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Properties
| Property Name | Value |
|---|
| Product | glycerol-3-phosphate dehydrogenase 1-like protein |
| Orig transcript id | gnl|cribi|Naga_100042g20.5670.mrna |
| Orig protein id | gnl|cribi|Naga_100042g20.5670 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002457.1 | supercontig | CM002457.1:204097..206232 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1271 ID=rna1271|Name=rna1271|organism=Nannochloropsis gaditana|type=mRNA|length=3796bp
GCTGAAGATAGATGCGCTTGCCTGCAGAAACTTGAAATGCCGCTTCTTCA
GTCACCCCCAGGCCTTATATTCTCGTCGTACGGCTTAACTTCCCTCACGT
GGGGAAGCATCGTAACGTACCCTTGATGAAAGAAAACCCCGTCAATGGAA
GGGTAATTGTATCTTTCCCTGCCCCTCTTAACTTCTTCATCCGCCCAATC
AATCCAAGCAGGTCGCTCGACACGAAGACTGGCCATTGTTTTGCACCGTC
AAACCATGATGCTGATAACGGCGGCCCCGTGGCCCGAGTGGTACTATATT
GTAATGTTAATTGTGAACTGTGTGGGCATCATTTTTTCTGTCGGGGTCAT
TTATCGAATTCATCGGAGGCGAGTGGCTGGTGGCAGGGCAGCTGAACCAG
GGATGATTCGATTTATTGACGAGCTCGTGGTGTGGCTTGCCAGTTATTAT
GCAGTAGAGTCACTTGTACAGGGCCCTCTCGTTATATCGGCCTTTTTCCT
TGACCCTAGACGCGGGTACGGTCAGCTCCAGTATTACTGGTGGACAATAT
CGGTCCCTCTCATGTGGTTTCCTCAATTTTTCCACACTTATATCGCCGCG
GTTTGCTACAACTGGCTTGTTCGCGGTTACGGTATAGACCGGCTTGTCCG
CAGCCTGCGGCCGGCCCTCCAAGTCATCTTTCTCGTCATTCTCGCGCAAT
TTGTCTTCGAAGTGCTGGTCCTCTTCATCGACCGATGGACCCCCCTCTTT
ACCCCCAAAGATTGGGCCGTCTTTGCGTCGTTCGAGCACTTGGTTATTTT
TGCCGTCAACACAAGCCTCATGTGCTTCTTCTACCTGGCCACGTGCTGGA
CCATTCTGGCCCGCTTCCGAGCGAGGGAGCGTATCAAGAAGCGGCACCGG
AAAATCGTGCGGCGCTTTTTGATCATCAACGCCTTTGCGATCGTGTGCTT
TACTTGCTGGGCAGCCTTTCTATTCAGCCTCTACCAGGACAAAGCCTTCC
CTGTTCCGGTGGGTATATCCCTTCTGCTTGTTGCCGCAATGCAACCCATC
ATCGACGCTGTGATTTTGGGCAACCTTTTCCAGGGCGCGAGGTGCTATAT
GGTGCGTAAGATACCAAGGTGGCTCTGCATATCTACCTGCAACCAAGGAC
AAAGCTCTCCTGAAGGAGGAGCAATGACAGGGGGTCCTGGTTCACTACCT
CGGTTACCCATAGCAAGTGCTAACAAATTGAGCTCAGTCCGATACCTGGA
GTCTGTCATGGCACGCAAAGGGAATGTGGTTATCGAAGGCGGGAATGAAA
ACGAGATACTCGCCTATTCGCCCGTCACGGTGTTTGTAACAACTTTCAAC
