Naga_100042g20, gene1225 (gene) Nannochloropsis gaditana

Overview
NameNaga_100042g20
Unique Namegene1225
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:204097..206232 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100042g20
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:204097..206232 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0009056catabolic process
GO:0005975carbohydrate metabolic process
GO:0009987cellular process
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0003824catalytic activity
GO:0000166nucleotide binding
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0005737cytoplasm
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL091ngnoL091Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO01G04750NO01G04750Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna1271rna1271-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna1271rna1271Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna1271

>rna1271-protein ID=rna1271-protein|Name=rna1271|organism=Nannochloropsis gaditana|type=polypeptide|length=402bp
MATLHISNLTLTIYNHGIFVLMSAALSFLLIVWRFSLAEAGRSHHFEGPS
SNPVKPHSITIVGSGNFGSAIARLLGRNVLRSPKHFRSEVRMWVFEEELD
DGRKLSDVINADHENVKYLPGIQLPTNVRAVPDLSDAVRNASIVVFVLPH
QFLPGLLPRISSCLHRGAMAVSLVKGLDFDDEGPVLITDMIREGLGEDVS
EVCVLMGANVADEMARDEFCEATLGCPDPEGAGAVLQQLFDCPTFRVEVT
PDPIGVELCGALKNVVALAAGFCDGLDWGGNTKAAIIRRGLEEMRLFCKL
LHPSVRDMTFFESCGVADLITTCYGGRNRKCAETFARAGGTMAWDEIEKE
ELGGQHLQGPQTTSKLHKVLEQKKWLSRFPLFRSVYQIAYQGRPPATLVQ
DL
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Synonyms
Publications