NO30G00960, NO30G00960 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO30G00960 vs. NCBI_GenBank
Match: CBJ32684.1 (Cysteinyl-tRNA Synthetase [Ectocarpus siliculosus]) HSP 1 Score: 406.8 bits (1044), Expect = 9.500e-110 Identity = 222/459 (48.37%), Postives = 277/459 (60.35%), Query Frame = 0 Query: 27 MSASQGALAASAGPSDKRQEHDFALWKRTKDEALEPSWSSPWGRGRPGWHIECSVMASDTFQELSGGRMDIHSGGIDLRFPHHENEVAQAEACLGCHQWVNYWMHAGHLHIKGFKMSKSLKNFITIQEALQTHTARQIRFCFLLSRYNAPMDYGDGTMSNAAALESYFAEFFHNIKAFLRKAGVSQTQHMGVKEKELFHRLQEAKLEIRAAFADDFDIPLALSKLQELVRATNRYLEDPSPA-----SLLVRAVAEYTTWVFKCLGLASGSEGELGFSSPLRGGIG---EGGGXXGGREEVMAPVLDVVASFRDALRAAAIEKDAGKVLELCDSLRDSLLPPLGVRLEDKDGGSIWKLVDPSVLMKEKAQXXXXXXXXXXXXXXXXXXXXXXXXXAQIPPSVYFQRTQGDK----FSGYDPEGFPTHDKEGNPLSKGVLKKLGKEWEGHKKAYAKAVGK 474 M+ +GAL+ AG DKR DFALWKR+++ EPSW SPWG GRPGWHIECSVMAS TF+ + G MDIHSGG+DL+FPHH+NE+AQAEA C QWVNY++H GHLHIKGFKMSKSLKNFITI++ALQ ++ RQIR FLL +YN PMDYGD MS A A E F+EFFHN+KA LR+ E L L +AK E++ DD D P A+ LQELV+ N+Y+E A + VR AEY T +FK GLAS LGFS G+G G G RE ++ PVLDV++ FRD +R D VL CD +R+ LLP +GVRLEDK ++WKL DP+VL +E+ Q +IP S YF+ +G+ ++ +D G PTHD G P+ K KK+ KEWE K Y A+ K Sbjct: 209 MAEGEGALSLGAG--DKRSSGDFALWKRSREG--EPSWPSPWGDGRPGWHIECSVMASATFEGMGDGTMDIHSGGVDLKFPHHDNEMAQAEAKYDCCQWVNYFLHTGHLHIKGFKMSKSLKNFITIKQALQENSPRQIRLLFLLHKYNTPMDYGDDAMSGALAAERTFSEFFHNVKAALRRTTARDPARTKEPELALMSSLSDAKKEVKKCLCDDVDTPGAMGALQELVKNVNKYIEAKERAGEPIVADCVRGAAEYVTKIFKVFGLASPGPA-LGFSQVGDAGVGGDASGEGGEASREAILGPVLDVLSEFRDKVRGCGRAGDTKGVLAACDHVREELLPGVGVRLEDKGDQAVWKLEDPAVLARERQQREQEQLRRLEAKAETKRKAAEKEARKKIPASEYFRGLKGEDGKALYTQFDDNGVPTHDAAGEPIVKD--KKVKKEWEAQNKLYNNALAK 660
BLAST of NO30G00960 vs. NCBI_GenBank
Match: OQR80790.1 (cysteinyl-tRNA synthetase [Achlya hypogyna]) HSP 1 Score: 401.7 bits (1031), Expect = 3.100e-108 Identity = 244/452 (53.98%), Postives = 308/452 (68.14%), Query Frame = 0 Query: 30 SQGALAASAGPSDKRQEHDFALWKRTKDEALEPSWSSPWGRGRPGWHIECSVMASDTFQELSGGRMDIHSGGIDLRFPHHENEVAQAEACLGCHQWVNYWMHAGHLHIKGFKMSKSLKNFITIQEALQTHTARQIRFCFLLSRYNAPMDYGDGTMSNAAALESYFAEFFHNIKAFLRKAGVSQTQHMGVKEKELFHRLQEAKLEIRAAFADDFDIPLALSKLQELVRATNRYLEDPSP-ASLLVRAVAEYTTWVFKCLGLASGSEGELGFSSPLRGGIGEGGGXXGGREEVMAPVLDVVASFRDALRAAAIEKD-----AGKVLELCDSLRDSLLPPLGVRLEDKDG-GSIWKLVDPSVLMKE----KAQXXXXXXXXXXXXXXXXXXXXXXXXXAQIPPSVYFQRTQGDKFSGY-DPEGFPTHDKEGNPLSKGVLKKLGKEWEGHKKAYAK 