Naga_100287g2, gene1136 (gene) Nannochloropsis gaditana

Overview
NameNaga_100287g2
Unique Namegene1136
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:1413659..1415827 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100287g2
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:1413659..1415827 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL053ngnoL053Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL050ngnoL050Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO03G00530NO03G00530Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna1180rna1180-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna1180rna1180Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna1180

>rna1180-protein ID=rna1180-protein|Name=rna1180|organism=Nannochloropsis gaditana|type=polypeptide|length=581bp
MTFLAVGPFTTVLLHMFLYQAKIRGKTMKPHPPLRKVTPGQRPSFLLCSI
SLLVFLIVSFAAEQPAAKISPQEEENVFVATTEWQAIPPGASVPPGLHVK
LDLSTGERLGKLMDGPERQALRPAGQRKEESALQATDVAGFKSNKTGAKG
ILDSVVIKNTPEETLEASQGPPLSRRGTMLKVLSGLPPQERASMGIDSLL
ASRPRAGEALGEEVVEGEEREEERAFWKQVETLWAERQDLLLQAYENMLK
PAEELGRLIGVLKEGGEEEVMRALMELEDWLSDVDMAQDFYTLGGWPLLV
SKLGWEGGREGGREVQWRAAWVVGNAVKNDRHFQAWVLEGGKEGGASALT
RLLTICREGGTEAWGEGEEEEELLRKAVYAVTSAARGNPAVQAKLVEEGG
LEVLGHLLHSSVPPSPGSSHQRKGQRRALCLKLIAFAQDLALEAKQAVAA
ALEVAEARHPPSIPPSLPPSLLAGVTSPAWCEGILGLLEEVVGGEGGREA
RALEGVLEAMQLLHVDCVRQGRWEEGGREVERLLRRAREVVEEEDWKEGV
DREYWEDLVNLIEALLEETREGGRAGGREEL
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Synonyms
Publications