ATGGGCCCGGTGAGAAATCTGGCCGCCCTCGGCGGCCGTCTGGAGGAGTG
GATACCGGCCCGTGGGTATGACGTGTACGTTATTGGCCTCCAGGAATGTC
ACTGCGTGGAAGAATTTCGGGCCGCCCTCCACCAGCATCTGGGCGGCCCT
GGGATGTTCCACATGTTTAACGCCGAGGTAGGTCCTGCCACTGTGCTGTA
CGGGAACATTGCCCTGACCGTACTAGCACGAGCGTCGGACGTCGCTTCGG
GGGCCTTCGCAGCAGTGGGCGCCGAGGTCAGCCGCGTGCGGAACGGGGTA
AATTTGGTGGTGACGAAAGCTGGGAACAAGGGCATGACCGGGCTTTCTTT
TCGGTACCATGACGCCACTTTGGCCTTCATCACTTGCCATTTTGCCTCGG
ATTCTGGTGGGAAGAAACGCCTGTTGGAACGGCTGGAAAATGCTCGGCAG
ACATTGCGGGAAGTCAAGCTGACGGATGACGAAGGATTCGACGTCCATCT
CCAACATCATCACACGTTCATATTGGGGGATCTGAATTTCCGAATGCGGT
TACGGGCACGTGAAGTCGTGGAGCACGTCGCTCGAACTGTTCGCCAGATG
GGAGCTTCCGTGTGGCAGGAAGGCGAGAGTGAGAGGAGTGAGGCGGTTGA
TACATCCATTACACAGGCGAATGAAGCGGGAGAAATTGGTGACGAAGATA
GCTTATGGGTGAGTACACGCCCCTGGGGCCAAGCAGAGAATGACAGGCGG
CACGAAGACAACAACCATGTCTATGACAAAGAGGGAGGCCTCGACCAAAG
AGCTGATGCAGTGGATCAGGGAATGAACTGGGTGAGCAAAGACTACATGC
AACTCTTCTCTCACGCGGAGGAGGAGCGAGCTGTTGTTTCTTATTTGTCA
AACGCATCTTCCTACATCGGGAGCGATATGTCTTCATTTTCGAGTGCGCA
CAAGGATTCAATCGACATCACATCAGAAAGCGACTGGGACAATAGCAAGG
GGAGAGATTCTACAGGCGACCCCGTAGCCTCGGATTCCGAAAGACACGTG
ACGGACGAGGGATCTACTGCGGCTACCACGGACCCTGCTTTGCCATATTC
TGACTCTTCCGAGAGAAAAGAAAGTGGGAAGCGAGCGAAATCCCCCGAAG
GGTCGTGGTGGAGATGGTTTGACCGGGGGGTTCGAGGGCGGAGGCAGCAT
AGCAGCGGAGGGATAACCAGCGACGCGTTTTCGTCCTTCTCGTCGTCCCA
AGACCAGTTTCTGGTGTTCACCTCGAAAGCTTCAACTTCGACTTCTTCCT
TGTGGGGTTGGGTGGAAGAGGACGACGAGCTGAGGCGGGAAATACGGACG
GGCCAAGCGTTCGCCGATTTTCGCGAGGGGCCCTTGACATTCCCGCCCTC
GTTCCGGTGGCGCCGGGGGGGATGTGCCGGCGATTTCAGCGACGCCAAAC
GGATGGCGGATGCCTACGTGTTGGTCAAGAAAGGGGACGGAGAGCGCGTA
CCCTCCTACACGGACAGAATTCTCTTCCATTCCCTCTCAGACGTGCGATG
CTACCTGCGTCTGATCGCGTACCGAATGTGTGAACACGTCCGAGGCTCCG
ATCATCGACCGGTATCGGCAGCCTTTCAACTGACCGTGAACCGCAGGCGG
ATCGGGTTTCGTTTGGATTCCCCAGAAGCTGGCACGGTCTCGCCTGAAAC
ACCAATGGACTACGCGGGGGCCTCCACGTGGCGTGTGCAATTGTCCAGAG
CGCGTTACACGCCCTACCGCGATCAACCTTCCTTGGCGCAAGGGGATCCT
CCGAGGAATGTGTCCACTTTCAAGGAAAGAGCATCGCCTTGCTCAAGCAG
CCACCCAACTGGTACACCCTCCGTCAGAATCAAGGGCACGTCGTCATCCA