470 ++G A S G SDKR +DFALWK++K EP WSSPWG GRPGWHIECS MASD ++L GGR+DIH+GGIDLRFPHH+NE+AQ+EA QW+NY++H GHL+I+G KMSKSLKNF+ I EAL ++ RQ+RF FLL +YN PMDY D TM A ++++FA FF N+K LR+ GV QTQ G EK+L R E K ++ A ADD + PLAL LQEL + NRYL P S+ +RA AEY T + + GL + ++GF PL G G +E ++ PVLD+ A FRD +RAAA+ KD A ++ELCDS+RD+ LP GVRLED+ G S+WKL + L++E + XXXXXXXXXXXXXXXXXXXXXXXXXAQI P F + Q DK+S + D +G PTH +G P+SKG+LKKL KE + KK Y K Sbjct: 231 AEGEGALSVGASDKRNANDFALWKKSKKG--EPFWSSPWGEGRPGWHIECSAMASDALKDLEGGRIDIHTGGIDLRFPHHDNEIAQSEAYFNFEQWINYFVHTGHLNIEGLKMSKSLKNFVKINEALALNSPRQLRFLFLLHKYNVPMDYNDNTMDEAVVVDTFFANFFQNVKVALREIGVEQTQKWGPAEKKLGQRTLETKEKVHQALADDLNTPLALQLLQELAKDVNRYLAAGVPHVSMCIRAAAEYITHILRVFGLIPDAT-DIGF--PL--------GASGDQETILTPVLDIFAEFRDQVRAAALSKDPSQNLAKTLMELCDSVRDTKLPYAGVRLEDRAGSSSVWKLGNKDELLEEIRVKEXXXXXXXXXXXXXXXXXXXXXXXXXXXAQIHPKDLF-KLQTDKYSAFNDADGLPTHTVDGEPVSKGLLKKLAKEQDKQKKLYDK 668
BLAST of NO30G00960 vs. NCBI_GenBank
Match: XP_012208864.1 (cysteinyl-tRNA synthetase [Saprolegnia parasitica CBS 223.65] >KDO20407.1 cysteinyl-tRNA synthetase [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 395.2 bits (1014), Expect = 2.900e-106 Identity = 239/450 (53.11%), Postives = 305/450 (67.78%), Query Frame = 0 Query: 30 SQGALAASAGPSDKRQEHDFALWKRTKDEALEPSWSSPWGRGRPGWHIECSVMASDTFQELSGGRMDIHSGGIDLRFPHHENEVAQAEACLGCHQWVNYWMHAGHLHIKGFKMSKSLKNFITIQEALQTHTARQIRFCFLLSRYNAPMDYGDGTMSNAAALESYFAEFFHNIKAFLRKAGVSQTQHMGVKEKELFHRLQEAKLEIRAAFADDFDIPLALSKLQELVRATNRYLEDPSP-ASLLVRAVAEYTTWVFKCLGLASGSEGELGFSSPLRGGIGEGGGXXGGREEVMAPVLDVVASFRDALRAAAIEKD---AGKVLELCDSLRDSLLPPLGVRLEDK-DGGSIWKLVDPSVLMKE----KAQXXXXXXXXXXXXXXXXXXXXXXXXXAQIPPSVYFQRTQGDKFSGY-DPEGFPTHDKEGNPLSKGVLKKLGKEWEGHKKAYAK 470 ++G A S G SDKR +DFALWK++K EP W+SPWG GRPGWHIECS MASD ++L+GGR+DIH+GGIDLRFPHH+NE+AQ+EA QW+NY++H GHL+I+G KMSKSLKNF+ I EAL ++ RQ+RF FLL +YN PMDY D TM A ++S+FA FF N+K LR+ V QTQ GV EK+L R E K ++ AA ADD + PLAL LQEL + NRYL P S+ +RA AEY T + + GL + ++GF PL G G +E ++ PVLD+ A FRD +R AA+ KD A ++ELCDS+RD+ LP GVRLED+ + S+WKL + L++E XXXXXXXXXXXXXXXXXXXXXXXX A + P F + Q DK+S + + +G PTH +G P+SKG LKKL KE E KK + K Sbjct: 237 AEGEGALSVGASDKRNANDFALWKKSKKG--EPFWASPWGEGRPGWHIECSAMASDALKDLAGGRIDIHTGGIDLRFPHHDNEIAQSEAYFNFEQWINYFVHTGHLNIEGLKMSKSLKNFVKINEALAMNSPRQLRFLFLLHKYNVPMDYNDNTMDEAVGVDSFFANFFQNVKVALREINVDQTQKWGVHEKKLGARTLEIKEKVHAALADDLNTPLALQLLQELAKEVNRYLALNIPHVSMCLRAAAEYITHMLRVFGLIPDAT-DIGF--PL--------GASGDQETILTPVLDIFAEFRDQVRTAALSKDPNLAKLIMELCDSVRDAKLPHAGVRLEDRANASSVWKLANKDELLEEIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAGVHPKDMF-KLQKDKYSAFNEADGLPTHTVDGEPISKGALKKLAKEQEKQKKLFDK 672
BLAST of NO30G00960 vs. NCBI_GenBank
Match: XP_008618159.1 (cysteinyl-tRNA synthetase [Saprolegnia diclina VS20] >EQC28511.1 cysteinyl-tRNA synthetase [Saprolegnia diclina VS20]) HSP 1 Score: 393.3 bits (1009), Expect = 1.100e-105 Identity = 239/449 (53.23%), Postives = 304/449 (67.71%), Query Frame = 0 Query: 30 SQGALAASAGPSDKRQEHDFALWKRTKDEALEPSWSSPWGRGRPGWHIECSVMASDTFQELSGGRMDIHSGGIDLRFPHHENEVAQAEACLGCHQWVNYWMHAGHLHIKGFKMSKSLKNFITIQEALQTHTARQIRFCFLLSRYNAPMDYGDGTMSNAAALESYFAEFFHNIKAFLRKAGVSQTQHMGVKEKELFHRLQEAKLEIRAAFADDFDIPLALSKLQELVRATNRYLEDPSP-ASLLVRAVAEYTTWVFKCLGLASGSEGELGFSSPLRGGIGEGGGXXGGREEVMAPVLDVVASFRDALRAAAIEKD---AGKVLELCDSLRDSLLPPLGVRLEDK-DGGSIWKLVDPSVLMKEKAQXXXXXXXXXXXXXXXXXXXXXXXXXAQIPPSVY---FQRTQGDKFSGY-DPEGFPTHDKEGNPLSKGVLKKLGKEWEGHKKAYAK 470 ++G A S G SDKR +DFALWK++K EP W+SPWG GRPGWHIECS MASD ++L+GGR+DIH+GGIDLRFPHH+NE+AQ+EA QW+NY++H GHL+I+G KMSKSLKNF+ I EAL ++ RQ+RF FLL +YN PMDY D TM A ++S+F FF N+K LR+ V QTQ GV EK+L R E K ++ AA ADD + PLAL LQEL + NRYL P S+ +RA AEY T + + GL + ++GF PL G G +E ++ PVLD+ A FRD +RAAA+ KD A V+ELCDS+RD+ LP GVRLED+ + S+WKL + L++E XXXXXXXXXXXXXXXXXXXXXXXXX V+ + Q +K+S + + +G PTH +G P+SKG LKKL KE E KK Y K Sbjct: 237 AEGEGALSVGASDKRNANDFALWKKSKKG--EPFWASPWGEGRPGWHIECSAMASDALKDLAGGRIDIHTGGIDLRFPHHDNEIAQSEAYFNFEQWINYFIHTGHLNIEGLKMSKSLKNFVKINEALTMNSPRQLRFLFLLHKYNVPMDYNDNTMDEAVGVDSFFTNFFQNVKVALREINVDQTQKWGVHEKKLGARTLEIKEKVHAALADDLNTPLALQLLQELAKEVNRYLALNIPHVSMCLRAAAEYITHMLRVFGLIPDAM-DVGF--PL--------GASGDQETILTPVLDIFAEFRDQVRAAALSKDPNLAKLVMELCDSVRDAKLPHAGVRLEDRANASSVWKLANKDELLEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVHPKDMFKLQKNKYSAFNEADGLPTHTVDGEPVSKGALKKLAKEQEKQKKLYDK 672
