NO03G01840, NO03G01840 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO03G01840 vs. NCBI_GenBank
Match: EWM29640.1 (T-complex 11 [Nannochloropsis gaditana]) HSP 1 Score: 690.3 bits (1780), Expect = 9.700e-195 Identity = 427/960 (44.48%), Postives = 548/960 (57.08%), Query Frame = 0 Query: 86 TPISPRGLNLG-RGIDMATAEDLVRSQHRHHQVRSSSSRPFSSTHWIRQSTALPAPSLELLLGDRHHPCESTPQHSPLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAALTLQRWIRRILQHWRLVRQVQVVVGAHLLPLLEASDALGAGPWAWEWESLCDEGRGLVGHASDVLNGLEMNDMDASATEDRATHPETLLSALLIAAHPEVVTSSCSSKSKRRRLVYERKGWALAQGATRVHETLLALHHYLEQPGISRWIVSWGIRQVKHALRVFTWQREQCQGVAASETGSLAEELTKAVVDVLETVSRSKREMHLXXXXXXXXXXXPTKIVAICERAIREGVAKLGQLDEALQRLVGRPEAERRIEVAKQIVEQRLGLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPTESLYSNEWLVHEMCVLPHGRFLQVSLEANASTAAAKATAALSMPPTTSTCQTESQAGAEAYWASVTRTLLGGDYTPLLVLVQELAERLISTTPSRADLVEEVHGALDVALLGQVLSKDVLDSQLLFSMLRFAGERILWLEAPARNESTKNWLAQLNELEEQVKWQGGRGAVRLSLQGEGANTAWAPLVRPLFEFLLEKVDQIHVDIFNTHVRRATPHCRAHGPLFERQSFEKRLAQGATSLARARQWLGGVVNSGWTAEQTLRVHDRRYGDHRISLAEGLMQNREDALKEVVRRGFCSLLAEGEASRAMGGFDVGVGGGGLVLHEGVIPETLAMDAHRLDVARHALLCVARTATIVAYLGQAIRRNLGGEERVEVTQGLMVLLPEEAVTEVDIRLHVGHWAESKLGLIDRPARKLLEERVGRMLVEGKCPVLKLLYTRAVDVVHAELRREGRSMTAMRGEETREIKTQCLRQGLMGLEGWIVKVYDLLLLVSRHNEAAFLPLYRVLALEAM 1045 +P S GLNLG R I + +H HQV SSS P + TA S +LL D T QHS A L LQRW R + +HWRLV+QVQ LLPLLEA++A AG WA EWE++C +G L HA +L GL + A + THP TLLSALLI+ HPE + ++ +SKRRR +ER+G AL Q A+RVHETLLAL+H L Q + RW++ + QV+ A R++ QR + QGV+ +E L +T A V V + + RS+++ + C AI EG A+L L+ ALQ+LVG+ + RR+++A+Q+ E+ + T++++SNEWLVHE+CVLP RFLQVS+E S P T SQ +AYW +VT+TLL GD++PLLVLVQELA+RLIS TPSRADL +E+ G+LDVALL QVLSKD+LDSQLLFS+LRF G RIL LEAPARN ST+ WL +L ELE++V Q G VRLSLQ + W P + PLFEFLLEKVDQIHVDIFN+H+RRATPHCRAHGP FER FE+RLAQG TS+ R WL GVV S W EQ++ V R+GD R++L EG+ Q +A++ ++RR + SLLA+ G V E +PETLA+DA RL +ARHAL CVA T+VAYLGQA+ R L EER V Q LMVLLPE V DI LHVGH A ++LG+ RK++EERV R+L EG+CPV +LLY RAVDVVHA L RE + +E+ + C +QGL G+E I+K+ D++LLV+RHNEA FL LY+ L +A+ Sbjct: 81 