAAGCCTTCCACCACGTATTTATGAATC
TGCACAACGCCCGCATTTACTGCTTACCCGACAATTATGAGGTGTTGGAC
TCGTCGTTGGATGATATCAAACGGGCCTTGTTTCCTTCCTTTCCTCCCTC
GGACATCGCCCGCTTGGACAGCAATACCACCCTGGTAAGGGACGTTCATG
GCGTGTCCTTCCTACCCGGATTTATTGGATTGAACAATTTGAAAAACACG
GATTACGTCAACGTAGTCCTTCAAGCCCTTGCCCATATCGTCCCTCTTCG
GGATTTTTTCCTTCAACCCTCTCTGTACCAAGACGGCGTCGGCGGCGAAG
CAATAGCAGCAACAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGACG
AAAGCCCACTTCCAACTCGTGTTGCTATTTGGGGAGGTCATGAGGAAGTT
GTGGAGTAAGTATAATTTCAAGAGTACGGTGTCCCCACACGATTTCCTCC
AGGAGGTGGTGGGCGCGAGTGGCAAGAGATTCAAGATCGGGAAGCAGGGG
GAGGCGGCTGAGTTCTTGTCGTGGTTGCTCCACCACTTACACGTCGGGTT
GGTGGGGAGAGAGGGAAAGAAGAAGGGGAACAAGGGAGGTAGTAGCGTGA
TTTTGGAGTGCCTCCAGGGCGAAATAAAAGTGATGACGCAGACGAAAGTG
AAAAAGATATTGACCTTGGGAGGGGGGAAGGCAGGGAGAGAGGACGAGGA
GGATGATGGAACGGGGCGGAATGTCGGCCGAGGAGGGGAGGATGATGTAG
CCGAGATAGGGGAAGGAGAGTGGGTGGAGACTGTGGCAAAGGCGCCGTTT
TTATTTTTGACGGTTAACATACCTCAGACCCCTTTGTTCAAGGACTCGCA
GGGGGGGGTGATCATCCCGCAGGTCCCTCTTTACAGTGTGTTAGAAAAGT
TCAACGGGAGAAAAGTAGTGGATGTTGTGAAAGGAGGGGTTCACACGCGG
AAGAAATATTGGATCACACGCCTCCCACGATACCTGATCCTGAGCTTGGC
CCGATTGACACGGAACCATTTTTTCGTGGAAAAAAACCCGACGATTGTGA
ATTTTCCCGTTAAGAATTTGGAGATGAAGGATTATTTTTTCCCGGACGAG
GGCGGGGAGGAGGGAGGGAAGGGAGGATTGCCTACGGAGGAGGAATTGGC
CGTGATGAGCGTAGGGGAATTGAAGGCTTTTGTGCTGGCGCATGGGGGGG
GAGGGGCCGCAGGGCAGGTGAGGGGTGCGGTAGAGAAAGCGGAATTGGTA
GAAATTGCGCGAAGGGTTTTACTAGAGATCGGAGGGACGAAATATGACCT
TGTTGCGAATGTGGTGCATGATTCCCCGCCGGGACAGGAGAAAAAGGAGG
CGACTTCTCGAGGGGAGGATTCTGGAGTGCCACAGGGGACATATAGGGTG
CATGTCTTTAACCGGGCTTCGGATCAGTGGTATGAGATCCAAGATTTGCA
CGTTCAGGAGACGCTGCCTCAATTGATTACGATTAGTGAGAGTTGTTTAT
TGATTTATGAGAAGAAGGGGTTGGTGCATGACTGGCAGGCGACCAGAGAG
GTGGCGAGTTCGGTGGCAGCGGCCACGGCGGGAAAGGGCGGACAGTGAGG
AGGAGGGATCTGGAAATGAAGGTGATGGAACTGCTGGTATATGAGTTGAG
AGGGAGAGGCGTGTTCAAATTGGTAAATAAGGCGCGTGTGCGCAGGCAGC
GACCATACAGAGAGGGATGACAGGGGTGGAAGGAAAGGTTTGAGGGTTGG
TAGGTGTAATAATAGGGGAACAGAGAGGGATGAAAGAGAGGGAGAAGACG
ACAAGAATCAAATGCAAAGAAATACAAACAAAGCGT
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protein sequence of NO01G03990.1

>NO01G03990.1-protein ID=NO01G03990.1-protein|Name=NO01G03990.1|organism=Nannochloropsis oceanica|type=polypeptide|length=701bp
MRTEHIALTKGCTWMVADNSRRGEARALAVAGAHAARWASSLTTALFTSG
PPAFTHILHTPQNTPRRVAMKRTRDEDEDQGGANEGSAVQATASTSSASA
ISSRPKCPYLDTVNRSYLDFDFEKVCSVSLSNMNIYACLVCGKFFQGRGP
RTQAHTHSVQAFHHVFMNLHNARIYCLPDNYEVLDSSLDDIKRALFPSFP
PSDIARLDSNTTLVRDVHGVSFLPGFIGLNNLKNTDYVNVVLQALAHIVP
LRDFFLQPSLYQDGVGGEAIAATGGGGGGGGGGGTKAHFQLVLLFGEVMR
KLWSKYNFKSTVSPHDFLQEVVGASGKRFKIGKQGEAAEFLSWLLHHLHV
GLVGREGKKKGNKGGSSVILECLQGEIKVMTQTKVKKILTLGGGKAGRED
EEDDGTGRNVGRGGEDDVAEIGEGEWVETVAKAPFLFLTVNIPQTPLFKD
SQGGVIIPQVPLYSVLEKFNGRKVVDVVKGGVHTRKKYWITRLPRYLILS
LARLTRNHFFVEKNPTIVNFPVKNLEMKDYFFPDEGGEEGGKGGLPTEEE
LAVMSVGELKAFVLAHGGGGAAGQVRGAVEKAELVEIARRVLLEIGGTKY
DLVANVVHDSPPGQEKKEATSRGEDSGVPQGTYRVHVFNRASDQWYEIQD
LHVQETLPQLITISESCLLIYEKKGLVHDWQATREVASSVAAATAGKGGQ
*
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Synonyms
Publications