NO30G00710, NO30G00710 (gene) Nannochloropsis oceanica

Overview
NameNO30G00710
Unique NameNO30G00710
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2414
Alignment locationchr30:259097..261510 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr30genomechr30:259097..261510 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO30G00710 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR051ncniR051Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR102ngnoR102Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO30G00710.1NO30G00710.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO30G00710.2NO30G00710.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO30G00710.1NO30G00710.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO30G00710.2NO30G00710.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO30G00710 ID=NO30G00710|Name=NO30G00710|organism=Nannochloropsis oceanica|type=gene|length=2414bp
AATGGTCCCTATTTTGATATGGCCCACCCACAACCCACACCAACTCACCC
TCCTAGGGCTGCTTTTTGGTGTCTCCTTTTTTGCCAAAAAGGGCTTTTTG
GCTTCCTCTCACTATTCTGATTGCAACCATTTCAGGCACATGTCTCACAT
CCTCTCACTTCTTACAAAAACACAAAAAATGTAAAATCCTGGGTTTTGCG
TTCCTCATTTTCGACGGAGAACTGCGACCCCACCACATTTTCTCGCGCGG
CGTGTGCATTGAGCTCCAAGCATGAACAGAACACTTGCAGCCTAAACTTT
GAGCTCAACCTTGGCAGCCATACCTCTTGGCAGGGTCAGGATTGCATTTA
CATACGTCTTCCTTGTCCCTGCGGGCGGCATTTAAAACTACCCCCCTCCG
TAGGTCATCCTTGACCCTAATCCCTCCTAAATCTCACTCCTGCCTGATCA
TCATCCATAGCAAGCCCTACAAAGATAATTTTGAAAGCATTATTGGTCGC
TGCTCGTCCTCATACCATGGCTCCACGTGCCACGCAGCTGCGCTTTTTCA
TTCTCTTTTTGCGTGGGGGCATGTAAGCTGCCAAATTAATCGGCCAGGAA
GAGAGCGAAACTTAGCTCGTCTTGCTTTTATGCGACGTTCAAGCTCGCAT
TTAAAGCGCATAATCGTCGACTTACTTATCTTACGACTATTTCGCCCTGT
ATTTCATCCTCTCGTCCCCCTTTTCCCTTTCCTCCCCTCCTTCCTCACAC
ACCGCCTAAAAGCAATACTACGCGTTAAAATAGACCACCTCGTCCGCGCT
TGGATAGATACACGCCCAGTCCAAAACACCTACGACCAGAACAAGCAAGA
TGAGCGACATCCCATACGAAGACCAGTTTAAGCATATCGAGGGCGGGGAA
TACGAATTCCGTAGGTCTTGTTATTGGCTTCACTTGTTCGCTACTCATAC
ACTCACCCGCTTCCTGTCCCTTCGTCCCTGGTTTTCTCTCAATGATGTTG
GAGAACGTAAATTTTCTGTGTCTGCCATGGGTTTATCAGGCACCCAAGCT
TACTCTACTCCTCTGCTGATGTGTGCTTCTCTCCCTCCCTAACTCTCCCC
TTCACTCACTCCTTCTTTTCAGTACCGCAGGATATGGGCCCTGGTAGTGT
AGAGCGAGCAGGGAGCTTCGAAGCTCATACAGgtaggtggaggaggtaag
gattggagatagagacgagaaaggggagagaattgggaagacatcgcaaa
atgagagacaggcatgtagcctttgatatctcgcatcgggtccatgcgta
caccaccctccatactttgagctcttcttctttttcatttttctccacct
cctcctcctttttctgtccctctctatttatgactccatggacatgcacc
tgccgcatcatccatcagCACAGCAAGCCCGCGGTGGCAAAGGACAAGGA
GGAGAAGGAGAAGGAGAAGGAGAGGAAGGGTTGGAGGAAGGCGACGAGGA
AGAGCCTCCGAAAATGCTTGCATGTGATGAGAAGGGAGAGGTTAAAGCAC
CTCAGGTCTATCGTTCAACCAGTGGTGCCAAAGGAAGCTCCATCCTGCCA
GGGAAGGAGGGAGGGAGGGAGGGAGGGAAGGAGGGAGCGACGCGACAGGG
ATTTGCGCGAGGAGCTGTGGCGGGGGTGTCGACGGTGATGGAGGAAAAAG
GAGGAGAAGAGAGGGGAGAAGGGGGGATAAGGATACAGGGGACTTCGTCG
GGGGTCGGAGAGCTCGAGAGGGGTTGAGGGAGGAAGGGAGTAAGGAAGGA
GGGGAGGAAGGGAGGGAGGGTGAGAGGAAAGAGGAAAGAGGAAAGAAGGG
AGAATACAAAAGATTTTTGGGGTATTAGAGAGAGAAAAGAGGTGAAAAAG
GAGGGGACGAAAGAATATTTATATATGTACCAAAAACTAGTAAAAGCGAG
AAAGAGAGACCGGGAGGGAGGGAGAAAACGAGATGTGGTGACATGGAGAG
AGAGAGACTGGAGACATCCACACACAGAGAGAGACAGAGACAGACAGAGA
CAGAGACAGAAGGGGGGAGAGAGAGGGAGAGGGAAAGAGCAAAGAAAGAA
TTAGAGCAGCCCCATTAACATAAGAAGAAAAGGTACTGATTGAAAAGAGA
TAGGCAGGAAAGGGAGCATGAGGAGAAGAAGGGAAGGAGATCGGACAATG
GGAGACGACATCAATGCCAGGGTACATTGCCATGGGACATGGGCGTACGT
GCAAGTATTGTTACTCGTCTTCCCTCTCCTCCCTCCCTCCCTCCCTTCCT
TCCTTCCTTCCCCTCTTTGCACCTCCAGGCATGCGGCGAAGAAGAATTCA
CATCAGACATGTCAACAGGTTAAAGCTTAAACAGAAAGAAGCGAAAAAAA
CAAGTACACTCAGG
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protein sequence of NO30G00710.1

>NO30G00710.1-protein ID=NO30G00710.1-protein|Name=NO30G00710.1|organism=Nannochloropsis oceanica|type=polypeptide|length=160bp
MSDIPYEDQFKHIEGGEYEFLPQDMGPGSVERAGSFEAHTAQQARGGKGQ
GGEGEGEGEEGLEEGDEEEPPKMLACDEKGEVKAPQVYRSTSGAKGSSIL
PGKEGGREGGKEGATRQGFARGAVAGVSTVMEEKGGEERGEGGIRIQGTS
SGVGELERG*
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protein sequence of NO30G00710.2

>NO30G00710.2-protein ID=NO30G00710.2-protein|Name=NO30G00710.2|organism=Nannochloropsis oceanica|type=polypeptide|length=136bp
MGPGSVERAGSFEAHTAQQARGGKGQGGEGEGEGEEGLEEGDEEEPPKML
ACDEKGEVKAPQVYRSTSGAKGSSILPGKEGGREGGKEGATRQGFARGAV
AGVSTVMEEKGGEERGEGGIRIQGTSSGVGELERG*
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Synonyms
Publications