SPASSGGLNLGKRRIAQSETSTFQSPRHLKHQVSSSSYLP-------QPRTARKNKSAQLL--DFLRDGIKTQQHS-------------------------CQALGMAREHAILVLQRWFRNLREHWRLVKQVQEATSQSLLPLLEAAEASRAGSWASEWEAMCRQG-SLEFHACHMLQGLGF-AREGQAADKSLTHPMTLLSALLISVHPEAIMTASPVRSKRRRREHERRGIALVQAASRVHETLLALYHCLHQAKMPRWVMLRAVVQVRKAFRLYVVQRVRYQGVSDAEAARLVRRVTHAAVGVFKAMHRSQQKSQVDAAQAIE-----------CAEAIIEGEARLRHLEAALQQLVGQRDTARRMDMARQVAEE--------------------------GKQRDGKIHGRSELKPLASDQDETLMSMDSEPEGELHASGDTQTDTIFSNEWLVHEICVLPKSRFLQVSME------------DASQPLTCG--NKPSQGDTQAYWETVTQTLLMGDFSPLLVLVQELADRLISMTPSRADLRDEILGSLDVALLKQVLSKDLLDSQLLFSILRFTGRRILCLEAPARNASTERWLVRLKELEDRVLQQAGGPCVRLSLQDSTVSKQWVPSISPLFEFLLEKVDQIHVDIFNSHIRRATPHCRAHGPSFERSQFEERLAQGLTSVDRVLSWLRGVVASAWCQEQSMPVSSLRHGDQRVALLEGVRQQSGEAMRTLLRRAYASLLADSSRQ----------GRPVSVFSEDDLPETLAIDAQRLGLARHALWCVASAGTVVAYLGQALGRQLRAEERQVVVQELMVLLPEADVEVEDIGLHVGHIASTRLGMTGAGERKMMEERVRRLLQEGRCPVFQLLYQRAVDVVHAVLERE----ESTTEDESGRVAHLCQQQGLTGMESRILKICDVMLLVTRHNEACFLSLYQKLVSDAL 939
BLAST of NO03G01840 vs. NCBI_GenBank
Match: CBN79311.1 (t-complex 11 (mouse) like 2, isoform CRA_a (Partial), partial [Ectocarpus siliculosus]) HSP 1 Score: 138.3 bits (347), Expect = 1.400e-28 Identity = 95/246 (38.62%), Postives = 125/246 (50.81%), Query Frame = 0 Query: 536 LYSNEWLVHEMCVLPHGRFLQVSLEANASTAAAKATAALSMPPTTSTCQTESQAGAEAYWASVTRTLLGGDYTPLLVLVQELAERLISTTPSRADLVEEVHGALDVALLGQVLSKDVLDSQLLFSMLRFAGERILWLEAPARNESTKNWLAQLNELEEQVKWQGGRGAVRLSLQGEGANTAWAPLVRPLFEFLLEKVDQIHVDIFNTHVRRATPHCRAHGPLFERQSFEKRLAQGATSLARARQWL 782 L S EWLV V+ G L VS+E A + S P + E G AYW++V + DYTPLL LV EL +++I TP R DL E A+DV LL Q++ D F M+ FAGER+L LEAP RN+ TK LA +++V +GGR + +VR FE+L K D+IHVDI N H++ TP + HG +ER F ++L G TSL WL Sbjct: 735 LLSKEWLVPG--VMISGETLTVSME-----EAIENQLLRSGNPAVAAGGGED--GVNAYWSTVESHVAAEDYTPLLGLVAELRDKIIGLTPRRRDLAAETCEAMDVELLEQMMDYGAFDVGCFFRMVAFAGERVLELEAPIRNDDTKATLAGWGRTQDEV--EGGRRRLE------------PAMVRECFEYLFSKTDEIHVDILNAHLQFVTPFLKQHGVEYERDRFTEKLDVGETSLDMTHLWL 957
BLAST of NO03G01840 vs. NCBI_GenBank
Match: CBN76843.1 (novel protein containing a T-complex protein 11 domain (zgc:73347) [Ectocarpus siliculosus]) HSP 1 Score: 113.6 bits (283), Expect = 3.700e-21 Identity = 88/295 (29.83%), Postives = 131/295 (44.41%), Query Frame = 0 Query: 606 