NO30G00590, NO30G00590 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO30G00590 vs. NCBI_GenBank
Match: XP_004333488.1 (Short chain oxidoreductase [Acanthamoeba castellanii str. Neff] >ELR11475.1 Short chain oxidoreductase [Acanthamoeba castellanii str. Neff]) HSP 1 Score: 128.6 bits (322), Expect = 2.700e-26 Identity = 87/257 (33.85%), Postives = 139/257 (54.09%), Query Frame = 0 Query: 13 RIALVTGADHGLGLEYCKQLSNQGYLVVGTAKDAVNATELNDL--ARESQNKVFVQQLDQTKVDEIKNLTEALRTRN-----YRLDLLILNAGVAEKEHPNVNASQLEHKELMDMFEVNVCGTASVIKHMLPLVLESHEK--------KVIGVTTNMA--SLEEATADKPYISAGYRITKAAENMLFRVWSCDPAAKDVTFLLVHPGHVKTQMGEAGGRKAPMTAEEGVQQSLSNVILRCGKQDSGHFFNYDGTEIS 253 + ALVTGA G+GL+ K+L +GY VV T + +T L DL R+ + V LD V + +++T AL T LD+LI NAGVA +HP+ + +++ +F NV G V + PL+L S KV+ V++ M SL + + SA YR++KAA NML + ++ + A + + +HPG V+T++G + GRK P+T E+ + + +V+ K D+G FFN+DG +++ Sbjct: 12 KTALVTGASRGIGLQLVKELLGEGYAVVATCRAPATSTGLQDLLHTRQRGRLLGVVPLD---VSDGRSVTAALATVTGELGLTSLDVLINNAGVATAKHPDEPVLEATAEDMQSVFTTNVVGPMLVTQTFYPLLLASSSSSSLASALPKVVNVSSRMGSISLYQDISRGGATSASYRVSKAALNMLTKCFAVE-HADECIHIAIHPGWVQTELGSSHGRKPPVTPEQSA-KGIVSVLQGLKKDDNGSFFNFDGQQLA 263
BLAST of NO30G00590 vs. NCBI_GenBank
Match: KRP06958.1 (hypothetical protein ABR94_09135, partial [Sphingobacteriales bacterium BACL12 MAG-120802-bin5]) HSP 1 Score: 128.6 bits (322), Expect = 2.700e-26 Identity = 78/245 (31.84%), Postives = 127/245 (51.84%), Query Frame = 0 Query: 13 RIALVTGADHGLGLEYCKQLSNQGYLVVGTAKDAVNATELNDLARESQNKVFVQQLDQTKVDEIKNLTEALRTRNYRLDLLILNAGVAEKEHP-------NVNASQLEHKELMDMFEVNVCGTASVIKHMLPLVLESHEKKVIGVTTNMASLEEATADKPYISAGYRITKAAENMLFRVWSCDPAAKDVTFLLVHPGHVKTQMGEAGGRKAPMTAEEGVQQSLSNVILRCGKQDSGHFFNYDGTE 251 +IALVTGA GLG E C QL+ +GY V+ TA+ A ++ R+ V + LD + EI+ L E + LDLL+ NAG+ K++P N L+ +++++ +N ++KH L+ S V+ + + + S+ + Y Y +K+A NM+ + + + + + ++V+PG V+T M GG KAP+T EE V ++NVI R D+G F +DGTE Sbjct: 2 KIALVTGAYKGLGKEICLQLAEEGYTVILTARSMEKAEAAAEVLRQDHGHVLARTLDVSNEQEIQQLAEWVEAEFGHLDLLVNNAGINSKDNPDKEVFMKNFRLDMLDAEQVLEHIRINSIAPILMVKHFRQLLRRSSRPVVVSIGSWLGSVSVKNSGGHY---SYATSKSALNMMNKAMALELKEEGIIAVVVNPGWVQTDM---GGSKAPLTPEESVNGIVNNVIKRVKIADTGKFLQWDGTE 240
BLAST of NO30G00590 vs. NCBI_GenBank
