NO30G00640, NO30G00640 (gene) Nannochloropsis oceanica

Overview
NameNO30G00640
Unique NameNO30G00640
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2139
Alignment locationchr30:241355..243493 +

Link to JBrowse

Properties
Property NameValue
DescriptionBiotin synthetase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr30genomechr30:241355..243493 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0009102biotin biosynthetic process
GO:0009987cellular process
GO:0009058biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0004076biotin synthase activity
GO:0003824catalytic activity
GO:0051536iron-sulfur cluster binding
GO:0016740transferase activity
GO:0005488binding
Vocabulary: INTERPRO
TermDefinition
IPR002684Biotin_synth/BioAB
IPR007197rSAM
IPR006638Elp3/MiaB/NifB
IPR010722BATS_dom
Homology
BLAST of NO30G00640 vs. NCBI_GenBank
Match: CBN74306.1 (biotin synthase [Ectocarpus siliculosus])

HSP 1 Score: 507.3 bits (1305), Expect = 4.800e-140
Identity = 250/340 (73.53%), Postives = 287/340 (84.41%), Query Frame = 0
Query:   64 ETRVMGNTRAVLRNDWTRAEIQALYDQPFIELLYQAATIHRMYWNPQEVQQCTLLSIKTGGCTEDCKYCSQSVRYKTHVKPTPQMKVAEVVEAAKRAKAAGSTRFCMGAAWRELGNKKNAFGHILDMVREVNGMGLEVCATLGMLNPEQARQLKAAGLTAYNHNLDTSPEYYPKVITTRSYEDRLNTLSAVRDAGLNVCSGGILGLGEADSDRIGLLHTLATLPAHPESVPINALVAVEGTPMQE---SHAPSIWDMGRMIATARIVMPKTMVRLSAGRLSFSKGEQALMFFAGANSIFNGDVLLTTPNPEFSADMDLFEKIGLVGKKAHVPAKETPYEV 401
            ETR M    A +RNDWT+ EI+ +Y+ P +ELLY+A+++HRM+++P EVQQCTLLSIKTGGCTEDC YCSQSVR+KT VKPTPQMK+ EV+ AAKRAK AGSTRFCMGAAWRELGNKK AF +ILDMVREVNGMG+EVC TLGMLN EQA+QLK AGLTAYNHNLDTS E+YP VITTRSYEDRL T+S VR+AG++VC GGILGLGE ++DR+GLLHTLATL  HPESVPINALVAVEGTP+ +   +  P IWDMGRMIATAR+VMP+TMVRLSAGRLSFS+ EQA+MF AGANSIF GD LLTT NPEF AD  LF K+GL GK AH    + P E+
Sbjct:   45 ETRSMNGIDATVRNDWTKEEIREVYEMPMLELLYRASSVHRMFFDPTEVQQCTLLSIKTGGCTEDCGYCSQSVRHKTFVKPTPQMKIDEVMAAAKRAKEAGSTRFCMGAAWRELGNKKKAFNNILDMVREVNGMGMEVCCTLGMLNGEQAKQLKEAGLTAYNHNLDTSREFYPSVITTRSYEDRLETISNVREAGISVCCGGILGLGEEENDRVGLLHTLATLEEHPESVPINALVAVEGTPLADEGKADTPDIWDMGRMIATARVVMPRTMVRLSAGRLSFSEAEQAMMFMAGANSIFTGDRLLTTSNPEFDADKALFAKLGLNGKPAHSAPLQPPMEM 384          
BLAST of NO30G00640 vs. NCBI_GenBank
Match: EJK70128.1 (hypothetical protein THAOC_08542 [Thalassiosira oceanica])

HSP 1 Score: 501.9 bits (1291), Expect = 2.000e-138
Identity = 251/348 (72.13%), Postives = 283/348 (81.32%), Query Frame = 0