DYTPLLVLVQELAERLISTTPSRADLVEEVHGALDVALLGQVLSKDVLDSQLLFSMLRFAGERILWLEAPARNESTKNWLAQLNELEEQVKWQGGRGAVRLSLQGEGANTAWAPLVRPLFEFLLEKVDQIHVDIFNTHVRRATPHCRAHGPLFERQSFEKRLAQGATSLARARQWLGGVVNS--GWTAEQTLRVHDRRYGDHRISLAEGLMQNREDALKEVVRRGFCSLLAEGEASRAMGGFDVGVGGGGLVLHEGVIPETLAMDAHRLDVARHALLCVARTATIVAYLGQAIRR 899 D+ PLL L+ E+ E L+S TP+ + LV EV L L ++L LD++ + ++ F RIL L+AP R++ + WL G A + G A PL+ +FEF+ ++++I D N H+R P+ HG +ER FE RL++G SL R + WL V G +G RE+ K V++ F LL ++ + D G GV+PETLA D RL AR + V AT+ + Q + R Sbjct: 488 DFGPLLALLGEVREELVSLTPNNSVLVGEVRAVLSQERLAEMLRDKTLDARQVQRLVGFIAGRILNLQAPVRSDGARAWLK-------------GFDASMEAAIASGDPLAIIPLLPRVFEFVFAQMEEIKRDTANAHIRLVAPYLARHGAPYERAKFEARLSRGDVSLERTKAWLSSAVQGFLGGDXXXXXXXXXXXXXXXXXXXXDG----REELHKAVLQEAFTGLL---RSTVRLDRPDAAAAAAG-----GVLPETLAGDGGRLAAARDDVDRVTLVATLCVLVRQVLAR 757
BLAST of NO03G01840 vs. NCBI_GenBank
Match: XP_005856379.1 (t-complex 11 like isoform cra b [Nannochloropsis gaditana CCMP526] >EKU19982.1 t-complex 11 like isoform cra b [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 98.2 bits (243), Expect = 1.600e-16 Identity = 64/230 (27.83%), Postives = 110/230 (47.83%), Query Frame = 0 Query: 606 DYTPLLVLVQELAERLISTTPSRADLVEEVHGALDVALLGQVLSKDVLDSQLLFSMLRFAGERILWLEAPARNESTKNWLAQLNELEEQVKWQGGRGAVRLSLQGEGANTAWAPLVRPLFEFLLEKVDQIHVDIFNTHVRRATPHCRAHGPLFERQSFEKRLAQGATSLARARQWLGGVVNSGWTAEQTLRVHDRRYGDHRISLAEGLMQNREDALKEVVRRGFCSLLAE 836 +Y P L LV E+ E+L S TP R DL EE+ LD LL Q+ + +LD+ ++ +L++ + ++ L+AP R T +W ++ E++V ++ S + +A+ L+ +F + ++D+ DI + H++ P+ HG +ER+ F R G L WL V+ S A + HR L+ + + L++ VR CS L E Sbjct: 559 EYEPFLALVDEVREKLTSLTPRRIDLAEELRAHLDKKLLSQMALQGLLDAPAIYKLLKYIFDHLMALQAPVRVAETMSW---ISGFEKEV-----HASMSASQHAKYIPSAFVALLPRVFRGIFARIDETQRDIADAHIQMLRPYLVQHGVEYEREKFAARFLTGQWRLLNTEAWLKKVLASPENASHLSSIAQGDAMAHRNLLSRAM----KCLLQQPVRIEICSNLPE 776
BLAST of NO03G01840 vs. NCBI_GenBank
Match: EWM25426.1 (T-complex 11 [Nannochloropsis gaditana]) HSP 1 Score: 98.2 bits (243), Expect = 1.600e-16 Identity = 64/230 (27.83%), Postives = 110/230 (47.83%), Query Frame = 0 Query: 606 DYTPLLVLVQELAERLISTTPSRADLVEEVHGALDVALLGQVLSKDVLDSQLLFSMLRFAGERILWLEAPARNESTKNWLAQLNELEEQVKWQGGRGAVRLSLQGEGANTAWAPLVRPLFEFLLEKVDQIHVDIFNTHVRRATPHCRAHGPLFERQSFEKRLAQGATSLARARQWLGGVVNSGWTAEQTLRVHDRRYGDHRISLAEGLMQNREDALKEVVRRGFCSLLAE 836 +Y P L LV E+ E+L S TP R