NO03G00530, NO03G00530 (gene) Nannochloropsis oceanica

Overview
NameNO03G00530
Unique NameNO03G00530
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1671
Alignment locationchr3:163440..165110 -

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Properties
Property NameValue
DescriptionArmadillo-like helical
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr3genomechr3:163440..165110 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
Vocabulary: INTERPRO
TermDefinition
IPR016024ARM-type_fold
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Homology
BLAST of NO03G00530 vs. NCBI_GenBank
Match: EWM29500.1 (Armadillo-like helical [Nannochloropsis gaditana])

HSP 1 Score: 374.4 bits (960), Expect = 5.500e-100
Identity = 249/518 (48.07%), Postives = 299/518 (57.72%), Query Frame = 0
Query:   55 KEENVFHATNEWQPIPRDASVPPGLHVKLDLSTGERLGKLLDADETAQAAATGAAGTAVSTSSTFIPLNQNKSQNGGGLLDSITIKNTPEEALDAASGPLPTRRETMLKVISNLPPVERASMGVDALLATRP----------PDLSHPEEEEVFWQKVEGLWEERQAMLQQAYDNMLKPAEELGRLIQVLREGAGEEGLLLQALIELEDWLSDVDMAQDFYTLGGWPLL-----------------------------------GWVLEKGKEGEGDSALTLLVEILREAAEGGVEG-EEREHGEELLRKTVYALTSAARGNALVQSQLLKEGGLEVMGRLLASSPXXXXXXXXQ-----RALRLKLVAFAHDMILEARQGQEARSDDADL-----------------VPGGVGLAGXXXXXXXXXXXXXXAQAVETEKVVEALGLLHGGCSGHGHW--GGREVVGRVVRRAREEVGRERWAEGVNPEYHQELLGMLEELAREV-EGERGGEAGRERV 502
            +EENVF AT EWQ IP  ASVPPGLHVKLDLSTGERLGKL+D  E       G      +  +T +   ++      G+LDS+ IKNTPEE L+A+ GP  +RR TMLKV+S LPP ERASMG+D+LLA+RP           +    EEE  FW++VE LW ERQ +L QAY+NMLKPAEELGRLI VL+EG  EE  +++AL+ELEDWLSDVDMAQDFYTLGGWPLL                                    WVLE GKEG G SALT L+ I R   EGG E   E E  EELLRK VYA+TSAARGN  VQ++L++EGGLEV+G LL SS         Q     RAL LKL+AFA D+ LEA+Q   A  + A+                  V       G               +A   E V+EA+ LLH  C   G W  GGRE V R++RRARE V  E W EGV+ EY ++L+ ++E L  E  EG R G  GRE +
Sbjct:   73 EEENVFVATTEWQAIPPGASVPPGLHVKLDLSTGERLGKLMDGPERQALRPAGQRKEESALQATDVAGFKSNKTGAKGILDSVVIKNTPEETLEASQGPPLSRRGTMLKVLSGLPPQERASMGIDSLLASRPRAGEALGEEVVEGEEREEERAFWKQVETLWAERQDLLLQAYENMLKPAEELGRLIGVLKEGGEEE--VMRALMELEDWLSDVDMAQDFYTLGGWPLLVSKLGWEGGRXXXXXVQWRAAWVVGNAVKNDRHFQAWVLEGGKEG-GASALTRLLTICR---EGGTEAWGEGEEEEELLRKAVYAVTSAARGNPAVQAKLVEEGGLEVLGHLLHSSVPPSPGSSHQRKGQRRALCLKLIAFAQDLALEAKQAVAAALEVAEARHPPSXXXXXXXXXXXGVTSPAWCEGILGLLEEVVGGEGGREARALEGVLEAMQLLHVDCVRQGRWEEGGRE-VERLLRRAREVVEEEDWKEGVDREYWEDLVNLIEALLEETREGGRAG--GREEL 581          
BLAST of NO03G00530 vs. NCBI_GenBank