Match: KRP13307.1 (hypothetical protein ABR95_04990 [Sphingobacteriales bacterium BACL12 MAG-120813-bin55]) HSP 1 Score: 128.6 bits (322), Expect = 2.700e-26 Identity = 78/245 (31.84%), Postives = 127/245 (51.84%), Query Frame = 0 Query: 13 RIALVTGADHGLGLEYCKQLSNQGYLVVGTAKDAVNATELNDLARESQNKVFVQQLDQTKVDEIKNLTEALRTRNYRLDLLILNAGVAEKEHP-------NVNASQLEHKELMDMFEVNVCGTASVIKHMLPLVLESHEKKVIGVTTNMASLEEATADKPYISAGYRITKAAENMLFRVWSCDPAAKDVTFLLVHPGHVKTQMGEAGGRKAPMTAEEGVQQSLSNVILRCGKQDSGHFFNYDGTE 251 +IALVTGA GLG E C QL+ +GY V+ TA+ A ++ R+ V + LD + EI+ L E + LDLL+ NAG+ K++P N L+ +++++ +N ++KH L+ S V+ + + + S+ + Y Y +K+A NM+ + + + + + ++V+PG V+T M GG KAP+T EE V ++NVI R D+G F +DGTE Sbjct: 2 KIALVTGAYKGLGKEICLQLAEEGYTVILTARSMEKAEAAAEVLRQDHGHVLARTLDVSNEQEIQQLAEWVEAEFGHLDLLVNNAGINSKDNPDKEVFMKNFRLDMLDAEQVLEHIRINSIAPILMVKHFRQLLRRSSRPVVVSIGSWLGSVSVKNSGGHY---SYATSKSALNMMNKAMALELKEEGIIAVVVNPGWVQTDM---GGSKAPLTPEESVNGIVNNVIKRVKIADTGKFLQWDGTE 240
BLAST of NO30G00590 vs. NCBI_GenBank
Match: WP_096526283.1 (KR domain-containing protein [Candidatus Nitrosoglobus terrae] >BAW79654.1 short-chain dehydrogenase/reductase SDR [Candidatus Nitrosoglobus terrae]) HSP 1 Score: 127.9 bits (320), Expect = 4.600e-26 Identity = 79/236 (33.47%), Postives = 128/236 (54.24%), Query Frame = 0 Query: 16 LVTGADHGLGLEYCKQLSNQGYLVVGTAKDAVNATELNDLARESQNKVFVQQLDQTKVDEIKNLTEALRTRNYRLDLLILNAGVAEKEHPNVNASQLEHKELMDMFEVNVCGTASVIKHMLPLVLESHEKKVIGVTTNMASLEEATADKPYISAGYRITKAAENMLFRVWSCDPAAKDVTFLLVHPGHVKTQMGEAGGRKAPMTAEEGVQQSLSNVILRCGKQDSGHFFNYDGTEI 252 L+TGA+ G+GLE+ KQ + G+ V+ + A LN LA + + LD TK D+I+ L A++ N ++DLL+ NAG+ + N+ ++++ + F VN + + + V S +KKVI +T+ M S+ + T+ Y+ YR +K A NM+ + S D ++ +T ++HPG V+T M GG A +T ++ V + VI DSG F+NYDG EI Sbjct: 5 LITGANRGIGLEFAKQYAETGWQVLACCRHPDKAETLNKLASQHTGLFNIYALDITKFDQIEKL--AIKLANQKIDLLLNNAGI-YSDTGNIGFGTIDYEAWIKAFMVNSMAPLKITEAFINQVANSQQKKVINITSKMGSIADNTSGGSYL---YRSSKTALNMIVKNLSIDLMSRKITTAVLHPGWVQTDM---GGPNALITVQQSV-TGMRQVIEGLTLADSGKFYNYDGKEI 230
BLAST of NO30G00590 vs. NCBI_GenBank