DL EE+ LD LL Q+ + +LD+ ++ +L++ + ++ L+AP R T +W ++ E++V ++ S + +A+ L+ +F + ++D+ DI + H++ P+ HG +ER+ F R G L WL V+ S A + HR L+ + + L++ VR CS L E Sbjct: 559 EYEPFLALVDEVREKLTSLTPRRIDLAEELRAHLDKKLLSQMALQGLLDAPAIYKLLKYIFDHLMALQAPVRVAETMSW---ISGFEKEV-----HASMSASQHAKYIPSAFVALLPRVFRGIFARIDETQRDIADAHIQMLRPYLVQHGVEYEREKFAARFLTGQWRLLNTEAWLKKVLASPENASHLSSIAQGDAMAHRNLLSRAM----KCLLQQPVRIEICSNLPE 776
BLAST of NO03G01840 vs. NCBI_GenBank
Match: GBG33876.1 (Hypothetical Protein FCC1311_100992 [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 81.3 bits (199), Expect = 2.100e-11 Identity = 61/206 (29.61%), Postives = 95/206 (46.12%), Query Frame = 0 Query: 584 QTESQAGAEAYWASVTRTLLGGDYTPLLVLVQELAERLISTTPSRADLVEEVHGALDVALLGQVLSKDVLDSQLLFSMLRFAGERILWLEAPARNESTKNWL-AQLNELEEQVKWQGGRGAVRLSLQGEGANTAWAPLVRPLFEFLLEKVDQIHVDIFNTHVRRATPHCRAHGPLFERQSFEKRLAQGATSLARARQWLGGVVNSG 789 Q +A W + + D+ L L+ EL + + S TP+R DL ++ ALD+ LLGQ+L + S L + F + I LEAPAR+E T WL + L +L+ K ++ L E F+F EK++Q+ +D+ N +R+ +P G R F+KR+ G SL R ++ SG Sbjct: 127 QVVMDTAKDAMWRLIEEDMARKDFRRLFALIDELKQVMASITPNRKDLHAQLDAALDLDLLGQMLEHNSAASWDLRPLTEFVVKYIRMLEAPARSEHTDAWLKSYLAKLDAADKDHHDELHHKVHLLHE------------FFDFCHEKLEQVRLDMTNAFLRQISPVVSEEGADMIRAEFQKRVDAGEVSLEYTRAFVAKAFPSG 320
BLAST of NO03G01840 vs. NCBI_GenBank
Match: GBG24792.1 (Hypothetical Protein FCC1311_010102 [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 79.3 bits (194), Expect = 7.800e-11 Identity = 47/159 (29.56%), Postives = 80/159 (50.31%), Query Frame = 0 Query: 613 LVQELAERLISTTPSRADLVEEVHGALDVALLGQVLSKDVLDSQLLFSMLRFAGERILWLEAPARNESTKNWLAQLNELEEQVKWQGGRGAVRLSLQGEGANTAWAPLVRPLFEFLLEKVDQIHVDIFNTHVRRATPH-CRAHGPLFERQSFEKRLAQG 771 +V E+ RL + TP+RADL+ ++ LD LL Q + ++ + L+S+++F GER+L L+AP R E T++WL L+ + + +W L F+F+L ++ I D+ N H++ + G + R+ F RL QG Sbjct: 581 IVAEVCSRLAALTPNRADLIRQLEERLDTELLAQQVRENAFNQADLYSLVQFIGERLLALQAPIRQERTESWLMDLH------------------VAAQERRKSWQDLAPRAFDFVLRELAAIETDMANFHLKVLRDNVSHDQGAAYLREHFIGRLRQG 721
BLAST of NO03G01840 vs. NCBI_GenBank