Match: XP_008608043.1 (hypothetical protein SDRG_04159 [Saprolegnia diclina VS20] >EQC38451.1 hypothetical protein SDRG_04159 [Saprolegnia diclina VS20])

HSP 1 Score: 90.1 bits (222), Expect = 2.100e-14
Identity = 93/351 (26.50%), Postives = 149/351 (42.45%), Query Frame = 0
Query:   59 VFHATNEWQPIPRDASVPPGLHVKLDLSTGERLGKLLDADETAQAAATGAAGTAVSTSSTFIPLNQNKSQNGGGLLDSITIKNTPEEALDAASGPLPTRRE-----TMLKVISNLPPVERASMGVDALLATRPPDL-------SHPE-EEEVFWQKVEGLWEERQAMLQQAYDNMLKPAEELGRLIQVLREGAGEEGLLLQALIELEDWLSDVDMAQDFYTLGGWPLLGWVLEKGKEGEGDSALTLL---VEILREAAEGGVEGEEREHGEELL-------------RKTVYALTSAARGNALVQSQLLKEGGLEVMGRLLASSPXXXXXXXXQRALRLKLVAFAHDMILE 381
            +F  T+EWQ I  + ++P GLHV+++L+TG++  KLL  D+   + AT              P N    +     L ++  K T +EA         T+ E     ++  V++ LP                PP L       +H    +E F   VE LW+ RQA L++A + +   A+ +  LI  L         +L AL +LE  + D+D A+DF TLGG  +    L          A+ ++   V+   EA    ++     H  E L             RK +YAL++  +GNA  Q+  L + G+ ++  L A++            LRLK V   H ++ E
Sbjct:   64 LFEPTSEWQEILPNQAIPGGLHVRINLATGKKEAKLLSKDDXXXSDAT--------------PANVPTPKVAASKLTAVASKPTGQEAASDVVAAPETKEEHRISDSLYNVLAGLP---------------EPPVLDGINIHEAHAHLSKEAFAAYVEKLWKARQAELKEASEAIRNEAQYMQTLIDALLAPTTPTDDVLDALTQLEWEVQDLDKARDFNTLGGLAVTVQFLNATDLDVRAQAMWVVGSAVKHFEEAQTWALQAGAVPHLLESLAMPLQDKAVVAMQRKALYALSALIQGNAKCQAVFLSQDGIRILNALAANTEAPL-------QLRLKAVLVLHHLLAE 378          
BLAST of NO03G00530 vs. NCBI_GenBank
Match: XP_002178790.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC49488.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 90.1 bits (222), Expect = 2.100e-14
Identity = 107/395 (27.09%), Postives = 171/395 (43.29%), Query Frame = 0
Query:   62 ATNEWQPIPRDASVPPGLHVKLDLSTGERLGKLLDADETAQAAATGAAGTAVSTSSTFIPLNQNKSQNGGGLLDSITIKNTPEEALDAASGPLPTRRETMLKVISNLPPVERASM-GVDALLATRPPDLSHPEEEEVFWQKVEGLWEERQAMLQ--QAYDNMLKPA---EELGRLIQVLREGAGE-----EGLLLQALIELEDWLSDVDMAQDFYTLGGWPLL--------------------------------------GWVLEKGKEGEGDSA------LTL----------------LVEILREAAEGGVEGEEREHGEELLRKTVYALTSAARGNALVQSQLLKE--GGLEVMGRL--LASSPXXXXXXXXQRALRLKLVAFAHDMILEA 382
            AT EW  +  + +V  G+HV++DLSTGE+  KL D D+  +  A  A     +  +      Q+++        S T     ++++ A           M + +++LP  E+A M G+ AL  +    L+ PE+ E F  ++  LWEERQA L+  QA      PA     + +L   LR+ + +     + +++  L +LED L D+DMA+DF+TLGGWP+L                                       WVL    +  G+ A      LTL                L  +L +     +  E     E+L  KT+YAL S  RGNAL Q++ L++  G  ++  R+  L ++            L  +L+A A D++ EA
