NO30G00950, NO30G00950 (gene) Nannochloropsis oceanica

Overview
NameNO30G00950
Unique NameNO30G00950
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1864
Alignment locationchr30:354049..355912 +

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Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr30genomechr30:354049..355912 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR029063SAM-dependent_MTases
IPR019410Nicotinamide_N-MeTfrase-like
Homology
BLAST of NO30G00950 vs. NCBI_GenBank
Match: XP_020621748.1 (methyltransferase-like protein 23 isoform X2 [Orbicella faveolata])

HSP 1 Score: 85.1 bits (209), Expect = 5.900e-13
Identity = 68/239 (28.45%), Postives = 95/239 (39.75%), Query Frame = 0
Query:  159 ITIHLQECLDGAFGLFLWSAAKKLASFLFRLWQQEPLMFKGKRVIELGAGTALPGLLCAHPFFGTSYVLLTDREDSPLVLENARQSVLLNGHCLTGEAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVAVEGWTWGDPRKFLEGERKGGWDIILAADCCYHEAETEGFLATAAFLLRGYSNFXXXXXXXXXXXVLYMSYPDR-GMEGLRPRFRRWGLTAKEV 397
            I + + E +D  +G+F W AA  LA F   +W       KGK+VIE+GAGTALPGL+ +      ++V LTD+E+ P  LEN RQS   NGH                                                    V V G TWG     L    K   DIIL +DC Y   + +  LAT +FL+                   + +Y +R     +    ++WGL A ++
Sbjct:   18 IEVRIPEIVDPQYGMFTWPAAPVLAQF---IWHNRE-HIKGKQVIEIGAGTALPGLVAS---LCGAHVTLTDKEEYPKCLENCRQSCRANGH--------------------------------------------------DFVKVVGITWGQFTPNLFKLNKA--DIILGSDCFYDTKDFDDILATVSFLME-----------KNLWAKFWTTYQERSSSRSIEDLLQKWGLKAVQI 186          
BLAST of NO30G00950 vs. NCBI_GenBank
Match: XP_008861071.1 (hypothetical protein H310_00176 [Aphanomyces invadans] >ETW09660.1 hypothetical protein H310_00176 [Aphanomyces invadans])

HSP 1 Score: 80.5 bits (197), Expect = 1.500e-11
Identity = 74/256 (28.91%), Postives = 104/256 (40.62%), Query Frame = 0
Query:  167 LDG-AFGLFLWSAAKKLASFLFRLWQQEPLMFKGKRVIELGAGTALPGLLCAHPFFGTSYVLLTDREDSPLVLENARQSVLLNGHCLTGEAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVAVEGWTWGDPRKFLEGERKGGWDIILAADCCYHEAETEGFLATAAFLLRGYSNFXXXXXXXXXXXVLYMSYPDRGME-GLRPRFRRWGLTAKEVEGXXXXXXXXXXXXGVRVYVLEVR 421
            +DG   G ++W +A KLA+F+         +  GKRV+ELGAGTALPGLL A    G ++V+LTD+++  + L NAR ++ LNG   T                                                 + +    WG      +    G  D+ILAADC Y   + E FLAT AF L                 V+Y++Y  R +   + P   RW L A EV               V V+V+E+R
Sbjct:   32 VDGLGIGWYVWPSAIKLATFI----HHNQHLVAGKRVLELGAGTALPGLLAAK--LGAAHVMLTDKDE--VALRNARGAIKLNGIAPT------------------------------------------------TITLMPLAWG------QDFGGGPVDVILAADCFYDPNDFEDFLATMAFTLH-----------RNPHCVVYITYQLRSVHYTIAPYLARWNLQANEVHATNDQGNDNQ----VSVFVVEIR 210          
BLAST of NO30G00950 vs. NCBI_GenBank
Match: XP_015768977.1 (PREDICTED: methyltransferase-like protein 23 [Acropora digitifera])