Match: XP_008617091.1 (hypothetical protein SDRG_12789 [Saprolegnia diclina VS20] >EQC29539.1 hypothetical protein SDRG_12789 [Saprolegnia diclina VS20]) HSP 1 Score: 73.2 bits (178), Expect = 5.600e-9 Identity = 107/465 (23.01%), Postives = 171/465 (36.77%), Query Frame = 0 Query: 585 TESQAGAEAYWASVTRTLLGGDYTPLLVLVQELAERLISTTPSRADLVEEVHGALDVALLGQVLSKDVLD--SQLLFSMLRFAGERILWLEAPARNESTKNWLAQLNELEEQVKWQGGRGAVRLSLQGEGANTAWAPLVRPLFEFLLEKVDQIHVDIFNTHVRRATPHCRAHGPLFERQSFEKRLAQGATSLARARQWLGGVVNSGWTAEQTLRVHDRRYGDHRISLAEGLMQNREDALKEVVRRGFCSLLAEGEASRAMGGFDVGVGGGGLVLHEGVIPETLAMDAHRLDVARHALLCVARTATIVAYLGQAIRRN---LGGEERVEVTQGLMVLLPEEAVTEVDIRLHVGHWAESKLGLIDRPARKLLEERVGRMLVEGKCPVLKLLYTRAVDVVHAELRREGRSMTAMRGEETREIKTQCLRQGLMGLEGWIVKVYDLLLLVSRHNEAAFLPLYRVLALEAM 1045 T +Q +A+W + T D ++ +L ++L + +A + AL A L + S D + +L MLR IL EAPAR ST WL + S + + AW + +F KVD+I +D N H++ P+ HG E++ F +L QGAT+LA QWL TA TLR DAL RR + SL+ + G V + PETL +D R+ R+ + + A +V + A+ + ++ + +L + D+ +H A LG + ER +++ V KL + R + + L +T E++ L L L + + ++RHNEA Y L EA+ Sbjct: 455 TVAQTMRQAFWDQLAAT---RDRARIVGSFVDLRDQLTAVLKHKA-----LATALPTAHLEALASSSSWDEWATVLQQMLR----AILHGEAPARTSSTHAWLNR-------------------SQETPASEAAWVEALVRFLQFGFAKVDEIQIDSMNAHLKLLAPYVARHGVEHEQKKFALKLEQGATTLAATSQWL---TRQLATAAPTLR----------------------DALTAGDRRAYRSLVQDAFVGLVTSGMAV----------DTPWPETLELDKDRVRDLRNQMDVLTMQACLVTLIQGALAPHHVAYAPKDAAAFCDQIRILAHADETRLPDLAVHASAVAARVLGAKGQALDTAALERRAEHMLDPANAVYKLFFQRVTQALTSFL-------------QTNEME---LHPTLSVLAPHVTTMVQAAAKLARHNEAVHCHYYNRLIREAL 837
BLAST of NO03G01840 vs. NCBI_GenBank
Match: OQR84509.1 (hypothetical protein ACHHYP_13293 [Achlya hypogyna]) HSP 1 Score: 72.8 bits (177), Expect = 7.300e-9 Identity = 91/377 (24.14%), Postives = 136/377 (36.07%), Query Frame = 0 Query: 669 ILWLEAPARNESTKNWLAQLNELEEQVKWQGGRGAVRLSLQGEGANTAWAPLVRPLFEFLLEKVDQIHVDIFNTHVRRATPHCRAHGPLFERQSFEKRLAQGATSLARARQWLGGVVNSGWTAEQTLRVHDRRYGDHRISLAEGLMQNREDALKEVVRRGFCSLLAEGEASRAMGGFDVGVGGGGLVLHEGVIPETLAMDAHRLDVARHALLCVARTATIVAYL-GQAIRRNLGGEERVEVTQGLMVLLPEEAVTEVDIRLHVGHWAESKLGLIDRPARKLLEERVGRMLVEGKCPVLKLLYTRAVDVVHAELRREGRSMTAMRGEETREIKTQCLRQGLMGLEGWIVKVYDLLLLVSRHNEAAFLPLYRVLALEAM 1045 IL EAPARN+ST LA + + A + EF KVD+IH+D N H++ P+ HG E++ F +L G +LA QWL V + T L L A + V+ F +L++E A +M PET A+D R+ R+ + +A A+++ L G R + + +L D+ +H A + +DR A + RV L + V L + R + + LR A+ T E+ LR L L K ++RHNEA + Y L EAM Sbjct: 523 