Sbjct:   46 ATREWTLLRENDTVAAGMHVRMDLSTGEKWVKLPDEDDNDENNAAAAVEIQPNDGAEVSFTAQHQT--------SPTDPQAEQQSIHAYD------FVKMHETLTSLPEDEQARMGGIPALPGSTLSSLT-PEQREAFATRMAQLWEERQAELREFQAEFEADLPAILRTRIAQLQDYLRDPSADALDPSQSIIVSVLRDLEDQLVDLDMARDFHTLGGWPVLVALVTDDAHQPPFWQQSPNQTDTSTETASHVRSIQAHAAWVLGTAVKNTGEFAPWALEELTLGNESSIARQTIATTSTLRVVLDQFLASTLPQETSPALEQLQVKTLYALGSLLRGNALAQARFLRDYHGPDQLASRVNTLLATGDVRGVSRHTTKLTNRLMALATDLLAEA 425          
BLAST of NO03G00530 vs. NCBI_GenBank
Match: CBJ25590.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 87.4 bits (215), Expect = 1.400e-13
Identity = 112/410 (27.32%), Postives = 162/410 (39.51%), Query Frame = 0
Query:  109 AGTAVSTSSTFIPLNQNKSQNGGGLLDSIT-IKNTPEEALDAASGPLPTRRETMLKVISNLPPVERASMGVDALLATRPPDLSHPEEEEVFWQKVEGLWEERQAMLQQAYDNMLKPAEELGRLIQVLREGAGEEGLLLQALIELEDWLSDVDMAQDFYTLGGWPLLG-------------------------------WVLEKGKEGEGDSALTLLVEILREAAEGGVEGEEREHGEELLRKTVYALTSAARGNALVQSQLLKEGGLEVMGRLLASSPXXXXXXXXQRALRLKLVAFAHDMILEARQGQEARSDDADLVPGGVGLAGXXXXXXXXXXXXXXAQAVETEKVVEALGLLHGGCSGHGHWGGREVVGRVVRRARE-EVGRERWAEGVNPEYHQELLGMLEELA 486
            A + VS  ST   +  N        L SI  + + P E  DAA      R + ML  + ++P  ER  M +D + A R    S P  E +   K++GLWE RQ  L++AYD M K  E L   I +L      +G L  AL +LED LSD+DMA+DF+T+GG+P L                                W LE G + +  S L LL+E    A               L  K VYAL++    +  VQ Q     G  V+  +  +           R +R+K +    D++ EA +G  A +  A +  G    +G                    EK +EA+      C     +   +   R+   A++         E    E+H+EL   LEE A
Sbjct:    6 AMSLVSMESTDDAIMGNPFDLSTEALASIADLDDYPIEDNDAA------RADRMLAALESIPEGERQGMDLD-VEALR----SKPLAERL--AKLQGLWEVRQQELREAYDAMPKVNELLMERIDILNNADATDGALTGALTDLEDLLSDIDMARDFHTIGGFPTLASMLRCSRPEGVRELAAWAVGTAVKNEPEHQLWALEDGPDSQ-PSVLALLLENAMAATT-----------PTLRSKVVYALSACLTNSGDVQLQFGSRMGEAVLSAMYGAD-------GSDRRVRMKTLTLMSDLLQEAARGSPA-AVLATMPVGSTASSGGAWCRRVDEALQHAHSPAALEKAIEAVQSFTPSC--RDQFAQLDTKRRLEGLAQQCRSSPPEGFEVAEEEFHKELTQKLEECA 380          
BLAST of NO03G00530 vs. NCBI_GenBank
Match: XP_012202048.1 (hypothetical protein SPRG_07521 [Saprolegnia parasitica CBS 223.65] >KDO27272.1 hypothetical protein SPRG_07521 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 81.3 bits (199), Expect = 9.700e-12
Identity = 87/338 (25.74%), Postives = 144/338 (42.60%), Query Frame = 0
Query:   59 VFHATNEWQPIPRDASVPPGLHVKLDLSTGERLGKLLDADETAQAAATGAAGTAVSTSSTFIPLNQNKSQNGGGLLDSITIKNTPEEALDAASGPLPTRRETMLKVISNLPPVERASMGVDALLATRPPDLSHPEEEEVFWQKVEGLWEERQAMLQQAYDNMLKPAEELGRLIQVLREGAGEEGLLLQALIELEDWLSDVDMAQDFYTLGGWPLLGWVLEKGKEGEGDSALTLL---VEILREAAEGGVEGEEREHGEELL-------------RKTVYALTSAARGNALVQSQLLKEGGLEVMGRLLASSPXXXXXXXXQRALRLKLVAFAHDMILE 381