BLAST of NO30G00960 vs. NCBI_GenBank
Match: XP_008876440.1 (cysteine-tRNA ligase [Aphanomyces invadans] >ETV94849.1 cysteine-tRNA ligase [Aphanomyces invadans]) HSP 1 Score: 393.3 bits (1009), Expect = 1.100e-105 Identity = 234/471 (49.68%), Postives = 304/471 (64.54%), Query Frame = 0 Query: 16 ATGSTPQKIITMSASQGALAA------SAGPSDKRQEHDFALWKRTKDEALEPSWSSPWGRGRPGWHIECSVMASDTFQELSGGRMDIHSGGIDLRFPHHENEVAQAEACLGCHQWVNYWMHAGHLHIKGFKMSKSLKNFITIQEALQTHTARQIRFCFLLSRYNAPMDYGDGTMSNAAALESYFAEFFHNIKAFLRKAGVSQTQHMGVKEKELFHRLQEAKLEIRAAFADDFDIPLALSKLQELVRATNRYL-EDPSPASLLVRAVAEYTTWVFKCLGLASGSEGELGFSSPLRGGIGEGGGXXGGREEVMAPVLDVVASFRDALRAAAIEKDAG-----KVLELCDSLRDSLLPPLGVRLEDKDGG-SIWKLVDPSVLMKE----KAQXXXXXXXXXXXXXXXXXXXXXXXXXAQIPPSVYFQRTQGDKFSGYDPEGFPTHDKEGNPLSKGVLKKLGKEWEGHKKAYAK 470 A G K++ + Q L A S G SDKR +DFALWK++K EP W SPWG GRPGWHIECS MASD + L GGR+DIH+GG+DLRFPHH+NE+AQ+EA QW+NY++H GHL+I+G KMSKSLKNF+ I +AL +T RQ+RF FLL +YN PMDY D TM A ++++F++FF N+KA LR+ G+ Q+Q EK L + + K ++ A ADD D PLAL LQEL + NRY+ PSP S+ +R+ AEY T + + GL S G++GF PL G GG+EE +APVLD+ FRD +RA D ++ LCDS+RDS LP GVRLED+ GG S+WKL D L+ E + + XXXXXXXXXXXXXXXXXXXXXX AQI P+ F+ ++S ++ +G PT G P++K +LKKL KE + H+K Y K Sbjct: 217 AKGKNYGKLVPENVGQSELLAEGEGSLSVGASDKRNGNDFALWKKSKRG--EPFWMSPWGEGRPGWHIECSAMASDALKHLEGGRIDIHTGGVDLRFPHHDNEIAQSEAYFDFEQWINYFIHTGHLNIEGLKMSKSLKNFVKINQALVHNTPRQLRFLFLLHKYNVPMDYNDNTMDEAVGVDAFFSKFFQNVKATLRETGIEQSQKWTAAEKALGKAVLDTKEKVHQALADDLDTPLALRLLQELAKDVNRYVASSPSPVSMAIRSAAEYITCMLRIFGLIPNSSGDIGF--PLEGA-------AGGQEETLAPVLDIFTEFRDEVRAVLFNSDPSVDLKKTLMALCDSVRDSKLPHAGVRLEDRSGGKSVWKLADKDELLAEIKAKEDEKXXXXXXXXXXXXXXXXXXXXXXERAQIHPTDLFK--SSPEYSAFNEQGLPTLLASGEPVAKSLLKKLAKEQDKHQKLYDK 674
BLAST of NO30G00960 vs. NCBI_GenBank