ILAGEAPARNDSTTAHLATV-----------------AGIAPPSTEAAIVDALVNFLEFAFAKVDEIHIDSMNAHLKALGPYVARHGVEHEQKKFALKLESGIVTLAHTEQWLRSHVAAAPT-----------------PLRSELAAGNRAAFRTVLHTAFVALVSEHVAGDSMW------------------PETFALDKDRVRGLRNQVDLLAMQASLITILQGSVAPRRYSAADAAAFCSQIAILTEASDTRVGDLAVHTAAEAARLVPSVDRAA---VMRRVEHTL-DPSDAVFALFFKRVLQTLSTYLR-----SNALEIHPTLEV----LRAQLTALVQTAAK-------LARHNEAVHVHYYNRLIREAM 827
BLAST of NO03G01840 vs. NCBI_GenBank
Match: OON09308.1 (hypothetical protein BSLG_01619 [Batrachochytrium salamandrivorans]) HSP 1 Score: 67.4 bits (163), Expect = 3.100e-7 Identity = 82/367 (22.34%), Postives = 148/367 (40.33%), Query Frame = 0 Query: 592 EAYWASVTRTLLGGDY-TPLLVLVQELAERLISTTPSRADLVEEVHGALDVALLGQVLSKDVLDSQLLFSMLRFAGERILWLEAPARNESTKNWLAQLNELEEQVKWQGGRGAVRLSLQGEGANTAWAPLVRPLFEFLLEKVDQIHVDIFNTHVRRATPHCRAHGPLFERQSFEKRLAQGATSLARARQWLGGVVNSGWTAEQTLRVHDRRYGDHRISLAEGLMQNREDALKEVVRRGFCSLLAEGEASRAMGGFDVGVGGGGLVLHEGVIPETLAMDAHRLDVARHALLCVARTATIVAYLGQAIRRNLGGEERVEVTQGLMVLLPEEAVTEVDIRLHVGHWAESKLGLIDRPARKLLEERVGRML 958 +A++ +V + + G+Y +++L++E+ + L+ + + E++ LD L+ Q ++ V D L + +AGE++L L AP R+ S ++ L + AN +L+ + ++ +D+ N ++ PH + +ER F+ L G+ SL R R WL TA +R + + RI+ E ++ +DAL E V + + G + + + ETL MDA R+ ++ V A +V G + + G + GL LL E V D + H + LI A LE+R +L Sbjct: 561 QAFFDNVGQEIAAGNYANHVVLLLKEIKQGLLDMVSTDGKIATEINSVLDFDLIHQQITHGVFD---LHKTMHYAGEKMLQLCAPMRDASIRH----------------------LDASTDMANA---------LSMMLDILSEMKLDLSNYRLQALKPHLQRQSVDYERSKFDNALRDGSVSLERTRAWLS-------TAVAGIRAINNQRNPERINHPENSVK-FQDALHEGV---------------------LNLVFGNVAVDPATMAETLVMDAARIYAFQNQAQAVTVIAALVMLTGNIVPQLRSGFD----DHGLAELLSELKVLLADKETCLDH----LVTLIVTKANASLEKRQSVLL 856 The following BLAST results are available for this feature:
BLAST of NO03G01840 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 10
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO03G01840 ID=NO03G01840|Name=NO03G01840|organism=Nannochloropsis oceanica|type=gene|length=3912bpback to top protein sequence of NO03G01840.1 >NO03G01840.1-protein ID=NO03G01840.1-protein|Name=NO03G01840.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1067bpback to top Synonyms
Publications
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