            +F  T EWQ I  + ++P GLHV+++L+TG++  KLL  D+   A         V+TS   +  ++   Q      D +    T EE   +         +++  V++ LP           L      D      +E F   VE LW+ RQA L++A + +   A+ +  LI  L         +L AL +LE  + D+D A+DF TLGG  +    L          A+ ++   ++   EA    ++     H  + L             RK +YAL++  + NA  Q+ LL + G+ ++  L A++            LRLK V   H ++ E
Sbjct:   51 LFEPTREWQEILPNQAIPGGLHVRINLATGKKEAKLLTDDDDIDATPANVPTPEVATSELTVVASELVGQVTPS--DVVASPETKEEHRIS---------DSLYNVLAGLPE-------PPVLDGINIHDAHAHLSKEAFAAYVEKLWKARQAELKEASEAIRNEAKYMQTLIDALLAPTTPTDDVLDALTKLEWEVQDLDKARDFNTLGGLVVTVQFLNATDLAVRAQAMWVVGSAIKHFEEAQNWALQAGAVPHLLQSLAMPISDKAVVAMQRKALYALSALLQSNAKCQAVLLAQDGVRILNALAANA-------NAPLQLRLKAVLVLHHLLAE 363          
BLAST of NO03G00530 vs. NCBI_GenBank
Match: CCI40310.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 79.3 bits (194), Expect = 3.700e-11
Identity = 89/358 (24.86%), Postives = 163/358 (45.53%), Query Frame = 0
Query:   60 FHATNEWQPIPRDASVPPGLHVKLDLSTGERLGKLLDADE-TAQAAAT-------GAAGTAVSTSSTFIPLNQNKSQNGGGLLDSITIKNTPEEALDAASGPLPTRRETMLKVISNLP-PVERASMGVDALLATRPPDLSHPEEEEVFWQKVEGLWEERQAMLQQAYDNMLKPAEELGRLIQVLREGAGEEGLLLQALIELE--DW-LSDVDMAQDFYTLGGWPLL---------------GWVLEKGKEGEGDSAL-----TLLVEILRE-AAEGGVEGEEREHG---EELLRKTVYALTSAARGNALVQSQLLKEGGLEVMGRLLASSPXXXXXXXXQRALRLKLVAFAHDMILEA 382
            F ATN+WQ + +  SVPPGLHV+++L TG+R  KLLDA+E  A  AA        G+ G  + TS++ +   +   +      D++ I N  E  +           E M +++++LP P +  +M ++        +      ++ F +++  LW+ RQA L+ A D +   ++  G LI    E AG EG + + L+ LE  +W + D+D    F+ +GG+  +                WV+    +   D+ +      ++  +L++ A E  +  + ++      E  +K +YA+TS  R     +   L+  G   +G+    S            +++K +   HD ++EA
Sbjct:   69 FVATNDWQELLQGQSVPPGLHVRVNLQTGKREAKLLDANEKEADNAAVLVDSPDEGSEG-VLQTSASAVGEVKEDHEATDKSYDNVEILNESESFVPKEP---DWNHEKMYELLNSLPEPPKVGNMDIN--------EAQKKLSKDEFRREIIRLWKNRQADLKLALDALQNDSKYQGELIHSFHE-AGLEGKVEEQLVILEKLEWEVQDLDKTHIFHYIGGFDFVLEQLNASDLRIAASACWVIGTACKYYDDAQVWAIDAGVMPRLLQQLAVESSITSDNQDQQLSIWEARKKALYAITSIMRSQDRARKLFLQFDGERALGQFFGGSAPYN--------VQIKALFLVHDTLVEA 405          
BLAST of NO03G00530 vs. NCBI_GenBank
Match: XP_024586190.1 (RxLR-like protein [Plasmopara halstedii] >CEG49821.1 RxLR-like protein [Plasmopara halstedii])

HSP 1 Score: 77.0 bits (188), Expect = 1.800e-10
Identity = 91/366 (24.86%), Postives = 164/366 (44.81%), Query Frame = 0
