NO30G00940, NO30G00940 (gene) Nannochloropsis oceanica

Overview
NameNO30G00940
Unique NameNO30G00940
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1432
Alignment locationchr30:352270..353701 -

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Properties
Property NameValue
DescriptionDual specificity phosphatase ibp1
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr30genomechr30:352270..353701 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036873Rhodanese-like_dom_sf
IPR001763Rhodanese-like_dom
Homology
[Close]
BLAST of NO30G00940 vs. NCBI_GenBank
Match: XP_003719350.1 (hypothetical protein MGG_01909 [Magnaporthe oryzae 70-15] >EHA46983.1 hypothetical protein MGG_01909 [Magnaporthe oryzae 70-15] >ELQ35505.1 hypothetical protein OOU_Y34scaffold00706g9 [Magnaporthe oryzae Y34] >ELQ69547.1 hypothetical protein OOW_P131scaffold00145g4 [Magnaporthe oryzae P131])

HSP 1 Score: 98.6 bits (244), Expect = 2.100e-17
Identity = 61/144 (42.36%), Postives = 85/144 (59.03%), Query Frame = 0 
Query:   42 TPEFLEAAAVRDLILAQRDQAASQRKVQIVDVRGSDFSEGKLPGALNVASEGLKDMDRVDKLVEELMDKEMVIFHCGKSHQRGPQSAARFL----------SRLQAATAAAVAAGKDVGPKVYVLKGGWEGWQKQYGEEEGMVE 176
            T E + AA +RDL+LA++   A   KV +VDVR  D+  G + GALNV S+ L+   R+  L+ +L DK  VIFHC  S QRGP +A R++          +   AA ++A  A + V  KVYVL  G+ GWQ+ YGE+E + E
Sbjct:    6 TLERIPAAKLRDLLLAEK---ADDPKVAVVDVRDDDYIGGHIKGALNVPSQQLE--ARMPTLIRQLQDKPTVIFHCALSQQRGPGAALRYIRERDEALKKANDKDAAASSAPGASQPVEQKVYVLDRGFVGWQEVYGEDENLTE 144
[Close]
BLAST of NO30G00940 vs. NCBI_GenBank
Match: EWM20710.1 (dual specificity phosphatase cdc25 [Nannochloropsis gaditana])

HSP 1 Score: 88.6 bits (218), Expect = 2.200e-14
Identity = 60/178 (33.71%), Postives = 91/178 (51.12%), Query Frame = 0 
Query:   30 ARTSSTTISPFPTPEFLEAAAVRDLILAQRDQAASQRKVQIVDVRGSDFSEGKLPGALNVASEGLKDMDRVDKLVEELMDKEMVIFHCGKSHQRGPQSAARFLSRLQAAT----AAAV------AAGKDVG-------------------PKVYVLKGGWEGWQKQYGEEEGMVEALE 179
            A +SS+       P ++E   +  ++ A+R +     K+QI+DVR  D++  KLPGA+NV SE  +D +RV  L E L D +M++ HC  S  RGP  +AR ++    A      AA       ++G++ G                   P+V VL+GG++GW  +Y EE GMVE  E
Sbjct:   96 AMSSSSVSHALSGPAYIEQEELLAILHARR-RGERSLKLQILDVRDDDYTVAKLPGAINVPSEDWRDEERVVALAESLKDHDMIVLHCMLSQVRGPFCSARLMAHFSCAVGEDGGAATKQERNQSSGRNDGEETLPANESKKERRREQGVPQVLVLRGGFQGWYARYREEIGMVEPCE 272
[Close]
BLAST of NO30G00940 vs. NCBI_GenBank
Match: XP_009225261.1 (hypothetical protein GGTG_09153 [Gaeumannomyces tritici R3-111a-1] >EJT72287.1 hypothetical protein GGTG_09153 [Gaeumannomyces tritici R3-111a-1])

