Naga_100006g5, gene1118 (gene) Nannochloropsis gaditana

Overview
NameNaga_100006g5
Unique Namegene1118
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:1358533..1361930 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100006g5
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:1358533..1361930 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL053ngnoL053Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL050ngnoL050Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO03G00280NO03G00280Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna1161rna1161-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna1161rna1161Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna1161

>rna1161-protein ID=rna1161-protein|Name=rna1161|organism=Nannochloropsis gaditana|type=polypeptide|length=952bp
MVNMRSNEAKRSPRSNLRGIFNLGRDARISGLLALLTSSWFLDGVAFHSP
SFHSCSRGHARCFTTQPAKKVTMEMVTGHGSSSPIPPARAHPPKRLPGRR
PPPSTQHRNLHGGGGLWEINNEINFWSKQRNFDQVLALAQKVETEGLRPN
IYTFHALLNAAIACRRGEAETLAVWQKMTEEHGLRPTVVTYNILLKRFFG
RGTPAAQRQALAVLNEMRQGGVEPDVLTFNELINICVEGGDMKAAAGLMQ
AMVHRGMAPDTRTYTTLIKGHGLKGNLMDAFETVKTMRAQALPLSTYSCN
VLADACIRCGQPSRALALYREFEAEADEAGGEAGRTLDLKSFNIMIKAYR
GLGHVEGARAALHALERRGFKADTVTYNTLVDLHCKAQNLGGARSLIEKM
KENAVPVTHQTIHPLVQEEIIAHGVSWEEALDLATALLGAHGLKQNDVTI
CTVMEAMLSLERPRDAIQVFVRSFFAPREGVSPAEGGKGRERSERGKEAM
GRVPRPRVIPSLVAFNGLIKAYRDYVVGLDMEGEGGDMAPLPLLVFPPNG
GSPLWTQATTPRAVLEAAVHLPSYLQTLAAITPTATAPSPSSSSPHSRAP
GAARRSFGTSHLFGGPDSITYNILMDFAGELGDVEALETIHAARNAAGFA
IDHYVIHSYMKAHAVRGNLAGVTEAKEKMEALRVPANERTFSVLVLSLLR
CGQVEKAELLLKNALARQTYVHDSLFVAFIQHYTSAPSSSQQPSAPEKPT
SRLVAAREIFEAFKARRNPGAPMPAAPQQSHGKWAGAVWSAWMAALARKG
DLDGVLAAWKEMTLCPSLGVRPTRSTYAQVIRAACVAGEVETALQWVQNM
RGKKWVPDVRVYNGLIYACLEKEMGKADRKGSKGGGGQRLLVEVLEMMER
DGVQPNAITLRAKEGVMRVLASRMRAVSDTMVGKLKMLALSKQWAERTEG
KG
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Synonyms
Publications