Query:   60 FHATNEWQPIPRDASVPPGLHVKLDLSTGERLGKLLDADETAQ------AAATGAAGTAVSTSSTF--------IPLNQNKSQNGGGLLDSITIKNTPEEALDAASGPLPT-----RRETMLKVISNLPPVERASMGVDALLATRPPDLSHPEEEEVFWQKVEGLWEERQAMLQQAYDNMLKPAEELGRLIQVLREG--AGEEGLLLQALIELEDWLSDVDMAQDFYTLGGWPL---------------LGWVL-------EKGKEGEGDS-ALTLLVEILREAAEGGVEGEEREHGEELLRKTVYALTSAARGNALVQSQLLKEGGLEVMGRLLASSPXXXXXXXXQRALRLKLVAFAHDMILEA 382
            F AT+EWQ +  D  VP GLH++L++ TG+R  K+++ D+ ++      A  + A    +S ++          I  + + + + G   D+    +   E+ D     +P        E M +V+  LP   +   G+D  LA     L+  E    F  ++  LW+ RQA L+ A +++   A+ LG+L+Q L E    G+    L  L  LE  + D+D    F  +GG+ +               + WV+         G+E   D+  + LL+E L+   +   + ++     E+ +K++YAL+S  R NA  Q   L   G  ++  +   +            L+LK++ F +D+++EA
Sbjct:   51 FVATSEWQELLPDQVVPRGLHIRLNMETGKREAKMVETDKESEEHMRAIAIGSNAQEATISVATDISGNVVMGEIADDIHLATDEGDKYDAFEDYSGNGESNDGDQDEVPPAEPNWNHEKMYEVLQALPEPPKID-GMDIHLA--HDKLTAAE----FRNQIVTLWKRRQAELKVALESLQDDAKYLGKLLQQLNEAEQRGDTDNQLSVLEVLEWEVQDLDKTHVFNYIGGFGVVAKYLNSTILPVRASVAWVIGSAVKNYRDGQEWAIDAGCIPLLIESLK--LKSSSDKKDATDVLEVKKKSIYALSSIIRANARGQRLFLLHDGPGILAGIFNDA--------YPAKLQLKVLFFVYDLMVEA 399          
BLAST of NO03G00530 vs. NCBI_GenBank
Match: XP_019362099.1 (PREDICTED: nucleotide exchange factor SIL1 isoform X2 [Gavialis gangeticus])

HSP 1 Score: 75.1 bits (183), Expect = 7.000e-10
Identity = 108/467 (23.13%), Postives = 182/467 (38.97%), Query Frame = 0
Query:   49 EEKQICKEENVFHATNEWQPIPRDASVPPGLHVKLDLSTGERLGKLLDADETAQAAATGAAGTAVSTSSTFIPLNQNKSQNGGGLLDSITIKNT--PEEALDAASGPLPTRRETMLKVISNLPPVERASMGVDALLATRPPDLSHPEEEEVFWQKVEGLWEERQAMLQQAYDNMLKPAEELGRLIQVLREGAGEEGLLLQALIELEDWLSDVDMAQDFYTLGGWPLL-------GWVLEKGKEGEGDSALTLLVEILREAAEGGVEGE-----EREHGEELLRKTVYALTSAARGNALVQSQLLKEGGLEVMGRLLASSPXXXXXXXXQRALRLKLVAFAHD-----MILEARQGQEARSDD-------ADLVPGGVGLAGXXXXXXXXXXXXXXAQAVETEKVVEALGLLHGGCSGHGHWGGR-EVVGRVVRRAREEVGRERWAEGVNPEYHQELLGMLEELAREV 489
            E+    ++  VF+ TN WQ +    ++P GLHV+L+L TGE+  KL D                 +T+      +Q K +     LD + I +     + L  A   L    +T   + +NL  V +    ++ L A                      +E+    ++  Y+ M+K   +       L E        + AL +LE ++  VD A+DF +LGG  L+         V+++       +AL+   ++  EA EGG   +       E    + +K ++AL+S  R     Q Q LK GGL+V+  L               AL +++V   +D     M+LE  Q  E + ++         LVP  V                   +    EKV++ + +L   C        R  +   ++R   EE+  E   EG    Y +ELLG +  + +E+
Sbjct:   58 EDDADAEDLEVFYPTNRWQTVHPGQAIPAGLHVRLNLQTGEKEAKLPD-----------------NTNEKSDMKDQKKRKR----LDKVDIDSNSFTSQELKEALAKLKENEKTKSTMEANLEDVRKRFRPIEELKAE---------------------FEQLNMRIETDYEIMVKLINKFNSSDSTLDE-------KIAALYDLEYYVHQVDNAKDFLSLGGLQLMIDGLNSTEAVMKEHAAFVLGAALSSNPKVQIEAIEGGALQKLLVILATEQPLTVKKKALFALSSMLRHFPYAQQQFLKLGGLQVLRNLFKEK--------GMEALYVRVVTLLYDLIMEKMLLEGAQNNEDQMEEKVQQYSQVKLVPAVV----EQDWCAIVSNLLALPEHDTREKVLKTVSVLMTFCKDRYRGDQRLNITLSMLRSEYEELAAEEQREGDKDGYFKELLGSINTIIQEL 463          