HSP 1 Score: 85.9 bits (211), Expect = 1.400e-13
Identity = 58/153 (37.91%), Postives = 77/153 (50.33%), Query Frame = 0 
Query:   35 TTISPFPTPEFLEAAAVRDLILAQRDQAASQRKVQIVDVRGSDFSEGKLPGALNVASEGLKDMDRVDKLVEELMDKEMVIFHCGKSHQRGPQSAARFLSRLQAATAAAVAAGKDVGP------------KVYVLKGGWEGWQKQYGEEEGMVE 176
            TTI+   T E + AA +RDL+LA     A   K+ +VDVR  D+  G + G LN  S  L     +  LV +L DK  V+FHC  S QRGP +A R++   +A    +   G    P            KVYVL  G+ GWQ+ YGE E + E
Sbjct:    2 TTIA---TLERISAAKLRDLMLA---PGADSTKIAVVDVRDDDYIGGHIKGCLNYPSHTLD--ATMPSLVRQLQDKPTVVFHCALSQQRGPGAALRYIREREALLTKSKEPGTTADPASKEATAPPVQQKVYVLDRGFVGWQEAYGENEALTE 146
[Close]
BLAST of NO30G00940 vs. NCBI_GenBank
Match: XP_001223619.1 (hypothetical protein CHGG_04405 [Chaetomium globosum CBS 148.51] >EAQ87786.1 hypothetical protein CHGG_04405 [Chaetomium globosum CBS 148.51])

HSP 1 Score: 85.1 bits (209), Expect = 2.400e-13
Identity = 54/137 (39.42%), Postives = 79/137 (57.66%), Query Frame = 0 
Query:   42 TPEFLEAAAVRDLILAQRDQAAS-QRKVQIVDVRGSDFSEGKLPGALNVASEGLKDMDRVDKLVEELMDKEMVIFHCGKSHQRGPQSAARFLSRLQAATAAAVAAGKD--VGPKVYVLKGGWEGWQKQYGEEEGMVE 176
            T + L AA++   +L  +++A S    + I+DVR  D+  G + G+LN+ S  L  M  +  LV +L DK+ V+FHC  S QRGP +A R+L   +     A   GKD  V  KV+VL  G+ GWQ+ YGE+E + E
Sbjct:    6 TLQRLSAASLSQTLLEAQERATSGDPTIAIIDVRDDDYIGGHIKGSLNIPSRTLDAM--LPTLVRQLQDKQTVVFHCALSQQRGPAAALRYLRERE---RIAGEGGKDGVVEQKVFVLDRGFVGWQEVYGEDERLTE 137
[Close]
BLAST of NO30G00940 vs. NCBI_GenBank
Match: XP_011126469.1 (hypothetical protein AOL_s00176g31 [Arthrobotrys oligospora ATCC 24927] >EGX44860.1 hypothetical protein AOL_s00176g31 [Arthrobotrys oligospora ATCC 24927])

HSP 1 Score: 84.0 bits (206), Expect = 5.400e-13
Identity = 50/128 (39.06%), Postives = 69/128 (53.91%), Query Frame = 0 
Query:   60 DQAASQRKVQIVDVRGSDFSEGKLPGALNVASEGLKDMDRVDKLVEELMDKEMVIFHCGKSHQRGPQSAARFLSRLQAATAAAVAA------------GKDVGPKVYVLKGGWEGWQKQYGEEEGMVE 176
            D    Q K+ IVDVR SD+  G L G L+  S       R+D L+EEL D + V+FHC  S QRGP +A +++   +A  A    A            GK V  +VYVL+GG+  WQ++YG +E + E
Sbjct:   33 DGTTKQEKIAIVDVRDSDYIGGHLIGCLHRPSSTFS--IRLDSLIEELKDHDKVVFHCALSQQRGPSAALKYVREKKALEARKRIASSEEDELLYKNVGKKVDQEVYVLEGGFVEWQQKYGSDERLTE 158
[Close]
BLAST of NO30G00940 vs. NCBI_GenBank
Match: XP_003660248.1 (hypothetical protein MYCTH_2298329 [Thermothelomyces thermophila ATCC 42464] >AEO55003.1 hypothetical protein MYCTH_2298329 [Thermothelomyces thermophila ATCC 42464])