Match: XP_002178673.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC50338.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 390.6 bits (1002), Expect = 7.000e-105 Identity = 238/435 (54.71%), Postives = 296/435 (68.05%), Query Frame = 0 Query: 41 SDKRQEHDFALWKRTKDEALEPSWSSPWGRGRPGWHIECSVMASDTFQE-LSGGRMDIHSGGIDLRFPHHENEVAQAEACLGCHQWVNYWMHAGHLHIKGFKMSKSLKNFITIQEALQTHTARQIRFCFLLSRYNAPMDYGDGTMSNAAALESYFAEFFHNIKAFLRKAGVSQTQHMGVKEKELFHRLQEAKLEIRAAFADDFDIPLALSKLQELVRATNRYLEDPSPASLLVRAVAEYTTWVFKCLGLASGSEGELGFSSPLRGGIGEGGGXXGGREEVMAPVLDVVASFRDALRAAAIEKDAGKVLELCDSLRDSLLPPLGVRLEDKDGGSIWKLVDPSVLMKEKAQXXXXXXXXXXXXXXXXXXXXXXXXXAQIPPSVYF-QRTQGDK----FSGYDPEGFPTHDKEGNPLSKGVLKKLGKEWEGHKKAYAK 470 +DK+ DFALWK+TK EPSW SPWG GRPGWHIECSVMASD L RMD+HSGG+DL+FPHH+NE+AQAEA G QWVNY++HAGHLHIKG KMSKSLKNFITIQ+AL+ ++ARQIR FLL +YNA MDYGD TM++A E F EFFHN+KA LR+ + +Q L L AK ++ A DDFD P A+S L +LVRATN Y+E + +L+VR VA Y T +F+ GL GSE ++GF++ E GG REE + PVLD + +FR A+R A +D G VL+LCD+ RD LP LG+RLEDK GS+WKL DP+ L++E Q XXXXXXXXXXXXXXXXXXXXXXX ++PP Y Q T D +S +D +G PTHD G P++K KK+ K ++ + Y K Sbjct: 217 TDKQSPRDFALWKKTKPG--EPSWDSPWGPGRPGWHIECSVMASDVLDRLLQHRRMDLHSGGVDLKFPHHDNEMAQAEAECGETQWVNYFVHAGHLHIKGLKMSKSLKNFITIQQALEINSARQIRMLFLLHKYNAQMDYGDNTMTHAMETEKRFVEFFHNVKACLRQHRMDDSQKWDATTIRLQQTLAAAKTKVHDALRDDFDTPTAMSVLVDLVRATNIYVEGDTVVNLVVRNVASYVTDIFRTFGLV-GSE-DVGFAT-------ESGG--ASREETLGPVLDALMNFRAAVRDKARSQDVGGVLDLCDAFRDLHLPNLGIRLEDKADGSVWKLADPAELLREMEQKEXXXXXXXXXXXXXXXXXXXXXXXXRLPPVEYMRQLTLEDNVTLMYSQFDEDGIPTHDATGEPVNKNQGKKVQKLFKAQQGKYDK 638
BLAST of NO30G00960 vs. NCBI_GenBank
Match: OQS07014.1 (cysteinyl-tRNA synthetase [Thraustotheca clavata]) HSP 1 Score: 387.9 bits (995), Expect = 4.600e-104 Identity = 234/446 (52.47%), Postives = 298/446 (66.82%), Query Frame = 0 Query: 30 SQGALAASAGPSDKRQEHDFALWKRTKDEALEPSWSSPWGRGRPGWHIECSVMASDTFQELSGGRMDIHSGGIDLRFPHHENEVAQAEACLGCHQWVNYWMHAGHLHIKGFKMSKSLKNFITIQEALQTHTARQIRFCFLLSRYNAPMDYGDGTMSNAAALESYFAEFFHNIKAFLRKAGVSQTQHMGVKEKELFHRLQEAKLEIRAAFADDFDIPLALSKLQELVRATNRYLEDPSP-ASLLVRAVAEYTTWVFKCLGLASGSEGELGFSSPLRGGIGEGGGXXGGREEVMAPVLDVVASFRDALRAAAIEKD---AGKVLELCDSLRDSLLPPLGVRLEDK-DGGSIWKLVDPSVLMKEKAQXXXXXXXXXXXXXXXXXXXXXXXXXAQIPPSVYFQ---RTQGDKFSGYDPEGFPTHDKEGNPLSKGVLKKLGKEWEGHKKAY 468 ++G A S G +DKR +DFALWK++K EP W SPWG GRPGWHIECS MASD ++L GGR+DIH+GGIDLRFPHH+NE+AQ+EA QW+NY++H GHL+I+G KMSKSLKNF+ I EAL +T RQ+RF FLL +YN PMDY D TM A ++S+FA