Query:   64 ETRVMGNTRAVLRNDWTRAEIQALYDQPFIELLYQAATIHRMYWNPQEVQQCTLLSIKTGGCTEDCKYCSQSVRYKTHVKPTPQMKVAEVVEAAKRAKAAGSTRFCMGAAWRELGNKKNAFGHILDMVREVNGMGLEVCATLGMLNPEQARQLKAAGLTAYNHNLDTSPEYYPKVITTRSYEDRLNTLSAVRDAGLNVCSGGILGLGEADSDRIGLLHTLATLPAHPESVPINALVAVEGTPMQESHAP-----------SIWDMGRMIATARIVMPKTMVRLSAGRLSFSKGEQALMFFAGANSIFNGDVLLTTPNPEFSADMDLFEKIGLVGKKAHVPAKETPYEV 401
            E R MG   A +R+DWT+AEI  +Y  PF EL+Y+A+T+HRMYW+P EVQQCTLLSIKTGGCTEDC YCSQS R+KT VKPTP MKV EV+EAAKRAK AGSTRFCMGAAWRELGNKKNAF HIL+MVR VNGMGLEVC TLGMLN EQARQLK AGLTAYNHNLDTSPE+YP VITTR+YEDRL T++ VR+AG++VC GGILGLGE ++DR+GLLH LATLP HPESVPINALVAVEGTP+ ++ A              +DM RMIATARIVMP+TMVRLSAGRLSFS  EQ LMF AGANSIFNGD LLTT NP F +D  LF+K+G VGK AH   +  P E+
Sbjct:   82 EARSMGGVTATVRHDWTKAEIAEVYTLPFHELMYRASTVHRMYWDPSEVQQCTLLSIKTGGCTEDCSYCSQSTRHKTFVKPTPTMKVQEVLEAAKRAKDAGSTRFCMGAAWRELGNKKNAFNHILNMVRGVNGMGLEVCCTLGMLNAEQARQLKDAGLTAYNHNLDTSPEHYPNVITTRTYEDRLETIANVREAGISVCCGGILGLGEKETDRVGLLHVLATLPEHPESVPINALVAVEGTPLGDADADEGVDSDGIANVDSFDMARMIATARIVMPRTMVRLSAGRLSFSDAEQYLMFQAGANSIFNGDKLLTTDNPAFDSDTALFQKLGFVGKPAHAGPRVAPSEM 429          
BLAST of NO30G00640 vs. NCBI_GenBank
Match: XP_002181331.1 (biotin synthase [Phaeodactylum tricornutum CCAP 1055/1] >EEC47254.1 biotin synthase [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 500.0 bits (1286), Expect = 7.600e-138
Identity = 255/367 (69.48%), Postives = 290/367 (79.02%), Query Frame = 0
Query:   45 SSAIAAPAAAPIPTSAFQ-------SETRVMGNTRAVLRNDWTRAEIQALYDQPFIELLYQAATIHRMYWNPQEVQQCTLLSIKTGGCTEDCKYCSQSVRYKTHVKPTPQMKVAEVVEAAKRAKAAGSTRFCMGAAWRELGNKKNAFGHILDMVREVNGMGLEVCATLGMLNPEQARQLKAAGLTAYNHNLDTSPEYYPKVITTRSYEDRLNTLSAVRDAGLNVCSGGILGLGEADSDRIGLLHTLATLPAHPESVPINALVAVEGTPMQESHAPSIWD---MGRMIATARIVMPKTMVRLSAGRLSFSKGEQALMFFAGANSIFNGDVLLTTPNPEFSADMDLFEKIGLVGKKAHVPAKETPYEVQ 402
            +S + A  +  +P  +++        E R MG   A +R +WTR EI  ++ QPF EL+Y+A+T+HRMYW+P EVQQCTLLSIKTGGC+EDC YCSQS R+KT VKPTP MKV EV+EAA+RAK AGSTRFCMGAAWRELGNKKNAFGHIL+MVR VNGMGLEVC TLGMLN EQA+QLK AGL+AYNHNLDTSPE+YPKVI+TRSYEDRLNT++ VRDAG++VC GGILGLGE + DR+GLLH LATLP HPESVPINALVAVEGTP+ +S   S  D   M RMIATARIVMP+TMVRLSAGRLSFS  EQ LMF AGANSIFNGD LLTT NPEF  D  LF K G  GK AH   +  P E Q
Sbjct:   52 ASRVVAEESPRLPNDSYERNALYEAEEERSMGGVTASVRQNWTRDEIAEIFHQPFYELMYKASTVHRMYWDPSEVQQCTLLSIKTGGCSEDCSYCSQSTRHKTFVKPTPTMKVQEVLEAAQRAKEAGSTRFCMGAAWRELGNKKNAFGHILEMVRGVNGMGLEVCCTLGMLNAEQAKQLKEAGLSAYNHNLDTSPEHYPKVISTRSYEDRLNTIANVRDAGISVCCGGILGLGEEEKDRVGLLHVLATLPEHPESVPINALVAVEGTPLGDSEDISRVDAFAMARMIATARIVMPRTMVRLSAGRLSFSDAEQYLMFQAGANSIFNGDKLLTTANPEFDQDQALFRKFGFQGKPAHKGPRVAPAEEQ 418          