BLAST of NO03G00530 vs. NCBI_GenBank
Match: POM66581.1 (Hsp70-like protein [Phytophthora palmivora var. palmivora])

HSP 1 Score: 74.7 bits (182), Expect = 9.100e-10
Identity = 89/365 (24.38%), Postives = 161/365 (44.11%), Query Frame = 0
Query:   60 FHATNEWQPIPRDASVPPGLHVKLDLSTGERLGKLLDADETAQAAATGAA---------GTAVSTSSTFIPLNQNKS------QNGGGLLDSIT--IKNTPEEALDAASGPLPTRRETMLKVISNLPPVERASMGVDALLATRPPDLSHPEEEEVFWQKVEGLWEERQAMLQQAYDNMLKPAEELGRLIQVLR--EGAGEEGLLLQALIELEDWLSDVDMAQDFYTLGGWPLL---------------GWVL----EKGKEGEGDSALTLLVEILREAAEGGVEGEEREHGE--ELLRKTVYALTSAARGNALVQSQLLKEGGLEVMGRLLASSPXXXXXXXXQRALRLKLVAFAHDMILEARQG 385
            F AT+EWQ +     VP GLHV+L+L TG+R  KL+D +E     +  +             VST  T   +N++++      ++G  + D  T   + T  EA +A +       E +  V+  LP   +    V+ +      +   P E   F +++  LW++RQA L++A +++   A+ LG+L +  +  E  G+    L  L  LE  + D+D    F  +GG+ ++                WV+    +  K+G+  +    ++  L ++    +   E    +  E+ +K +YAL+S  R N   Q       G E++  L   +            L+LK++ F +D++ EA +G
Sbjct:   49 FVATDEWQELLPGQGVPRGLHVRLNLETGKREAKLVDPNEPETEESMRSVVXXXXXXXXXVTVSTDITGDIVNEDEALMVTDEESGDDVADVSTDEAELTDVEADEAPAAEPNWNHEKIYDVLQALPEPPK----VEGMDIHEAHEKLSPAE---FRKQIVTLWKKRQAELKEALESLQDDAKYLGKLFEQFKDAEQRGDTDGQLSVLEVLEWEVQDLDKTHVFNFIGGFGIIAEYLNSTNLPIRASAAWVVGSAAKNYKDGQEWAIDAGVIPKLVDSLTLEIPSTETTAKDVLEVKKKAIYALSSLVRSNERGQRLFALHNGPELLAGLFTDA--------HPAKLQLKVLLFVYDLLAEAAEG 398          
BLAST of NO03G00530 vs. NCBI_GenBank
Match: XP_006266892.1 (PREDICTED: nucleotide exchange factor SIL1 isoform X2 [Alligator mississippiensis])

HSP 1 Score: 74.3 bits (181), Expect = 1.200e-9
Identity = 111/470 (23.62%), Postives = 180/470 (38.30%), Query Frame = 0
Query:   49 EEKQICKEENVFHATNEWQPIPRDASVPPGLHVKLDLSTGERLGKLLDADETAQAAATGAAGTAVSTSSTFIPLNQNKSQNGGGLLDSITIKNT--PEEALDAASGPLPTRRETMLKVISNLPPVERASMGVDALLATRPPDLSHPEEEEVFWQKVEGLWEERQAMLQQAYDNMLKPAEELGRLIQVLREGAGEEGLLLQALIELEDWLSDVDMAQDFYTLGGWPLLGWVLEKGKEGEGDSALTLLVEILR-------EAAEGGVEGE-----EREHGEELLRKTVYALTSAARGNALVQSQLLKEGGLEVMGRLLASSPXXXXXXXXQRALRLKLVAFAHD-----MILEARQGQEARSDD-------ADLVPGGVGLAGXXXXXXXXXXXXXXAQAVETEKVVEALGLLHGGCS----GHGHWGGREVVGRVVRRAREEVGRERWAEGVNPEYHQELLGMLEELAREV 489