HSP 1 Score: 79.0 bits (193), Expect = 4.300e-11
Identity = 62/241 (25.73%), Postives = 100/241 (41.49%), Query Frame = 0
Query:  159 ITIHLQECLDGAFGLFLWSAAKKLASFLFRLWQQEPLMFKGKRVIELGAGTALPGLLCAHPFFGTSYVLLTDREDSPLVLENARQSVLLNGHCLTGEAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVAVEGWTWGD--PRKFLEGERKGGWDIILAADCCYHEAETEGFLATAAFLLRGYSNFXXXXXXXXXXXVLYMSYPDR-GMEGLRPRFRRWGLTAKEV 397
            I + + E +D  +G+F W AA  LA F+++  +     FKGK+VIE+GAGT+LPG++ +      ++V+LTD+E+ P  LEN ++S  +NG                                                     + V G TWG   P  F    +    DIIL +DC Y   + +  LAT +FL+   +               + +Y +R     +    ++WGL   E+
Sbjct:   18 INVRIPEIVDPQYGMFTWPAAPVLAQFIWKNKED----FKGKQVIEIGAGTSLPGIVAS---ICGAHVILTDKEEYPQCLENCQRSCDVNGQ--------------------------------------------------KSIKVMGITWGQFTPNLF----KLPKVDIILGSDCFYDTKDFDDILATVSFLIEKNTE-----------AKFWTTYQERSSSRSIEDLLKKWGLRGVEI 186          
BLAST of NO30G00950 vs. NCBI_GenBank
Match: XP_020621747.1 (methyltransferase-like protein 23 isoform X1 [Orbicella faveolata])

HSP 1 Score: 78.2 bits (191), Expect = 7.300e-11
Identity = 42/92 (45.65%), Postives = 56/92 (60.87%), Query Frame = 0
Query:  159 ITIHLQECLDGAFGLFLWSAAKKLASFLFRLWQQEPLMFKGKRVIELGAGTALPGLLCAHPFFGTSYVLLTDREDSPLVLENARQSVLLNGH 251
            I + + E +D  +G+F W AA  LA F   +W       KGK+VIE+GAGTALPGL+ +      ++V LTD+E+ P  LEN RQS   NGH
Sbjct:   18 IEVRIPEIVDPQYGMFTWPAAPVLAQF---IWHNRE-HIKGKQVIEIGAGTALPGLVAS---LCGAHVTLTDKEEYPKCLENCRQSCRANGH 102          
BLAST of NO30G00950 vs. NCBI_GenBank
Match: EXX56094.1 (Nnt1p [Rhizophagus irregularis DAOM 197198w] >PKC15373.1 hypothetical protein RhiirA5_486377 [Rhizophagus irregularis] >PKC70679.1 hypothetical protein RhiirA1_500198 [Rhizophagus irregularis] >PKY16943.1 hypothetical protein RhiirB3_484783 [Rhizophagus irregularis] >PKY37823.1 hypothetical protein RhiirA4_536760 [Rhizophagus irregularis] >POG78209.1 putative methyltransferase-domain-containing protein [Rhizophagus irregularis DAOM 181602=DAOM 197198])

HSP 1 Score: 77.0 bits (188), Expect = 1.600e-10
Identity = 39/89 (43.82%), Postives = 58/89 (65.17%), Query Frame = 0
Query:  160 TIHLQECLDGAFGLFLWSAAKKLASFLFRLWQQEPLMFKGKRVIELGAGTALPGLLCAHPFFGTSYVLLTDREDSPLVLENARQSVLLN 249
            ++ ++E LD  +G ++W AA  LA +   +W +  L FK K ++ELG+GT+LPGLLCA      ++V+LTDR D P +LEN R+   LN
Sbjct:   16 SVIIKELLDPTYGCYVWPAAFVLAEY---IWHERDL-FKDKTILELGSGTSLPGLLCA-LLSDNTHVILTDRSDVPQILENIREIAKLN 99          
BLAST of NO30G00950 vs. NCBI_GenBank
Match: GBC23590.1 (methyltransferase [Rhizophagus irregularis DAOM 181602])