BLAST of NO30G00640 vs. NCBI_GenBank
Match: GAX21365.1 (biotin synthase [Fistulifera solaris])

HSP 1 Score: 495.7 bits (1275), Expect = 1.400e-136
Identity = 248/349 (71.06%), Postives = 282/349 (80.80%), Query Frame = 0
Query:   61 FQSE-TRVMGNTRAVLRNDWTRAEIQALYDQPFIELLYQAATIHRMYWNPQEVQQCTLLSIKTGGCTEDCKYCSQSVRYKTHVKPTPQMKVAEVVEAAKRAKAAGSTRFCMGAAWRELGNKKNAFGHILDMVREVNGMGLEVCATLGMLNPEQARQLKAAGLTAYNHNLDTSPEYYPKVITTRSYEDRLNTLSAVRDAGLNVCSGGILGLGEADSDRIGLLHTLATLPAHPESVPINALVAVEGTPMQESH---------APSIWDMGRMIATARIVMPKTMVRLSAGRLSFSKGEQALMFFAGANSIFNGDVLLTTPNPEFSADMDLFEKIGLVGKKAHVPAKETPYE 400
            +Q E  R +G+  A +R+DWT+ EI A+Y  PF EL+++A+ +HRMYWNP EVQQCTLLSIKTGGCTEDCKYCSQS RYKT VKPTP MKV EV++AA+RAK AGSTRFCMGAAWRELGNK+NAFGHIL+MV+ VN MGLEVC TLGML  EQARQLK AGLTAYNHNLDTSPE+YP VITTRSYEDRL T++ VRDAG++VC GGILGLGE ++DR+GLLH LATLP HPESVPINALVAV+GTP+ +           +  ++DM RMIATARIVMP+TMVRLSAGRLSFS  EQ LMF AGANSIFNGD LLTT NPEF AD  LF K+G  GK AH      P E
Sbjct:   67 YQDEAARTLGDVTASVRHDWTKDEIAAIYSLPFYELMHRASMVHRMYWNPAEVQQCTLLSIKTGGCTEDCKYCSQSTRYKTFVKPTPTMKVQEVLQAAQRAKDAGSTRFCMGAAWRELGNKQNAFGHILEMVKGVNAMGLEVCCTLGMLTAEQARQLKQAGLTAYNHNLDTSPEHYPNVITTRSYEDRLQTIANVRDAGISVCCGGILGLGEKETDRVGLLHVLATLPEHPESVPINALVAVQGTPLGDQQQEEDDDAMKSVDVFDMARMIATARIVMPRTMVRLSAGRLSFSDAEQFLMFQAGANSIFNGDKLLTTSNPEFDADQALFRKLGFQGKPAHQGPLVAPAE 415          
BLAST of NO30G00640 vs. NCBI_GenBank
Match: XP_002291078.1 (biotin synthase, BioB, partial [Thalassiosira pseudonana CCMP1335] >EED91185.1 biotin synthase, BioB, partial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 494.6 bits (1272), Expect = 3.200e-136
Identity = 247/330 (74.85%), Postives = 276/330 (83.64%), Query Frame = 0
Query:   68 MGNTRAVLRNDWTRAEIQALYDQPFIELLYQAATIHRMYWNPQEVQQCTLLSIKTGGCTEDCKYCSQSVRYKTHVKPTPQMKVAEVVEAAKRAKAAGSTRFCMGAAWRELGNKKNAFGHILDMVREVNGMGLEVCATLGMLNPEQARQLKAAGLTAYNHNLDTSPEYYPKVITTRSYEDRLNTLSAVRDAGLNVCSGGILGLGEADSDRIGLLHTLATLPAHPESVPINALVAVEGTPM------QESHAPSI-----WDMGRMIATARIVMPKTMVRLSAGRLSFSKGEQALMFFAGANSIFNGDVLLTTPNPEFSADMDLFEKIGLVG 387
            MG   A +R+DWT+ EI  +Y  PF EL+Y+A+T+HRMYW+P EVQQCTLLSIKTGGCTEDC YCSQS R+KT VKPTP MKV EV+EAAKRAK AGSTRFCMGAAWRELGNKKNAF HILDMV+ VNGMGLEVC TLGMLN EQARQLK AGLTAYNHNLDTSPE+YP VITTR+YEDRL T++ VR+AG++VC GGILGLGE ++DR+GLLH LATLP HPESVPINALVAVEGTP+      ++S A  I     +DM RMIATARIVMP+TMVRLSAGRLSFS  EQ LMF AGANSIFNGD LLTT NPEF  DM LF+K+G VG