FF N+K LR+ GV QTQ G+ EK+L R E K ++ A ADD + PLA+ LQEL + NRYL P S+ +RA AEY T + + GL + ++GF PL G G +E ++ PVLD+ A FRD +R AA+ KD A ++ELCDS+RD+ LP GVRLED+ + S+WKL + L++E XXXXXXXXXXXXXXXXXXXXXXXXX + + Q DK+S ++ EG PT G +SKG+LKKL KE E KK Y Sbjct: 236 AEGEGALSVGATDKRNANDFALWKKSKKG--EPYWKSPWGEGRPGWHIECSAMASDALKDLEGGRIDIHTGGIDLRFPHHDNEIAQSEAYFNFEQWINYFIHTGHLNIEGLKMSKSLKNFVKINEALALNTPRQLRFLFLLHKYNVPMDYNDNTMDEAVVVDSFFANFFQNVKVALREIGVEQTQKWGLNEKKLGERTLETKEKVHQALADDLNTPLAIQLLQELAKDVNRYLALNIPHVSMCLRAAAEYITHMLRVFGLIPDAT-DIGF--PL--------GASGDQETILTPVLDIFAEFRDQVRTAALSKDPNLARILMELCDSVRDTKLPHAGVRLEDRANSSSVWKLGNKEELLEEIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDMFKLQNDKYSAFNAEGLPTQTINGEAVSKGLLKKLAKEQEKQKKLY 668
BLAST of NO30G00960 vs. NCBI_GenBank
Match: POM58819.1 (Cysteine-tRNA ligase [Phytophthora palmivora var. palmivora]) HSP 1 Score: 383.3 bits (983), Expect = 1.100e-102 Identity = 240/456 (52.63%), Postives = 299/456 (65.57%), Query Frame = 0 Query: 30 SQGALAASAGPSDKRQEHDFALWKRTKDEALEPSWSSPWGRGRPGWHIECSVMASDTFQELSGGRMDIHSGGIDLRFPHHENEVAQAEACLGCHQWVNYWMHAGHLHIKGFKMSKSLKNFITIQEALQTHTARQIRFCFLLSRYNAPMDYGDGTMSNAAALESYFAEFFHNIKAFLRKAGVSQTQHMGVKEKELFHRLQEAKLEIRAAFADDFDIPLALSKLQELVRATNRYL--EDPSPASLLVRAVAEYTTWVFKCLGLASGSEGELGFSSPLRGGIGEGGGXXGGREEVMAPVLDVVASFRDALRAAA---------IEKDAGKVLELCDSLRDSLLPPLGVRLEDKD-GGSIWKLVDPSVLM----KEKAQXXXXXXXXXXXXXXXXXXXXXXXXXAQIPPSVYFQRTQGDKFSGYDPEGFPTHDKEGNPLSKGVLKKLGKEWEGHKKAYAK 470 ++G A SAG SDKR DFALWK++K EP W SPWG GRPGWHIECS MASD + L+GG++D+HSGGIDLRFPHH+NE+AQ+EA QWVNY++H GHL+I+G KMSKSLKNF+ IQEAL ++ RQ+RF FLL +YN PMDY D +M A ++ +FAEFF N+KA LR+ GV +TQ EK L L + K ++ A +DD + PLAL LQ+L + NRY+ + AS+L+RA AEY T + GL + S ++GF PL G G +E ++ PVLD+ A FRD +R AA ++ A VL LCD +RD LP GVRLED+ G +IWKL + L+ K+K XXXXXXXXXXXXXXXXXXXXXXXXX IPPS F + DK+S +D EG PTHD G PLSKG KKL KE K Y K Sbjct: 239 AEGEGALSAGQSDKRNASDFALWKKSKSG--EPFWPSPWGEGRPGWHIECSAMASDALKHLAGGKIDVHSGGIDLRFPHHDNEIAQSEAYFDFSQWVNYFVHTGHLNIEGLKMSKSLKNFVKIQEALMDNSPRQLRFLFLLHKYNVPMDYNDNSMDEAVGVDRFFAEFFANVKARLRELGVEKTQKWTPVEKALHGALLDCKDKVFRALSDDINTPLALLHLQQLAKEVNRYMAGDIEKQASMLIRAAAEYITRILSIFGLVT-SATDIGF--PLSSGTTGG----ADQETILTPVLDIFAQFRDEIREAARSAAAEGSDVKALASTVLRLCDVVRDEKLPYAGVRLEDRSAGAAIWKLANKDELIEELEKKKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXIPPSEMFLGMK-DKYSKFDDEGLPTHDAAGEPLSKGQTKKLAKEQAKQKALYEK 684