HSP 1 Score: 83.2 bits (204), Expect = 9.300e-13
Identity = 56/150 (37.33%), Postives = 80/150 (53.33%), Query Frame = 0 
Query:   42 TPEFLEAAAVRDLIL-AQRDQAASQRKVQIVDVRGSDFSEGKLPGALNVASEGLKDMDRVDKLVEELMDKEMVIFHCGKSHQRGPQSAARFL--------SRLQAATAAAVAAGKDVG-------PKVYVLKGGWEGWQKQYGEEEGMVE 176
            T + L AA++  L+L AQ   AA    + ++DVR  D+  G + G++NV S  L  M  +  LV +L DKE V+FHC  S QRGP +A R++        +  +AA      AG D G        KV+VL  G+ GWQ+ YG +E + E
Sbjct:    6 TLQRLSAASLSKLLLAAQEATAAGDPTIAVIDVRDDDYIGGHIKGSVNVPSRTLDAM--LPTLVRQLQDKETVVFHCALSQQRGPAAALRYIRERERILSANKKAARPETDGAGADPGEGAAAKEQKVFVLDRGFVGWQEAYGTDERLTE 153
[Close]
BLAST of NO30G00940 vs. NCBI_GenBank
Match: XP_006693979.1 (phosphoprotein phosphatase-like protein [Chaetomium thermophilum var. thermophilum DSM 1495] >EGS21683.1 phosphoprotein phosphatase-like protein [Chaetomium thermophilum var. thermophilum DSM 1495])

HSP 1 Score: 82.8 bits (203), Expect = 1.200e-12
Identity = 57/145 (39.31%), Postives = 78/145 (53.79%), Query Frame = 0 
Query:   42 TPEFLEAAAVRDLILAQRDQAA---SQRKVQIVDVRGSDFSEGKLPGALNVASEGLKDMDRVDKLVEELMDKEMVIFHCGKSHQRGPQSAARFL---SRLQAATAAAVAAGKDVGP-----KVYVLKGGWEGWQKQYGEEEGMVE 176
            T + L A ++  LILA ++ AA   S   + I+DVR  D+  G + G+ NV S  L  M  +  LV +L DK+ V+FHC  S QRGP +A R+L    RL     A    G D  P     KVYVL  G+ GWQ+ +G +E + E
Sbjct:    6 TLQRLSATSLSKLILAAQEAAAAGDSTPSLAIIDVRDDDYIGGHIKGSQNVPSRTLDAM--LPTLVRQLQDKDTVVFHCALSQQRGPSAALRYLRERERLLPTWNARAREGDDDAPKPKEQKVYVLDRGFVGWQELFGTDERLTE 148
[Close]
BLAST of NO30G00940 vs. NCBI_GenBank
Match: XP_024572581.1 (rhodanese-like protein [Plasmopara halstedii] >CEG36212.1 rhodanese-like protein [Plasmopara halstedii])

HSP 1 Score: 82.8 bits (203), Expect = 1.200e-12
Identity = 44/132 (33.33%), Postives = 78/132 (59.09%), Query Frame = 0 
Query:   44 EFLEAAAVRDLILAQRDQAASQRKVQIVDVRGSDFSEGKLPGALNVASEGLKDMDRVDKLVEELMDKEMVIFHCGKSHQRGPQSAARFLSRLQAATAAAVAAGKDVGPKVYVLKGGWEGWQKQYGEEEGMVE 176
            ++++ +A+ D++   RD  +S ++  I+DVR +D++ G +  A+N+  +   D D VD LV    D++ V+FHC  S  RGP  A RF+SR++      +  G    P+V +L+GG+E + K Y +E  ++E
Sbjct:    5 QYIQPSALVDML---RDTNSSIKRPVIIDVRDTDYAGGHIRSAVNITEDNFMDDDDVDALVGMYKDEDAVVFHCMMSQVRGPSCAKRFMSRME-----VILEGATHKPRVLILQGGYERFGKIYKDEADLIE 128
[Close]
BLAST of NO30G00940 vs. NCBI_GenBank
Match: KEY66318.1 (hypothetical protein S7711_02780 [Stachybotrys chartarum IBT 7711] >KFA49927.1 hypothetical protein S40293_01247 [Stachybotrys chartarum IBT 40293] >KFA78694.1 hypothetical protein S40288_01664 [Stachybotrys chartarum IBT 40288])