            E+    ++  VF+ TN WQ +    ++P GLHV+L+L TGE+  KL D                 ST+      +Q K +     LD + I +     + L  A   L    +T   + +NL  V +    ++ L A                      +E     ++  Y+ M+K   +      +L E        + AL +LE ++  VD A+DF +LGG  L+   L   +    + A  +L   L        EA EGG   +       E    + +K ++AL+S  R     Q Q LK GGL+V+  L               AL +++V   +D     M+LE  Q  E + ++         LVP  V                   +    EKV++ + +L   C     G  H     +   ++R   EE+  E   EG    Y +ELLG +  + +E+
Sbjct:   58 EDDADAEDLEVFYPTNWWQTVHPGQAIPAGLHVRLNLQTGEKEAKLPD-----------------STNEKSDMKDQKKRKR----LDKVDIDSNSFTSQELKEALAKLKENEKTKSTMEANLEDVRKRFRPIEELKAE---------------------FERLNMRIETDYEIMVKLINKFNSSDSMLDE-------KIAALYDLEYYVHQVDNAKDFLSLGGLQLMINALNSTEAVMKEHAAFVLGAALSSNPKVQIEAIEGGALQKLLVILATEQPLAVKKKALFALSSMLRHFPYAQQQFLKLGGLQVLRNLFKEK--------GMEALYVRVVTLLYDLIMEKMLLEGAQNNEDQMEEKVQQYSQVKLVPAVVEQGWCAIVSNLLALPEHDTR----EKVLKTVSVLMAFCKDRYRGDQH---LNITLSMLRSEYEELAAEEQREGDKDGYFKELLGSINTIIQEL 463          
The following BLAST results are available for this feature:
BLAST of NO03G00530 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM29500.15.500e-10048.07Armadillo-like helical [Nannochloropsis gaditana][more]
XP_008608043.12.100e-1426.50hypothetical protein SDRG_04159 [Saprolegnia dicli... [more]
XP_002178790.12.100e-1427.09predicted protein [Phaeodactylum tricornutum CCAP ... [more]
CBJ25590.11.400e-1327.32conserved unknown protein [Ectocarpus siliculosus][more]
XP_012202048.19.700e-1225.74hypothetical protein SPRG_07521 [Saprolegnia paras... [more]
CCI40310.13.700e-1124.86unnamed protein product [Albugo candida][more]
XP_024586190.11.800e-1024.86RxLR-like protein [Plasmopara halstedii] >CEG49821... [more]
XP_019362099.17.000e-1023.13PREDICTED: nucleotide exchange factor SIL1 isoform... [more]
POM66581.19.100e-1024.38Hsp70-like protein [Phytophthora palmivora var. pa... [more]
XP_006266892.11.200e-923.62PREDICTED: nucleotide exchange factor SIL1 isoform... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL065nonsL065Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR000ncniR000Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR053ngnoR053Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR050ngnoR050Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005879NSK005879Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO03G00530.1NO03G00530.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|626621gene_1231Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100287g2gene1136Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO03G00530.1NO03G00530.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO03G00530 ID=NO03G00530|Name=NO03G00530|organism=Nannochloropsis oceanica|type=gene|length=1671bp