BLAST of NO30G00960 vs. NCBI_GenBank
Match: XP_002906718.1 (cysteinyl-tRNA synthetase, putative [Phytophthora infestans T30-4] >EEY66119.1 cysteinyl-tRNA synthetase, putative [Phytophthora infestans T30-4]) HSP 1 Score: 378.6 bits (971), Expect = 2.800e-101 Identity = 237/456 (51.97%), Postives = 296/456 (64.91%), Query Frame = 0 Query: 30 SQGALAASAGPSDKRQEHDFALWKRTKDEALEPSWSSPWGRGRPGWHIECSVMASDTFQELSGGRMDIHSGGIDLRFPHHENEVAQAEACLGCHQWVNYWMHAGHLHIKGFKMSKSLKNFITIQEALQTHTARQIRFCFLLSRYNAPMDYGDGTMSNAAALESYFAEFFHNIKAFLRKAGVSQTQHMGVKEKELFHRLQEAKLEIRAAFADDFDIPLALSKLQELVRATNRYL--EDPSPASLLVRAVAEYTTWVFKCLGLASGSEGELGFSSPLRGGIGEGGGXXGGREEVMAPVLDVVASFRD----ALRAAAIEKD-----AGKVLELCDSLRDSLLPPLGVRLEDKD-GGSIWKLVDPSVLM----KEKAQXXXXXXXXXXXXXXXXXXXXXXXXXAQIPPSVYFQRTQGDKFSGYDPEGFPTHDKEGNPLSKGVLKKLGKEWEGHKKAYAK 470 ++G A SAG SDKR DFALWK++K EP W SPWG GRPGWHIECS MASD + L+GG++D+HSGGIDLRFPHH+NE+AQ+EA QWVNY++H GHL+I+G KMSKSLKNF+ IQEAL ++ RQ+RF FLL +YN PMDY D +M A ++ +F EFF N+KA LR+ GV +TQ EK L L + K ++ A +DD + PLAL LQ+L + NRY+ + P S+L+R+ AEY T + GL + S ++GF +G G +E V+ PVLD+ A FRD A R+AA E A VL LCD +RD LP GVRLED+ G ++WKL + L+ K+K XXXXXXXXXXXXXXXXXXXXXXXXX IPPS F + DK+S +D G PTHD G PLSKG KKL KE K Y K Sbjct: 239 AEGEGALSAGQSDKRNASDFALWKKSKSG--EPFWPSPWGEGRPGWHIECSAMASDALKHLAGGKIDVHSGGIDLRFPHHDNEIAQSEAYFDFSQWVNYFVHTGHLNIEGLKMSKSLKNFVKIQEALMDNSPRQLRFLFLLHKYNVPMDYNDNSMDEAVGVDRFFTEFFANVKARLRELGVEKTQKWTPVEKALHGALLDCKEKVFRALSDDINTPLALLHLQQLAKEVNRYMAGDIEKPTSMLIRSSAEYITRILSIFGLVT-SATDIGFP------LGSGATGGADQETVLTPVLDIFAQFRDEIREAARSAAAEGGDPKALANTVLRLCDVVRDEKLPYAGVRLEDRSAGAAVWKLANKDELIEELEKKKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXIPPSEMFLGMK-DKYSKFDDNGLPTHDAAGEPLSKGQTKKLAKEQAKQKALYEK 684
BLAST of NO30G00960 vs. NCBI_GenBank