HSP 1 Score: 77.0 bits (188), Expect = 1.600e-10
Identity = 39/89 (43.82%), Postives = 58/89 (65.17%), Query Frame = 0
Query:  160 TIHLQECLDGAFGLFLWSAAKKLASFLFRLWQQEPLMFKGKRVIELGAGTALPGLLCAHPFFGTSYVLLTDREDSPLVLENARQSVLLN 249
            ++ ++E LD  +G ++W AA  LA +   +W +  L FK K ++ELG+GT+LPGLLCA      ++V+LTDR D P +LEN R+   LN
Sbjct:   23 SVIIKELLDPTYGCYVWPAAFVLAEY---IWHERDL-FKDKTILELGSGTSLPGLLCA-LLSDNTHVILTDRSDVPQILENIREIAKLN 106          
BLAST of NO30G00950 vs. NCBI_GenBank
Match: PKK80136.1 (hypothetical protein RhiirC2_704459 [Rhizophagus irregularis])

HSP 1 Score: 77.0 bits (188), Expect = 1.600e-10
Identity = 39/89 (43.82%), Postives = 58/89 (65.17%), Query Frame = 0
Query:  160 TIHLQECLDGAFGLFLWSAAKKLASFLFRLWQQEPLMFKGKRVIELGAGTALPGLLCAHPFFGTSYVLLTDREDSPLVLENARQSVLLN 249
            ++ ++E LD  +G ++W AA  LA +   +W +  L FK K ++ELG+GT+LPGLLCA      ++V+LTDR D P +LEN R+   LN
Sbjct:   16 SVIIKELLDPTYGCYVWPAAFVLAEY---IWHERDL-FKDKTILELGSGTSLPGLLCA-LLSDNTHVILTDRSDVPQILENIREIAKLN 99          
BLAST of NO30G00950 vs. NCBI_GenBank
Match: XP_022782032.1 (methyltransferase-like protein 23 [Stylophora pistillata] >PFX30859.1 Methyltransferase-like protein 23 [Stylophora pistillata])

HSP 1 Score: 75.5 bits (184), Expect = 4.700e-10
Identity = 56/193 (29.02%), Postives = 80/193 (41.45%), Query Frame = 0
Query:  159 ITIHLQECLDGAFGLFLWSAAKKLASFLFRLWQQEPLMFKGKRVIELGAGTALPGLLCAHPFFGTSYVLLTDREDSPLVLENARQSVLLNGHCLTGEAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVAVEGWTWGDPRKFLEGERKGGWDIILAADCCYHEAETEGFLATAAFLL 352
            I + + E ++  +G+F W AA  LA F   +W       KGK+V+E+GAGTALPGL+ +      + V+LTD+E+ P  L+N R+S L NG                                                     + V   TWG     L    K   DIIL +DC Y   + +  LAT +FL+
Sbjct:   18 IEVRIPEIVNPQYGMFTWPAAPVLAQF---IWYNRD-QIKGKQVVEIGAGTALPGLVAS---LCGATVILTDKEEYPQCLDNCRKSCLANGQ--------------------------------------------------DAIQVVSITWGQFTPNLLNLPKA--DIILGSDCFYDTKDFDDILATVSFLM 151          
BLAST of NO30G00950 vs. NCBI_GenBank
Match: EWM20711.1 (hypothetical protein Naga_100789g1 [Nannochloropsis gaditana])

HSP 1 Score: 75.1 bits (183), Expect = 6.200e-10
Identity = 33/59 (55.93%), Postives = 46/59 (77.97%), Query Frame = 0
Query:  150 APLSSSPRPITIHLQECLDGAFGLFLWSAAKKLASFLFRLWQQEPLMFKGKRVIELGAG 209
            +PL      +TIH+QECLD AFGL++W ++ KLAS+L+ L+++ P  F+GKRVIELGAG
Sbjct:   98 SPLPPRAPSLTIHVQECLDEAFGLYVWPSSVKLASYLYHLFERYPDFFRGKRVIELGAG 156          
BLAST of NO30G00950 vs. NCBI_GenBank
Match: XP_018530387.1 (PREDICTED: methyltransferase-like protein 23 isoform X1 [Lates calcarifer] >XP_018530388.1 PREDICTED: methyltransferase-like protein 23 isoform X1 [Lates calcarifer])