HSP 1 Score: 82.0 bits (201), Expect = 2.100e-12
Identity = 52/139 (37.41%), Postives = 77/139 (55.40%), Query Frame = 0 
Query:   42 TPEFLEAAAVRDLILAQRDQAASQRKVQIVDVRGSDFSEGKLPGALNVASEGLKDMDRVDKLVEELMDKEMVIFHCGKSHQRGPQSAARFL----SRLQAATAAAVAAGKDVGPKVYVLKGGWEGWQKQYGEEEGMVEA 177
            T + + A  + D IL   + +++     IVDVR  D   G + G+ NV S  L  M  +  LV +L DK++V+FHC  S QRGP +A ++L      L+A        G+  G +V+VL GG+ GWQ+ YGE+E + EA
Sbjct:    6 TLQRVTAKVLSDRIL--EEASSADPSYAIVDVRDDDHLGGHIKGSTNVPSRQLDVM--MPTLVRKLQDKKVVVFHCALSQQRGPSAALKYLRERDGHLKALGLKKEGKGEGEGQEVFVLDGGFVGWQETYGEDERLTEA 140
[Close]
BLAST of NO30G00940 vs. NCBI_GenBank
Match: XP_009831777.1 (hypothetical protein H257_07823, partial [Aphanomyces astaci] >ETV79058.1 hypothetical protein H257_07823, partial [Aphanomyces astaci])