Sbjct:    1 MGGVTATVRHDWTKDEIAEVYSLPFHELMYKASTVHRMYWDPSEVQQCTLLSIKTGGCTEDCSYCSQSTRHKTFVKPTPTMKVQEVLEAAKRAKDAGSTRFCMGAAWRELGNKKNAFNHILDMVKGVNGMGLEVCCTLGMLNAEQARQLKEAGLTAYNHNLDTSPEHYPNVITTRTYEDRLETIANVREAGISVCCGGILGLGEKEADRVGLLHVLATLPEHPESVPINALVAVEGTPLGNAAADEDSKADGIADVDAFDMARMIATARIVMPRTMVRLSAGRLSFSDAEQFLMFQAGANSIFNGDKLLTTDNPEFDQDMALFDKLGFVG 330          
BLAST of NO30G00640 vs. NCBI_GenBank
Match: GAX20224.1 (biotin synthase [Fistulifera solaris])

HSP 1 Score: 491.1 bits (1263), Expect = 3.600e-135
Identity = 247/354 (69.77%), Postives = 281/354 (79.38%), Query Frame = 0
Query:   61 FQSE-TRVMGNTRAVLRNDWTRAEIQALYDQPFIELLYQAATIHRMYWNPQEVQQCTLLSIKTGGCTEDCKYCSQSVRYKTHVKPTPQMKVAEVVEAAKRAKAAGSTRFCMGAAWRELGNKKNAFGHILDMVREVNGMGLEVCATLGMLNPEQARQLKAAGLTAYNHNLDTSPEYYPKVITTRSYEDRLNTLSAVRDAGLNVCSGGILGLGEADSDRIGLLHTLATLPAHPESVPINALVAVEGTPMQES--------------HAPSIWDMGRMIATARIVMPKTMVRLSAGRLSFSKGEQALMFFAGANSIFNGDVLLTTPNPEFSADMDLFEKIGLVGKKAHVPAKETPYE 400
            +Q E  R +G+  A +R+DWT+ EI A+Y  PF EL+++A+ +HRMYWNP EVQQCTLLSIKTGGCTEDCKYCSQS RYKT VKPTP MKV EV++AA+RAK AGSTRFCMGAAWRELGNK+NAF HIL+MVR VN MGLEVC TLGML  EQA+QLK AGLTAYNHNLDTSPE+YP VITTRSYEDRL T++ VRDAG++VC GGILGLGE ++DR+GLLH LATLP HPESVPINALVAV+GTP+ +                +  ++DM RMIATARIVMP+TMVRLSAGRLSFS  EQ LMF AGANSIFNGD LLTT NPEF AD  LF K+G  GK AH      P E
Sbjct:   79 YQDEVARTLGDVTASVRHDWTKDEIAAIYQLPFYELMHRASMVHRMYWNPSEVQQCTLLSIKTGGCTEDCKYCSQSTRYKTFVKPTPTMKVQEVLQAAQRAKDAGSTRFCMGAAWRELGNKQNAFAHILEMVRGVNAMGLEVCCTLGMLTAEQAQQLKQAGLTAYNHNLDTSPEHYPNVITTRSYEDRLQTIANVRDAGISVCCGGILGLGEKETDRVGLLHVLATLPEHPESVPINALVAVQGTPLGDQXXXXXXXXXXXXAMKSVDVFDMARMIATARIVMPRTMVRLSAGRLSFSDAEQFLMFQAGANSIFNGDKLLTTSNPEFDADQALFRKLGFQGKPAHQGPLVAPAE 432          
BLAST of NO30G00640 vs. NCBI_GenBank
Match: OEU15672.1 (biotin synthase [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 488.0 bits (1255), Expect = 3.000e-134
Identity = 252/372 (67.74%), Postives = 286/372 (76.88%), Query Frame = 0
Query:   40 VTVHHSSAIAAPAAAPIPTSAF-------QSETRVMGNTRAVLRNDWTRAEIQALYDQPFIELLYQAATIHRMYWNPQEVQQCTLLSIKTGGCTEDCKYCSQSVRYKTHVKPTPQMKVAEVVEAAKRAKAAGSTRFCMGAAWRELGNKKNAFGHILDMVREVNGMGLEVCATLGMLNPEQARQLKAAGLTAYNHNLDTSPEYYPKVITTRSYEDRLNTLSAVRDAGLNVCSGGILGLGEADSDRIGLLHTLATLPAHPESVPINALVAVEGTPMQESHAPSI-----WDMGRMIATARIVMPKTMVRLSAGRLSFSKGEQALMFFAGANSIFNGDVLLTTPNPEFSADMDLFEKIGLVGKKAHVPAKETPYE 400