AACTTGTCATCGGAGCAGAGGCCGGGTGGAAAGTGACGGTTTACTTCCCT
TGTGTCCTCGAAGATCCCTTCGCCGCGGACGCCAAGATCCAAGACTTGGA
AAAGGCACTTCTGGAGGAGGAAGACGACTCGGGGATTCGAAGGGTCCGTG
ATCAAATCCGCAGGGCACTCGACTCAAGGGGCATGCAAAGATGCCATCGA
GTAGACTGGGGAGAGCTCGCGAGCAGCCAAGGTCTAACATTTGACGTCTT
GGTGCTTCCGGAGGTCTCCCGTCACGCCTTGGTCAGGATTGTGGAACCAC
GGACAGGAGTGGAGGTAGGCCAAGGGGTTATTTGCCTCAGGCAAGCGTTT
GTCAATACATTACCTGCAGGCACGTCCGCGAGCCTGCGAGCCCGCAAATG
GGTCAGAGCGGTGTGGCACCGGAGAGGCCCACCCGAGGGAGTGGAGCTTT
TGATATCCAAGCAAGGCAAAGCTGTCGGGAAAATGCACTTGCAGCTCAAA
ATCCGGCGGCACAAGGATTGTTGATGAAAGCAACTACACATGTATA back to topprotein sequence of rna1271 >rna1271-protein ID=rna1271-protein|Name=rna1271|organism=Nannochloropsis gaditana|type=polypeptide|length=402bp
MATLHISNLTLTIYNHGIFVLMSAALSFLLIVWRFSLAEAGRSHHFEGPS
SNPVKPHSITIVGSGNFGSAIARLLGRNVLRSPKHFRSEVRMWVFEEELD
DGRKLSDVINADHENVKYLPGIQLPTNVRAVPDLSDAVRNASIVVFVLPH
QFLPGLLPRISSCLHRGAMAVSLVKGLDFDDEGPVLITDMIREGLGEDVS
EVCVLMGANVADEMARDEFCEATLGCPDPEGAGAVLQQLFDCPTFRVEVT
PDPIGVELCGALKNVVALAAGFCDGLDWGGNTKAAIIRRGLEEMRLFCKL
LHPSVRDMTFFESCGVADLITTCYGGRNRKCAETFARAGGTMAWDEIEKE
ELGGQHLQGPQTTSKLHKVLEQKKWLSRFPLFRSVYQIAYQGRPPATLVQ
DL back to topmRNA from alignment at CM002457.1:204097..206232- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1271 ID=rna1271|Name=rna1271|organism=Nannochloropsis gaditana|type=mRNA|length=2136bp|location=Sequence derived from alignment at CM002457.1:204097..206232- (Nannochloropsis gaditana)
GACATCAAAAGATGTTGCGTTGGAAAACAAAGAGTAGTCAATTCATGGCA
TGCAAGCAAGGGTCGTTCTAACACGTGGATATGGCCTTGTGGTGTGCTGG
AACTTGAGACATACCGATCAGTGCTAACTATTCCCGGCTAGAAGCGAGTA
GTACGTTGTCGCTGGCGTCAAATTTCTGCTACGCTTTCTCTTTCACCCTT
CAGCACCCCTAATAACTAAAATGAGCTAGCTGTAGACTGATTTCCAGGGA
TAAGGGTGAGAAATCCTTATGATTCTCTTGCTTACAAGTGCTTACACATA
TTGATAGGTCACTCTCGCAAGACTTCACGTCCTCTTGGTGCCTTCAACTG
CTCCCTTGATAGACCAGGACCGTATGGCCACATTACACATTTCTAACCTG
ACGCTAACCATCTACAACCACGGGATATTTGTTTTGATGTCCGCTGCTTT