HSP 1 Score: 73.9 bits (180), Expect = 1.400e-9
Identity = 64/242 (26.45%), Postives = 97/242 (40.08%), Query Frame = 0
Query:  159 ITIHLQECLDGAFGLFLWSAAKKLASFLFRLWQQEPLMFKGKRVIELGAGTALPGLLCAHPFFGTSYVLLTDREDSPLVLENARQSVLLNGHCLTGEAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVAVEGWTWGD--PRKFLEGERKGGWDIILAADCCYHEAETEGFLATAAFLLRGYSNFXXXXXXXXXXXVLYMSYPDRGME-GLRPRFRRWGLTAKEVE 398
            +++ + E LD  +G+++W  A  LA +L+   ++     +G+ V+ELGAG +LPG++ A      + V+L+D  DSPL LEN R+S   NG                                                     V V G TWGD  P   L  E     D IL +D  Y   + E  L T AFLLR                  + +Y +R  +  ++P   RW L+  +V+
Sbjct:   28 LSVSIPEVLDPQYGMYVWPCAVVLAQYLWTHREE----LRGRTVLELGAGVSLPGVVAAR---CGAQVILSDSADSPLCLENCRRSCEANG--------------------------------------------------LPDVQVLGLTWGDVSPDLVLLPE----LDFILGSDVFYEPRDFEDVLVTVAFLLR-----------KNPRAQFWTTYQERSSDWSIQPLLHRWSLSCVDVQ 197          
The following BLAST results are available for this feature:
BLAST of NO30G00950 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_020621748.15.900e-1328.45methyltransferase-like protein 23 isoform X2 [Orbi... [more]
XP_008861071.11.500e-1128.91hypothetical protein H310_00176 [Aphanomyces invad... [more]
XP_015768977.14.300e-1125.73PREDICTED: methyltransferase-like protein 23 [Acro... [more]
XP_020621747.17.300e-1145.65methyltransferase-like protein 23 isoform X1 [Orbi... [more]
EXX56094.11.600e-1043.82Nnt1p [Rhizophagus irregularis DAOM 197198w] >PKC1... [more]
GBC23590.11.600e-1043.82methyltransferase [Rhizophagus irregularis DAOM 18... [more]
PKK80136.11.600e-1043.82hypothetical protein RhiirC2_704459 [Rhizophagus i... [more]
XP_022782032.14.700e-1029.02methyltransferase-like protein 23 [Stylophora pist... [more]
EWM20711.16.200e-1055.93hypothetical protein Naga_100789g1 [Nannochloropsi... [more]
XP_018530387.11.400e-926.45PREDICTED: methyltransferase-like protein 23 isofo... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR073ncniR073Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR097ngnoR097Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO30G00950.1NO30G00950.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100789g1gene9696Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO30G00950.1NO30G00950.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO30G00950 ID=NO30G00950|Name=NO30G00950|organism=Nannochloropsis oceanica|type=gene|length=1864bp
ATGCCGCAGTTCTCTGTCAACCTCCTCCCTCCCTTCCTTCAACCCCCTTC
CCAACAACCACACAGCGGGAAGCAAGCAGCAACGCTTGTGTATGGTATGA