            +T   +SAI+  A   +P  A          + R MG   A +R DWT+ EI  +Y  PF EL+Y+A+T+HRMYW+P EVQQCTLLSIKTGGCTEDC YCSQS R+KT VKPTP MKV EV+ AA+RAK AGSTRFCMGAAWRELGNKKNAF HILDMVR VNGMGLEVC TLGMLN EQARQL  AGL++YNHNLDTSPE+YPKVITTRSYEDRL T+S VRDAG+ VC GGILGLGEA++DR+GLLH LATLP HPESVPINALV+V GTP+ +S    I     +DM RMIATARIVMP+T+VRLSAGRLSFS  EQ LMF AGANSIFNGD LLTT NP+F  D ++F+  G  GK AH      P E
Sbjct:   60 MTGSSASAISNDAINRLPNDASDRNALYEDEDRREMGGITASVRTDWTKPEIAEIYSSPFHELMYRASTVHRMYWDPSEVQQCTLLSIKTGGCTEDCSYCSQSTRHKTFVKPTPTMKVQEVLAAAQRAKEAGSTRFCMGAAWRELGNKKNAFKHILDMVRGVNGMGLEVCCTLGMLNAEQARQLADAGLSSYNHNLDTSPEHYPKVITTRSYEDRLQTISNVRDAGIQVCCGGILGLGEAETDRVGLLHVLATLPYHPESVPINALVSVAGTPLGDSDDSDIGNVDAFDMARMIATARIVMPRTLVRLSAGRLSFSNAEQFLMFQAGANSIFNGDKLLTTDNPDFDDDQNMFKMFGFQGKPAHKGPLMAPAE 431          
BLAST of NO30G00640 vs. NCBI_GenBank
Match: GAX96046.1 (biotin synthase [Pythium insidiosum])

HSP 1 Score: 465.7 bits (1197), Expect = 1.600e-127
Identity = 237/375 (63.20%), Postives = 292/375 (77.87%), Query Frame = 0
Query:   41 TVHHSSAIAAPAAA-PIPTSAFQSETRVMGNTRAVLRNDWTRAEIQALYDQPFIELLYQAATIHRMYWNPQEVQQCTLLSIKTGGCTEDCKYCSQSVRYKTHVKPTPQMKVAEVVEAAKRAKAAGSTRFCMGAAWRELGNKKNAFGHILDMVREVNGMGLEVCATLGMLNPEQARQLKAAGLTAYNHNLDTSPEYYPKVITTRSYEDRLNTLSAVRDAGLNVCSGGILGLGEADSDRIGLLHTLATLPAHPESVPINALVAVEGTPMQESHAPSI--WDMGRMIATARIVMPKTMVRLSAGRLSFSKGEQALMFFAGANSIFNGDVLLTTPNPEFSADMDLFEKIGLVGKKAHVPAKETPYEVQRLQQEEAEAEA 413
            ++ H +A ++ AAA P P+    +   + G     +RNDWT  +++A++DQP +EL+Y+AAT+HRM+++P+EVQQCTLLSIKTGGCTEDCKYCSQSVR+KT VKP P  KV EVVE A+RAKAAGSTRFCMG+AWRE+G KKNAF HIL MVRE+  M LEVC TLGML  EQA QLK AGL+AYNHNLDTS E+Y K+ITTR+Y+DRL T+  VR AG++VC GGILG+GE + DR+ LLHTLAT+  HPESVP+NALV+V+GTP+ E   P +  +DM R IATARI+MPKTMVRLSAGR+SFS  EQ L+F AGANSIFNGD LLTT NP F  D  +F+++GL+GK AH P ++TPY VQ    E A   A
Sbjct:   14 SLRHRAAFSSIAAAQPSPSGVTLTVPDITGE----VRNDWTYEQVKAIFDQPLLELVYKAATVHRMHFDPREVQQCTLLSIKTGGCTEDCKYCSQSVRHKTFVKPEPTKKVQEVVEMARRAKAAGSTRFCMGSAWREVG-KKNAFKHILTMVREIRAMDLEVCCTLGMLTEEQAVQLKEAGLSAYNHNLDTSREHYAKIITTRTYDDRLKTIDNVRKAGISVCCGGILGVGEKEHDRVALLHTLATMEEHPESVPVNALVSVQGTPLGEEELPPVTAFDMARAIATARILMPKTMVRLSAGRMSFSDAEQGLLFMAGANSIFNGDKLLTTANPAFDEDKQMFDRMGLLGKPAHQPHRQTPYIVQVTHSEPARHAA 383          
BLAST of NO30G00640 vs. NCBI_GenBank
Match: ETK88376.1 (biotin synthase [Phytophthora parasitica] >ETL41774.1 biotin synthase [Phytophthora parasitica] >ETL94931.1 biotin synthase [Phytophthora parasitica] >ETM48168.1 biotin synthase [Phytophthora parasitica] >ETO77232.1 biotin synthase [Phytophthora parasitica P1976] >ETP18228.1 biotin synthase [Phytophthora parasitica CJ01A1])