Match: XP_009515782.1 (hypothetical protein PHYSODRAFT_552257 [Phytophthora sojae] >EGZ28507.1 hypothetical protein PHYSODRAFT_552257 [Phytophthora sojae]) HSP 1 Score: 376.7 bits (966), Expect = 1.100e-100 Identity = 237/456 (51.97%), Postives = 295/456 (64.69%), Query Frame = 0 Query: 30 SQGALAASAGPSDKRQEHDFALWKRTKDEALEPSWSSPWGRGRPGWHIECSVMASDTFQELSGGRMDIHSGGIDLRFPHHENEVAQAEACLGCHQWVNYWMHAGHLHIKGFKMSKSLKNFITIQEALQTHTARQIRFCFLLSRYNAPMDYGDGTMSNAAALESYFAEFFHNIKAFLRKAGVSQTQHMGVKEKELFHRLQEAKLEIRAAFADDFDIPLALSKLQELVRATNRYL--EDPSPASLLVRAVAEYTTWVFKCLGLASGSEGELGFSSPLRGGIGEGGGXXGGREEVMAPVLDVVASFRDALRAAA---------IEKDAGKVLELCDSLRDSLLPPLGVRLEDKD-GGSIWKLVDPSVLM----KEKAQXXXXXXXXXXXXXXXXXXXXXXXXXAQIPPSVYFQRTQGDKFSGYDPEGFPTHDKEGNPLSKGVLKKLGKEWEGHKKAYAK 470 ++G A SAG SDKR DFALWK++K EP W SPWG GRPGWHIECS MASD + L+GG++D+HSGGIDLRFPHH+NE+AQ+EA QWVNY++H GHL+I+G KMSKSLKNF+ IQEAL ++ RQ+RF FLL +YN PMDY D +M A ++ +F EFF N+KA LR+ GV +TQ EK L L E K ++ A +DD + PLAL LQ+L + NRY+ + AS+L+RA AEY T + GL + S ++GF PL G G +E V+ PVLD+ A FRD +R AA + A VL LCD +RD LP GVRLED+ G ++WKL + L+ K++ XXXXXXXXXXXXXXXXXXXXXXXXX PPS F + DK+S +D G PTHD G PLSKG KKL KE K Y K Sbjct: 241 AEGEGALSAGQSDKRNASDFALWKKSKSG--EPFWPSPWGEGRPGWHIECSAMASDALKHLAGGKIDVHSGGIDLRFPHHDNEIAQSEAYFDFSQWVNYFVHTGHLNIEGLKMSKSLKNFVKIQEALMDNSPRQLRFLFLLHKYNVPMDYNDNSMDEAVGVDRFFTEFFANVKARLRELGVEKTQKWTPVEKALHGALLECKEKVFRALSDDINTPLALLHLQQLAKEVNRYMAGDIEKQASMLIRAAAEYITRILSVFGLVT-SATDIGF--PLSSGATGG----ADQETVLTPVLDIFAQFRDEIREAARSAAADGGDAKALASAVLRLCDVVRDEKLPYAGVRLEDRSAGAAVWKLANKDELIEEIEKKEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXFPPSEMFLGMK-DKYSKFDDNGLPTHDAAGEPLSKGQTKKLAKEQAKQKALYEK 686 The following BLAST results are available for this feature:
BLAST of NO30G00960 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO30G00960 ID=NO30G00960|Name=NO30G00960|organism=Nannochloropsis oceanica|type=gene|length=3905bpback to top protein sequence of NO30G00960.2 >NO30G00960.2-protein ID=NO30G00960.2-protein|Name=NO30G00960.2|organism=Nannochloropsis oceanica|type=polypeptide|length=466bpback to top protein sequence of NO30G00960.1 >NO30G00960.1-protein ID=NO30G00960.1-protein|Name=NO30G00960.1|organism=Nannochloropsis oceanica|type=polypeptide|length=475bpback to top Synonyms
Publications
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