HSP 1 Score: 81.6 bits (200), Expect = 2.700e-12
Identity = 46/114 (40.35%), Postives = 65/114 (57.02%), Query Frame = 0 
Query:   64 SQRKVQIVDVRGSDFSEGKLPGALNVASEGLKDMDRVDKLVEELMDKEMVIFHCGKSHQRGPQSAARFLSRLQAATAAAVAAGKDVGPKVYVLKGGWEGWQKQYGEEEGMVEAL 178
            ++  V+IVDVR  DF+ G + GA+NV  E   D D VD  V+E+     +IFHC  S  RGP  A RF SR+ A    A      + PKV VL GG++ +++ Y  ++ +VE L
Sbjct:   30 ARNAVRIVDVRDGDFAGGHIRGAINVPEEHFHDDDDVDNFVDEMKTVPTIIFHCMMSQVRGPFCAHRFQSRVNAVLEHAA-----IKPKVLVLTGGFQLFRQNYSHDDDLVEGL 138
The following BLAST results are available for this feature:
BLAST of NO30G00940 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_003719350.12.100e-1742.36hypothetical protein MGG_01909 [Magnaporthe oryzae... [more]
EWM20710.12.200e-1433.71dual specificity phosphatase cdc25 [Nannochloropsi... [more]
XP_009225261.11.400e-1337.91hypothetical protein GGTG_09153 [Gaeumannomyces tr... [more]
XP_001223619.12.400e-1339.42hypothetical protein CHGG_04405 [Chaetomium globos... [more]
XP_011126469.15.400e-1339.06hypothetical protein AOL_s00176g31 [Arthrobotrys o... [more]
XP_003660248.19.300e-1337.33hypothetical protein MYCTH_2298329 [Thermothelomyc... [more]
XP_006693979.11.200e-1239.31phosphoprotein phosphatase-like protein [Chaetomiu... [more]
XP_024572581.11.200e-1233.33rhodanese-like protein [Plasmopara halstedii] >CEG... [more]
KEY66318.12.100e-1237.41hypothetical protein S7711_02780 [Stachybotrys cha... [more]
XP_009831777.12.700e-1240.35hypothetical protein H257_07823, partial [Aphanomy... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR073ncniR073Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR097ngnoR097Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO30G00940.1NO30G00940.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|610418gene_10206Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO30G00940.1NO30G00940.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO30G00940 ID=NO30G00940|Name=NO30G00940|organism=Nannochloropsis oceanica|type=gene|length=1432bp
ATGACGACCCCCGCGGCCGTCACCACTACTACCGACAACAATGAGAGCAG
CAGCAATAGCAGCAGTGGGAGCAACATTGCGCCAACTGCCCGTACCAGCA
GCACCACCATATCTCCCTTCCCTACGCCCGAGTTTCTCGAGGCCGCCGCT
GTGCGGGATCTGATCCTGGgtatgtcctttcttaattgctttggttcaag
caaagctcgtccaaccagacttcactccatgcatcccttcggtttcactt
tcctttcttcctttcctgctgcagtgaattgaatcgcaatcctttccttc
ccgccctccctccctcccctcttccctctcgccctccctccctccctccc
tctcacgacagCCCAAAGGGACCAGGCCGCAAGCCAACGGAAGGTTCAAA
TTGTGGATGTCCGAGGCTCGGATTTTTCCGgtaaagaggaagggagggag
ggagggcgagagggaagagggaagggagggagggattgaatggaagatgg
cctacgatacctacattatgtagctcacttctcctccctccctccttccc
ttccttcctctctccctttcttccctcctttcgaaaggtcaagtccagaa
tctctgactttccctccacaaaaccccaccctccctccctccctccctcc
ctccctccttgttcagAGGGCAAATTACCTGGGGCCCTCAACGTGGCCAG
TGAAGGGTTGAAGGACATGGACCGCGTCGATAAGCTTGTGGAGGAGCTAA
TGgtagggacggagggaaggaagggcggcaacggatgatgacagacagaa
atttcggtgtcgctttcctcggtgtctcacatcttttgttacctctccct
ccctctcttcttccctccttctctccttccctcctcccttcaatttacaa
gGACAAGGAGATGGTCATCTTCCACTGTGGCAAGgtacgaattaaaagcc
ctttcctccctccctccctccctccctccctccctctccccatccttcct
tccattcattcgccccaccctccttccctccctctcttcacagAGCCATC
AACGCGGTCCACAATCTGCCGCACGTTTCCTCTCCCGCCTTCAGGCTGCC
ACTGCTGCTGCTGTAGCTGCTGgtacgtgtgtttttcccctctccgcctt
ctctctttcttttttcccccgggagagaagggggggggggcttgccgcaa
tatctccttttcctctcttctctctgcttccttccttccttttatgtcct
cttactttgtccctgatgactcatcgttccactgtacgacccttccctcc
ctccctccctccctgccagGTAAGGACGTGGGACCCAAAGTCTATGTTTT
GAAGGGAGGGTGGGAAGGGTGGCAGAAGCAATACGGGGAGGAGGAAGGGA
TGGTGGAGGCCTTGGAAGATATCCCCATGTGA
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protein sequence of NO30G00940.1

>NO30G00940.1-protein ID=NO30G00940.1-protein|Name=NO30G00940.1|organism=Nannochloropsis oceanica|type=polypeptide|length=183bp
MTTPAAVTTTTDNNESSSNSSSGSNIAPTARTSSTTISPFPTPEFLEAAA
VRDLILAQRDQAASQRKVQIVDVRGSDFSEGKLPGALNVASEGLKDMDRV
DKLVEELMDKEMVIFHCGKSHQRGPQSAARFLSRLQAATAAAVAAGKDVG
PKVYVLKGGWEGWQKQYGEEEGMVEALEDIPM*
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Synonyms
Publications