HSP 1 Score: 461.1 bits (1185), Expect = 3.900e-126
Identity = 233/340 (68.53%), Postives = 271/340 (79.71%), Query Frame = 0
Query:   75 LRNDWTRAEIQALYDQPFIELLYQAATIHRMYWNPQEVQQCTLLSIKTGGCTEDCKYCSQSVRYKTHVKPTPQMKVAEVVEAAKRAKAAGSTRFCMGAAWRELGNKKNAFGHILDMVREVNGMGLEVCATLGMLNPEQARQLKAAGLTAYNHNLDTSPEYYPKVITTRSYEDRLNTLSAVRDAGLNVCSGGILGLGEADSDRIGLLHTLATLPAHPESVPINALVAVEGTPMQESHAPSIW--DMGRMIATARIVMPKTMVRLSAGRLSFSKGEQALMFFAGANSIFNGDVLLTTPNPEFSADMDLFEKIGLVGKKAHVPAKETPYEVQRLQQEEAEAEA 413
            +R+DWT+ E+QA+YDQP +EL+Y+AAT+HRM+++P EVQQCTLLSIKTGGCTEDCKYCSQS R+KT VKP P  KV EVVE A+RAKAAGSTRFCMG+AWRE+G KKNAF HILDMVR+V  + LEVC TLGML  EQA QLK AGL+AYNHNLDTS E+Y KVITTR+Y+DRL T+  VR AG++VC GGILGLGE   DR+GLLHTLAT+  HPESVP+NALV+VEGTP+ +   P +   DM RMIATARI+MPKTMVRLSAGR+SF+  EQ +MF AGANSIFNGD LLTT NP F  D  LFE  GL GK A+   K TPY V+      A  EA
Sbjct:   37 VRHDWTKEEVQAIYDQPLLELVYKAATVHRMHFDPTEVQQCTLLSIKTGGCTEDCKYCSQSSRHKTFVKPEPTKKVQEVVEMARRAKAAGSTRFCMGSAWREVG-KKNAFRHILDMVRQVKDLDLEVCCTLGMLTEEQAVQLKEAGLSAYNHNLDTSREHYAKVITTRTYDDRLKTIENVRKAGISVCCGGILGLGEEKIDRVGLLHTLATMDEHPESVPVNALVSVEGTPLFDEDIPPVTASDMARMIATARILMPKTMVRLSAGRMSFTDAEQGMMFMAGANSIFNGDTLLTTANPAFEKDKRLFESFGLKGKPAYHQHKSTPYIVKVTHSASAATEA 375          
BLAST of NO30G00640 vs. NCBI_GenBank
Match: XP_008904154.1 (biotin synthase [Phytophthora parasitica INRA-310] >ETI48436.1 biotin synthase [Phytophthora parasitica P1569] >ETN10393.1 biotin synthase [Phytophthora parasitica INRA-310] >ETP46172.1 biotin synthase [Phytophthora parasitica P10297] >KUF96311.1 hypothetical protein AM588_10009457 [Phytophthora nicotianae] >KUG00815.1 Biotin synthase [Phytophthora nicotianae])

HSP 1 Score: 460.7 bits (1184), Expect = 5.100e-126
Identity = 233/340 (68.53%), Postives = 271/340 (79.71%), Query Frame = 0
Query:   75 LRNDWTRAEIQALYDQPFIELLYQAATIHRMYWNPQEVQQCTLLSIKTGGCTEDCKYCSQSVRYKTHVKPTPQMKVAEVVEAAKRAKAAGSTRFCMGAAWRELGNKKNAFGHILDMVREVNGMGLEVCATLGMLNPEQARQLKAAGLTAYNHNLDTSPEYYPKVITTRSYEDRLNTLSAVRDAGLNVCSGGILGLGEADSDRIGLLHTLATLPAHPESVPINALVAVEGTPMQESHAPSIW--DMGRMIATARIVMPKTMVRLSAGRLSFSKGEQALMFFAGANSIFNGDVLLTTPNPEFSADMDLFEKIGLVGKKAHVPAKETPYEVQRLQQEEAEAEA 413
            +R+DWT+ E+QA+YDQP +EL+Y+AAT+HRM+++P EVQQCTLLSIKTGGCTEDCKYCSQS R+KT VKP P  KV EVVE A+RAKAAGSTRFCMG+AWRE+G KKNAF HILDMVR+V  + LEVC TLGML  EQA QLK AGL+AYNHNLDTS E+Y KVITTR+Y+DRL T+  VR AG++VC GGILGLGE   DR+GLLHTLAT+  HPESVP+NALV+VEGTP+ +   P +   DM RMIATARI+MPKTMVRLSAGR+SF+  EQ +MF AGANSIFNGD LLTT NP F  D  LFE  GL GK A+   K TPY V+      A  EA