AAAAAGTCGTCCGATCCATCACTTTTCCGATCGGCGCACCGATATGTGGC
AGTAACCCCAGCAGTAGCAACCGCAGTAGCAGCAACCGCAGCAGCAGCAA
CAGCTGCGAAAAGGAGGAGGAGCAGGAAGAGGAGGAGGACGATGACCAGT
GGCAGCGCCACCACCAAAAGAGATGCAAGACGAACGAAGCTTCTGCTGCA
GCTGCTGATACTGCTGATAGAGGCGTTTGTCGTACTCCTCTTGCTGCTGG
GTCAAAAGGAATAGAAGAAGCAGCAGAAGCAGCAGCAGCAGAAGCAGTAA
CAGCAGCAGCTACAACACCAACACCAAAAACCACCGCGTTGGGCGTAGCT
CCCCTTTCCTCCTCCCCCCGCCCCATCACCATCCACCTACAAGAATGCCT
CGATGGCGCTTTTGGCTTGTTCCTGTGGTCCGCCGCCAAGAAGTTGGCCT
CTTTCCTCTTCAGGTTGTGGCAGCAGGAGCCTTTAATGTTCAAAGGCAAG
CGTGTCATTGAGCTCGGGGCTGGgtacgtgcactagcaccataagagggg
ggagagaaggacagaggggagggagggagggagggagagagggacggaat
gggagggaaggaaggaaggagggagggaggggttcgtctttggggctcgt
caaggataacggccatgggaccagagatggaagcagggcctatttaatgc
cccttttttctacgcacttgtatagattcttacccctccctccctccctc
cctacctccccccctccctcttctcttctgtttcagCACCGCGCTTCCAG
GCTTGTTGTGCGCCCATCCCTTCTTCGGCACCTCTTATGTCCTCCTCACG
GACAGGGAGGACTCCCCGTTAGTGCTGGAGAACGCCCGACAGTCGGTACT
TTTGAATGGGCACTGCCTAACCGGGGAAGCAGGAGGGGGAGGAGGGGGAA
TAGGAGGGGGGAGAGGAGGAGTAGGAGGAGGAGGAGGAGGAGGGGGAATA
GGAGGGGGAATAGGAGAGGGGAGAGGAGGAGGAGGAGGAGGAGGAGGAGG
AGGAGGAGAGGGAACGGTAGTGGCAGTAGAGGGATGGACATGGGGAGACC
CAAGGAAATTCCTGGAGGGAGAAAGAAAAGGAGGATGGGATATCATCCTA
GCTGCGGACTGCTGTTACCACGAGGCCGAAACGGAAGGGTTTCTCGCAAC
GGCTGCGTTTCTGTTGAGGGGCTATTCCAATTTCTCCTCTTCTTCTTCTT
CCTCCTCCTCCTCACCTGTCCTTTACATGAGCTACCCGGACAGGGGGATG
GAAGGCCTCCGTCCTCGTTTTCGTCGATGGGGCCTGACAGCCAAGGAGGT
GGAGGGAGGGGGGGAGGACGAGGAGGAGAGCGAGGAGGAGGAGGGGGTGA
GGGTTTATGTTCTGGAAGTGCGCTTGGCGAGGAATGCAAAAGAAGGGAAG
GGCGAGAGGGAGGGTGGGAAGGAGGGCGGGAAGGAGGGAGGGACGGGATG
AGCAGAGGGCGGGAGGGAGGCAGAAAAGGAAGAGGAAAGGAGGAAGAAGA
AGAGGAGGAGGAGAAGAGATGCAAGAGAAGAAGGAGGAGACACAGGAGGA
GGAGGCAAAGGCCGGTAGAATAAGAATTAAAAGTATTTAAAGTGTGCACA
AGCTAATGAAAATCGGAAGAGATGTAAAAGATGTCTTGTGAACGATATTA
TTTTGCCATAAGAACATTAAAGAAATACCTTGAGAATAATGTAATTACAA
AAAAACTTGTATGT
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protein sequence of NO30G00950.1

>NO30G00950.1-protein ID=NO30G00950.1-protein|Name=NO30G00950.1|organism=Nannochloropsis oceanica|type=polypeptide|length=446bp
MPQFSVNLLPPFLQPPSQQPHSGKQAATLVYGMKKVVRSITFPIGAPICG
SNPSSSNRSSSNRSSSNSCEKEEEQEEEEDDDQWQRHHQKRCKTNEASAA
AADTADRGVCRTPLAAGSKGIEEAAEAAAAEAVTAAATTPTPKTTALGVA
PLSSSPRPITIHLQECLDGAFGLFLWSAAKKLASFLFRLWQQEPLMFKGK
RVIELGAGTALPGLLCAHPFFGTSYVLLTDREDSPLVLENARQSVLLNGH
CLTGEAGGGGGGIGGGRGGVGGGGGGGGIGGGIGEGRGGGGGGGGGGGEG
TVVAVEGWTWGDPRKFLEGERKGGWDIILAADCCYHEAETEGFLATAAFL
LRGYSNFSSSSSSSSSSPVLYMSYPDRGMEGLRPRFRRWGLTAKEVEGGG
EDEEESEEEEGVRVYVLEVRLARNAKEGKGEREGGKEGGKEGGTG*
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Synonyms
Publications