ATGGCGCGCTCATGGCCACATCAACCCTGTCGTCCTTCTTGCAACACAGT
CCTCGTCGTCCTCTCCACCCTCTCCAGCTGCTCCCTCCTCCTCCTCCTCC
TCCTCCTCCTACCCTCCCCCACCAGCGCAGCAACGGGAGAGAATGAAGAA
AAGCAAATCTGCAAGGAAGAAAACGTCTTTCATGCTACCAACGAATGGCA
GCCCATCCCACGCGATGCATCGGTCCCTCCAGGGTTGCACGTGAAGCTGG
ATTTGTCGACGGGCGAGAGACTGGGCAAGCTCCTAGACGCAGACGAGACA
GCACAAGCAGCAGCAACAGGAGCTGCTGGAACTGCCGTCAGCACTTCCTC
AACTTTCATACCCCTCAACCAGAACAAGTCACAGAATGGAGGAGGGCTGC
TTGATAGCATTACCATCAAAAACACCCCGGAAGAGGCCTTGGACGCGGCC
AGTGGCCCCCTTCCCACTCGCCGGGAAACCATGCTCAAAGTCATCTCCAA
CCTCCCCCCTGTCGAGCGCGCCAGCATGGGTGTCGATGCCCTCCTTGCCA
CTCGTCCTCCTGACTTGTCGCACCCCGAAGAAGAAGAAGTGTTTTGGCAG
AAGGTGGAGGGTTTGTGGGAGGAAAGGCAAGCGATGCTGCAGCAGGCATA
TGACAACATGCTCAAGCCCGCGGAGGAACTGGGGAGGTTGATACAGGTGC
TGAGGGAGGGAGCTGGGGAGGAAGGGTTGCTACTACAAGCATTGATAGAA
TTGGAAGACTGGTTGTCGGATGTGGACATGGCTCAGGACTTTTATACCTT
GGGCGGGTGGCCTTTATTGgtggggaggctagggaggggggagggaagga
ggtgaggtggagagcggcgtgggcggtggggaatgcggtgaagaatgata
ggggatttcagGGATGGGTTTTGGAGAAAGGGAAGGAGGGAGAGGGGGAC
TCTGCGTTGACGCTTTTGGTGGAAATACTGCGGGAGGCGGCGGAGGGCGG
GGTGGAGGGGGAGGAGAGGGAGCACGGGGAGGAGTTGTTGAGGAAGACCG
TATATGCCTTGACATCGGCAGCAAGGGGAAACGCTTTGGTGCAATCCCAA
TTGCTCAAGGAGGGGGGGTTGGAGGTCATGGGTCGCCTCCTCGCCTCCTC
CCCTTCCTCGTCCTCGTCCTCGAGTGGACAGCGGGCTCTTCGATTGAAGC
TTGTTGCCTTTGCTCATGACATGATACTGGAGGCCAGACAAGGACAGGAA
GCCAGgtgggaggtagaggaggcgcgacatcctccctcccccccccctcc
ctccatgcctcccttttggaagGAGTGACGACGCCGACCTGGTGCCAGGG
GGCGTTGGTCTTGCTGGAGGAGGTGGCGAGGGAGGGAGGGAAGGGGGAGG
GAGTACAGGGGCGCAGGCGGTGGAGACGGAAAAGGTGGTGGAGGCCTTAG
GACTTTTGCACGGTGGGTGCAGTGGGCACGGGCATTGGGGCGGAAGGGAG
GTGGTGGGGAGGGTGGTTAGGAGAGCAAGGGAGGAGGTAGGGCGGGAGAG
GTGGGCGGAGGGAGTCAACCCCGAATACCACCAGGAGTTGTTGGGGATGC
TGGAAGAGCTGGCAAGGGAAGTGGAGGGGGAAAGGGGGGGGGAAGCAGGG
AGGGAAAGGGTGGAGTTGTAG
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protein sequence of NO03G00530.1

>NO03G00530.1-protein ID=NO03G00530.1-protein|Name=NO03G00530.1|organism=Nannochloropsis oceanica|type=polypeptide|length=504bp
MARSWPHQPCRPSCNTVLVVLSTLSSCSLLLLLLLLLPSPTSAATGENEE
KQICKEENVFHATNEWQPIPRDASVPPGLHVKLDLSTGERLGKLLDADET
AQAAATGAAGTAVSTSSTFIPLNQNKSQNGGGLLDSITIKNTPEEALDAA
SGPLPTRRETMLKVISNLPPVERASMGVDALLATRPPDLSHPEEEEVFWQ
KVEGLWEERQAMLQQAYDNMLKPAEELGRLIQVLREGAGEEGLLLQALIE
LEDWLSDVDMAQDFYTLGGWPLLGWVLEKGKEGEGDSALTLLVEILREAA
EGGVEGEEREHGEELLRKTVYALTSAARGNALVQSQLLKEGGLEVMGRLL
ASSPSSSSSSSGQRALRLKLVAFAHDMILEARQGQEARSDDADLVPGGVG
LAGGGGEGGREGGGSTGAQAVETEKVVEALGLLHGGCSGHGHWGGREVVG
RVVRRAREEVGRERWAEGVNPEYHQELLGMLEELAREVEGERGGEAGRER
VEL*
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Synonyms
Publications