Naga_100050g17, gene1003 (gene) Nannochloropsis gaditana

Overview
NameNaga_100050g17
Unique Namegene1003
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:1028109..1031294 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100050g17
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:1028109..1031294 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL053ngnoL053Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO03G01840NO03G01840Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna1041rna1041-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna1041rna1041Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna1041

>rna1041-protein ID=rna1041-protein|Name=rna1041|organism=Nannochloropsis gaditana|type=polypeptide|length=942bp
MMKTTAAPESTQCVAAAIVNVTSETSSKPSSETSLPPQPSLSSEAGIVAT
SKHMLRATPEERAVSYSCMQSSERIGGQVGSPASSGGLNLGKRRIAQSET
STFQSPRHLKHQVSSSSYLPQPRTARKNKSAQLLDFLRDGIKTQQHSCQA
LGMAREHAILVLQRWFRNLREHWRLVKQVQEATSQSLLPLLEAAEASRAG
SWASEWEAMCRQGSLEFHACHMLQGLGFAREGQAADKSLTHPMTLLSALL
ISVHPEAIMTASPVRSKRRRREHERRGIALVQAASRVHETLLALYHCLHQ
AKMPRWVMLRAVVQVRKAFRLYVVQRVRYQGVSDAEAARLVRRVTHAAVG
VFKAMHRSQQKSQVDAAQAIECAEAIIEGEARLRHLEAALQQLVGQRDTA
RRMDMARQVAEEGKQRDGKIHGRSELKPLASDQDETLMSMDSEPEGELHA
SGDTQTDTIFSNEWLVHEICVLPKSRFLQVSMEDASQPLTCGNKPSQGDT
QAYWETVTQTLLMGDFSPLLVLVQELADRLISMTPSRADLRDEILGSLDV
ALLKQVLSKDLLDSQLLFSILRFTGRRILCLEAPARNASTERWLVRLKEL
EDRVLQQAGGPCVRLSLQDSTVSKQWVPSISPLFEFLLEKVDQIHVDIFN
SHIRRATPHCRAHGPSFERSQFEERLAQGLTSVDRVLSWLRGVVASAWCQ
EQSMPVSSLRHGDQRVALLEGVRQQSGEAMRTLLRRAYASLLADSSRQGR
PVSVFSEDDLPETLAIDAQRLGLARHALWCVASAGTVVAYLGQALGRQLR
AEERQVVVQELMVLLPEADVEVEDIGLHVGHIASTRLGMTGAGERKMMEE
RVRRLLQEGRCPVFQLLYQRAVDVVHAVLEREESTTEDESGRVAHLCQQQ
GLTGMESRILKICDVMLLVTRHNEACFLSLYQKLVSDALRSE
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Synonyms
Publications