ATCCTTTCTCTTGATAGTTTGGAGATTCTCCCTGGCTGAAGCGGGCCGAT
CTCACCATTTTGAAGGACCGTCTTCTAACCCCGTGAAGCCTCACAGTATA
ACTATCGTGGGTAGCGGCAACTTTGGATCCGCAATAGCCCGCCTTCTGGG
GCGAAATGTTTTGCGGTCGCCCAAACACTTCAGGTCGGAGGTGCGCATGT
GGGTCTTTGAGGAAGAGCTGGACGACGGGCGGAAACTCAGCGACGTCATC
AATGCTGATCACGAGAATGTAAAGTATTTGCCGGGCATACAACTACCTAC
AAACGTTCGTGCGGTCCCAGACCTAAGTGATGCTGTCCGAAATGCATCCA
TTGTCGTCTTTGTGCTACCGCATCAATTTCTTCCCGGCTGTAAGTGCGTC
AGGGGAGGGGAAGAGAAGTGGTTGGGTACGACGAGAAACCTGCGCAAACA
TGTCTATGAAGTAATGTGACTGTTGCTGCAAGAGATAATGTTCAATGTCT
AGACACTCGCTAGTGAGATAGATATATTTGAGGGAGGGATAGGAAGGATC
AGGGTGGAAAGGGAGGGAAGAAGGGAGGGAGGGAGGGAGGCGGGGGAAGC
CATCTCAATGTACCCATGCCTCTGGCCCACCGATGCATCAAAAGAGAGGA
TTCTCGGGCTTGATTTTTTGTTTGTGCGTAGGCTGGTTTTAAGTAGTCTT
CTTCCTGTCACACATCGCACACAGTGCTCCCGCGGATCTCTTCATGCCTA
CACCGGGGGGCCATGGCTGTCTCCCTCGTCAAGGGACTGGACTTCGATGA
CGAAGGGCCCGTCCTTATCACGGACATGATCCGTGAGGGTTTGGGTGAGG
ATGTCTCCGAAGTCTGTGTCTTGATGGGCGCCAACGTGGCGGATGAAATG
GCCCGGGACGAATTTTGTGAGGCGACCTTGGGGTGCCCCGATCCCGAAGG
CGCCGGGGCGGTGCTTCAGCAGCTTTTCGATTGCCCCACCTTCCGGGTGG
AAGTAACCCCGGACCCGATCGGCGTGGAGCTCTGTGGAGCCCTCAAGAAT
GTGGTGGCCTTGGCGGCCGGATTCTGCGATGGCTTGGACTGGGGCGGGAA
TACCAAGGTGGGTCTCGGCGGGAAGTGCGTGGGGTGGGCCATCAAAACCC
CCTTGGCTTCGCCACTCACCGGACTATCGTGACGGATTGAGGGGTCGAGC
GTTGCTTTGGATCGTACGTTCCACATTTCCCAAAGTCATTGACCTGGGTC
TCCTTCCTTTGCCAATGCGGCGCGCTCACAGGCAGCCATCATCCGGCGGG
GCCTGGAGGAAATGCGGTTATTCTGCAAATTGTTGCATCCCAGCGTCCGG
GACATGACGTTTTTCGAGAGCTGCGGGGTGGCAGATTTGATCACAACCTG
CTACGGTGGGAGGAACCGAAAATGCGCGGAAACGTTCGCCAGGGCGGGGG
GTACCATGGCTTGGGATGAGATTGAGAAAGAGGAGCTGGGGGGACAGCAC
TTGCAGGGACCTCAAACGACGTCGAAGCTACACAAAGTGCTCGAGCAGAA
GAAGTGGCTGAGTAGGTTCCCCCTCTTCCGGTCTGTGTACCAGATCGCCT
ACCAGGGAAGGCCGCCCGCCACCTTGGTGCAGGATTTGTAACATGCGTGA
CTCGTAAAGCAACAACCCAGGACATTCATAACCTTC back to topCoding sequence (CDS) from alignment at CM002457.1:204097..206232- >rna1271 ID=rna1271|Name=rna1271|organism=Nannochloropsis gaditana|type=CDS|length=3627bp|location=Sequence derived from alignment at CM002457.1:204097..206232- (Nannochloropsis gaditana)