Sbjct:   37 VRHDWTKEEVQAIYDQPLLELVYKAATVHRMHFDPTEVQQCTLLSIKTGGCTEDCKYCSQSSRHKTFVKPEPTKKVQEVVEMARRAKAAGSTRFCMGSAWREVG-KKNAFRHILDMVRQVKDLDLEVCCTLGMLTEEQAVQLKEAGLSAYNHNLDTSREHYAKVITTRTYDDRLKTIENVRKAGISVCCGGILGLGEEKIDRVGLLHTLATMDEHPESVPVNALVSVEGTPLFDEDIPPVTASDMARMIATARILMPKTMVRLSAGRMSFTDAEQGMMFMAGANSIFNGDTLLTTANPAFEKDKRLFESFGLKGKPAYHQHKSTPYIVKVTHSAPAATEA 375          
The following BLAST results are available for this feature:
BLAST of NO30G00640 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
CBN74306.14.800e-14073.53biotin synthase [Ectocarpus siliculosus][more]
EJK70128.12.000e-13872.13hypothetical protein THAOC_08542 [Thalassiosira oc... [more]
XP_002181331.17.600e-13869.48biotin synthase [Phaeodactylum tricornutum CCAP 10... [more]
GAX21365.11.400e-13671.06biotin synthase [Fistulifera solaris][more]
XP_002291078.13.200e-13674.85biotin synthase, BioB, partial [Thalassiosira pseu... [more]
GAX20224.13.600e-13569.77biotin synthase [Fistulifera solaris][more]
OEU15672.13.000e-13467.74biotin synthase [Fragilariopsis cylindrus CCMP1102... [more]
GAX96046.11.600e-12763.20biotin synthase [Pythium insidiosum][more]
ETK88376.13.900e-12668.53biotin synthase [Phytophthora parasitica] >ETL4177... [more]
XP_008904154.15.100e-12668.53biotin synthase [Phytophthora parasitica INRA-310]... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR051ncniR051Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR102ngnoR102Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO30G00640.1NO30G00640.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|605863gene_9250Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_101288g2gene9806Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO30G00640.1NO30G00640.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO30G00640 ID=NO30G00640|Name=NO30G00640|organism=Nannochloropsis oceanica|type=gene|length=2139bp
ATGATGATGCGTCGTCTTGTCACTGCCACCGGCCGAATCAGAACCAGTAG
AGCGGGACGAATTGCAGTCACGCGCCGTACCCTGTCCGTTCAGCCTTTGG
AAGAGGAGTCTACGCCTGTGACAGTCCACCACTCCTCTGCCATCGCTGCT
CCTGCGGCTGCTCCTATCCCTACCTCTGCCTTCCAAAGCGAGACCCGCGT
TATGGGCAACACTCGAGCAGTCCTTCGCAATgtacgtttgaatagactgg
cgaggttctcatctcatattttctttctcatagatttacaatcgcttctt
ttcccccttcctccactccctcccttaatatcagGACTGGACTCGCGCGG
AGATCCAGGCCCTGTACGACCAGCCATTCATCGAGCTCCTCTATCAAGCC
GCAACCATCCATCGCATGTACTGGAACCCCCAAGAAGTCCAGCAGTGCAC
CCTCCTCTCCATCAAGACCGGCGGCTGCACCGAAGACTGCAAATACTGCT
CCCAGTCCGTGCGCTACAAGACACACGTCAAACCCACCCCTCAGgtacac
gccacgccctccctcccccctctgtttccttaattggctcttcgggtaca
tgccctcccttcctccctctgttcgttttaatcaccccttaggtgcacgc
cctctccccctccctctatctgtcttttcctctcgtgcctgcatggcgtc
cagctcctaaatcccgtcaagttcaacccctcctgcttcctttccatcct
tctctccctccctcctctcagATGAAGGTGGCTGAAGTCGTGGAGGCTGC
CAAGCGAGCCAAGGCCGCGGGGAGCACCCGGTTCTGCATGGGGGCAGCAT
GGCGGGAGCTGGGGAATAAGAAGAATGCCTTTGGGCACATTTTGGATATG
GTTCGCGAGgtaaggggatgaaaagggacgatgtgaggagtcggatggtg
ggtccagggtgtctcactggcggactcggcgaggagctggaggcggtgga
tagggaggaggagagggagggagggagggagggagggagggagggaggga
aagaggtgggtacctaatcgagagagattgtgtgaatcgtgtgttcattg
tctcctgtgtctcgcatggattgacagGTGAACGGCATGGGCCTCGAAGT
GTGCGCCACCCTAGGGATGCTGAACCCCGAGCAAGCCCGGCAGCTCAAGG
CCGCGGGTCTGACGGCCTACAACCACAACCTGGACACTTCGCCTGAGTAC
TACCCCAAGGTCATCACCACCAGgtgggggggggagggagggaggggtag
gaaggagggaggggtggagggagggggggaagggagggcaatggaaccgc
tgctgggacacaatctgatctgtcgggcgccacgttgtgaatgacgcata
acccgaatgttcaaccccggagccatcaaaccatcttcggcagcgaataa
caataacaataacgatcttctctctacatcttaatcgaataacaataaca
aaaacgattcttctcccttccacccttattaccacgccctccagGTCTTA
CGAGGACCGCCTCAATACTCTCTCGGCCGTGCGTGACGCCGGTCTCAACG
TCTGCTCCGGGGGCATCCTGGGGCTCGGAGAGGCGGACAGCGACCGCATC
GGCCTCTTGCATACCCTCGCCACCCTCCCCGCGCACCCGGAATCGGTGCC
CATCAACGCATTGGTGGCCGTGGAAGGCACGCCCATGCAGGAGAGCCACG
CGCCCTCGATCTGGGACATGGGCCGCATGATTGCTACGGCGCGCATCGTC
ATGCCCAAGACGATGGTGCGTCTCTCGGCCGGACGCTTGTCCTTCAGCAA
GGGCGAGCAGGCGCTCATGTTTTTTGCAGGCGCAAACTCGATTTTCAATG
GTGACGTGTTATTGACGACCCCGAACCCAGAGTTTAGTGCCGATATGGAT
CTGTTTGAGAAGATCGGATTGGTGGGGAAGAAGGCCCATGTCCCTGCCAA
GGAAACGCCCTATGAAGTGCAAAGACTTCAGCAGGAGGAAGCCGAAGCTG
AGGCGAACACGGAAGTAAAGTGGATGGAGGAGGAGGGTGGGAGGGATGGA
GGAGTGGTGGTCACGAGGAGTCGAGCTCAGATGGCGTAG
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protein sequence of NO30G00640.1

>NO30G00640.1-protein ID=NO30G00640.1-protein|Name=NO30G00640.1|organism=Nannochloropsis oceanica|type=polypeptide|length=440bp
MMMRRLVTATGRIRTSRAGRIAVTRRTLSVQPLEEESTPVTVHHSSAIAA
PAAAPIPTSAFQSETRVMGNTRAVLRNDWTRAEIQALYDQPFIELLYQAA
TIHRMYWNPQEVQQCTLLSIKTGGCTEDCKYCSQSVRYKTHVKPTPQMKV
AEVVEAAKRAKAAGSTRFCMGAAWRELGNKKNAFGHILDMVREVNGMGLE
VCATLGMLNPEQARQLKAAGLTAYNHNLDTSPEYYPKVITTRSYEDRLNT
LSAVRDAGLNVCSGGILGLGEADSDRIGLLHTLATLPAHPESVPINALVA
VEGTPMQESHAPSIWDMGRMIATARIVMPKTMVRLSAGRLSFSKGEQALM
FFAGANSIFNGDVLLTTPNPEFSADMDLFEKIGLVGKKAHVPAKETPYEV
QRLQQEEAEAEANTEVKWMEEEGGRDGGVVVTRSRAQMA*
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Synonyms
Publications