GCAGCCATCATCCGGCGGGGCCTGGAGGAAATGCGGTTATTCTGCAAATT
GTTGCATCCCAGCGTCCGGGACATGACGTTTTTCGAGAGCTGCGGGGTGG
CAGATTTGATCACAACCTGCTACGGTGGGAGGAACCGAAAATGCGCGGAA
ACGTTCGCCAGGGCGGGGGGTACCATGGCTTGGGATGAGATTGAGAAAGA
GGAGCTGGGGGGACAGCACTTGCAGGGACCTCAAACGACGTCGAAGCTAC
ACAAAGTGCTCGAGCAGAAGAAGTGGCTGAGTAGGTTCCCCCTCTTCCGG
TCTGTGTACCAGATCGCCTACCAGGGAAGGCCGCCCGCCACCTTGGTGCA
GGATTTGTAATGCTCCCGCGGATCTCTTCATGCCTACACCGGGGGGCCAT
GGCTGTCTCCCTCGTCAAGGGACTGGACTTCGATGACGAAGGGCCCGTCC
TTATCACGGACATGATCCGTGAGGGTTTGGGTGAGGATGTCTCCGAAGTC
TGTGTCTTGATGGGCGCCAACGTGGCGGATGAAATGGCCCGGGACGAATT
TTGTGAGGCGACCTTGGGGTGCCCCGATCCCGAAGGCGCCGGGGCGGTGC
TTCAGCAGCTTTTCGATTGCCCCACCTTCCGGGTGGAAGTAACCCCGGAC
CCGATCGGCGTGGAGCTCTGTGGAGCCCTCAAGAATGTGGTGGCCTTGGC
GGCCGGATTCTGCGATGGCTTGGACTGGGGCGGGAATACCAAGATGGCCA
CATTACACATTTCTAACCTGACGCTAACCATCTACAACCACGGGATATTT
GTTTTGATGTCCGCTGCTTTATCCTTTCTCTTGATAGTTTGGAGATTCTC
CCTGGCTGAAGCGGGCCGATCTCACCATTTTGAAGGACCGTCTTCTAACC
CCGTGAAGCCTCACAGTATAACTATCGTGGGTAGCGGCAACTTTGGATCC
GCAATAGCCCGCCTTCTGGGGCGAAATGTTTTGCGGTCGCCCAAACACTT
CAGGTCGGAGGTGCGCATGTGGGTCTTTGAGGAAGAGCTGGACGACGGGC
GGAAACTCAGCGACGTCATCAATGCTGATCACGAGAATGTAAAGTATTTG
CCGGGCATACAACTACCTACAAACGTTCGTGCGGTCCCAGACCTAAGTGA
TGCTGTCCGAAATGCATCCATTGTCGTCTTTGTGCTACCGCATCAATTTC
TTCCCGGCTGCAGCCATCATCCGGCGGGGCCTGGAGGAAATGCGGTTATT
CTGCAAATTGTTGCATCCCAGCGTCCGGGACATGACGTTTTTCGAGAGCT
GCGGGGTGGCAGATTTGATCACAACCTGCTACGGTGGGAGGAACCGAAAA
TGCGCGGAAACGTTCGCCAGGGCGGGGGGTACCATGGCTTGGGATGAGAT
TGAGAAAGAGGAGCTGGGGGGACAGCACTTGCAGGGACCTCAAACGACGT
CGAAGCTACACAAAGTGCTCGAGCAGAAGAAGTGGCTGAGTAGGTTCCCC
CTCTTCCGGTCTGTGTACCAGATCGCCTACCAGGGAAGGCCGCCCGCCAC
CTTGGTGCAGGATTTGTAATGCTCCCGCGGATCTCTTCATGCCTACACCG
GGGGGCCATGGCTGTCTCCCTCGTCAAGGGACTGGACTTCGATGACGAAG
GGCCCGTCCTTATCACGGACATGATCCGTGAGGGTTTGGGTGAGGATGTC
TCCGAAGTCTGTGTCTTGATGGGCGCCAACGTGGCGGATGAAATGGCCCG
GGACGAATTTTGTGAGGCGACCTTGGGGTGCCCCGATCCCGAAGGCGCCG
GGGCGGTGCTTCAGCAGCTTTTCGATTGCCCCACCTTCCGGGTGGAAGTA
ACCCCGGACCCGATCGGCGTGGAGCTCTGTGGAGCCCTCAAGAATGTGGT
GGCCTTGGCGGCCGGATTCTGCGATGGCTTGGACTGGGGCGGGAATACCA
AGATGGCCACATTACACATTTCTAACCTGACGCTAACCATCTACAACCAC
GGGATATTTGTTTTGATGTCCGCTGCTTTATCCTTTCTCTTGATAGTTTG
GAGATTCTCCCTGGCTGAAGCGGGCCGATCTCACCATTTTGAAGGACCGT
CTTCTAACCCCGTGAAGCCTCACAGTATAACTATCGTGGGTAGCGGCAAC
TTTGGATCCGCAATAGCCCGCCTTCTGGGGCGAAATGTTTTGCGGTCGCC
CAAACACTTCAGGTCGGAGGTGCGCATGTGGGTCTTTGAGGAAGAGCTGG
ACGACGGGCGGAAACTCAGCGACGTCATCAATGCTGATCACGAGAATGTA
AAGTATTTGCCGGGCATACAACTACCTACAAACGTTCGTGCGGTCCCAGA
CCTAAGTGATGCTGTCCGAAATGCATCCATTGTCGTCTTTGTGCTACCGC
ATCAATTTCTTCCCGGCTGCAGCCATCATCCGGCGGGGCCTGGAGGAAAT
GCGGTTATTCTGCAAATTGTTGCATCCCAGCGTCCGGGACATGACGTTTT
TCGAGAGCTGCGGGGTGGCAGATTTGATCACAACCTGCTACGGTGGGAGG
AACCGAAAATGCGCGGAAACGTTCGCCAGGGCGGGGGGTACCATGGCTTG
GGATGAGATTGAGAAAGAGGAGCTGGGGGGACAGCACTTGCAGGGACCTC
AAACGACGTCGAAGCTACACAAAGTGCTCGAGCAGAAGAAGTGGCTGAGT
AGGTTCCCCCTCTTCCGGTCTGTGTACCAGATCGCCTACCAGGGAAGGCC
GCCCGCCACCTTGGTGCAGGATTTGTAATGCTCCCGCGGATCTCTTCATG
CCTACACCGGGGGGCCATGGCTGTCTCCCTCGTCAAGGGACTGGACTTCG
ATGACGAAGGGCCCGTCCTTATCACGGACATGATCCGTGAGGGTTTGGGT
GAGGATGTCTCCGAAGTCTGTGTCTTGATGGGCGCCAACGTGGCGGATGA
AATGGCCCGGGACGAATTTTGTGAGGCGACCTTGGGGTGCCCCGATCCCG
AAGGCGCCGGGGCGGTGCTTCAGCAGCTTTTCGATTGCCCCACCTTCCGG
GTGGAAGTAACCCCGGACCCGATCGGCGTGGAGCTCTGTGGAGCCCTCAA
GAATGTGGTGGCCTTGGCGGCCGGATTCTGCGATGGCTTGGACTGGGGCG
GGAATACCAAGATGGCCACATTACACATTTCTAACCTGACGCTAACCATC
TACAACCACGGGATATTTGTTTTGATGTCCGCTGCTTTATCCTTTCTCTT
GATAGTTTGGAGATTCTCCCTGGCTGAAGCGGGCCGATCTCACCATTTTG
AAGGACCGTCTTCTAACCCCGTGAAGCCTCACAGTATAACTATCGTGGGT
AGCGGCAACTTTGGATCCGCAATAGCCCGCCTTCTGGGGCGAAATGTTTT
GCGGTCGCCCAAACACTTCAGGTCGGAGGTGCGCATGTGGGTCTTTGAGG
AAGAGCTGGACGACGGGCGGAAACTCAGCGACGTCATCAATGCTGATCAC
GAGAATGTAAAGTATTTGCCGGGCATACAACTACCTACAAACGTTCGTGC
GGTCCCAGACCTAAGTGATGCTGTCCGAAATGCATCCATTGTCGTCTTTG
TGCTACCGCATCAATTTCTTCCCGGCT back to top
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