Match: WP_067547887.1 (KR domain-containing protein [Algoriphagus sp. M8-2] >AMQ57162.1 hypothetical protein AO498_12005 [Algoriphagus sp. M8-2]) HSP 1 Score: 126.7 bits (317), Expect = 1.000e-25 Identity = 74/244 (30.33%), Postives = 136/244 (55.74%), Query Frame = 0 Query: 13 RIALVTGADHGLGLEYCKQLSNQGYLVVGTAKDAVNATELNDLARESQNKVFVQQLDQTKVDEIKNLTEALRTRNYRLDLLILNAGVAEKEHPN-------VNASQLEHKELMDMFEVNVCGTASVIKHMLPLVLESHEKKVIGVTTNMASLEEATADKPYISAGYRITKAAENMLFRVWSCDPAAKDVTFLLVHPGHVKTQMGEAGGRKAPMTAEEGVQQSLSNVILRCGKQDSGHFFNYDGT 250 ++ALVTGA GLGLE+C QL +GY V+ TA++ A + ++ + LD EI++L R+DL++ NAG+ K++ + N SQL+++E++ + ++N ++KH LPL+ +S + V+ +++ ++S+ + + Y GY +K N+L + + + + + + V+PG VKTQM GG+KA T EE V+ + N++ + +++G F N+DG+ Sbjct: 2 KVALVTGAAKGLGLEWCHQLGLKGYKVILTARNFEQAQLAASELNQQDLVIYPKALDVANESEIEDLASWATELFGRVDLIVNNAGINPKDYADKSRMAKAFNLSQLDYQEMLQVIQINSLAPLMMVKHFLPLLKKSEKPLVVNISSWLSSVSQLSFGGHY---GYVGSKNLLNVLNKSMALELKNEGIICVNVNPGWVKTQM---GGQKATFTTEESVKNLIKNIVEKVSLEETGSFLNFDGS 239
BLAST of NO30G00590 vs. NCBI_GenBank
Match: KWU45291.1 (NAD(P)-binding protein [Rhodotorula sp. JG-1b]) HSP 1 Score: 126.3 bits (316), Expect = 1.300e-25 Identity = 82/253 (32.41%), Postives = 135/253 (53.36%), Query Frame = 0 Query: 8 MQPDTRIALVTGADHGLGLEYCKQLSNQ-GYLVVGTAKDAVNATELNDLARESQNKVFVQQLDQTKVDEIKNLTEALRTRNYRLDLLILNAGVAEKEHPNVNASQLEHKELMDMFEVNVCGTASVIKHMLPLVLESHEKKVIGVTTNMASLE---EATADKPYISAGYRITKAAENMLF-RVWSCDPAAKDVTFLLVHPGHVKTQMGEAGGR-----KAPMTAEEGVQQSLSNVILRCGKQDSGHFFNYDGTE 251 M + VTGA+ G+G +QL+ + L+ A+D A LN LA+E Q K+ V +LD T ++ K E ++ + ++D+LI NAG+ + A +L+ E+ + +VNV G + K + PL+L S +VIGV++ + S+ +A PY + Y ++K A NMLF R+ + + ++T +V PGH +T MG AG + KAP+ + ++ L + G Q +G F +YDG E Sbjct: 1 MSSSPLVYFVTGANRGIGFALVEQLATRDNVLIFAGARDPSKADRLNQLAQEQQGKIVVVKLDATSEEDAKKAAETVKEKVSKVDVLIANAGIG---NGTGAAHELDLAEMHSVIDVNVGGPLRIYKALYPLLLASSAPRVIGVSSTLGSIAFNLDADQIGPYKAGSYSVSKTALNMLFARIHTENHKDHNMTAFVVCPGHTQTDMGNAGAQNFGLEKAPVKLADSIKGLLELIDDETG-QYAGRFMSYDGAE 249
BLAST of NO30G00590 vs. NCBI_GenBank
Match: WP_078061514.1 (KR domain-containing protein [Legionella saoudiensis]) HSP 1 Score: 124.0 bits (310), Expect = 6.600e-25 Identity = 76/242 (31.40%), Postives = 124/242 (51.24%), Query Frame = 0 Query: 7 TMQPDTRIALVTGADHGLGLEYCKQLSNQGYLVVGTAKDAVNATELNDLARESQNKVFVQQLDQTKVDEIKNLTEALRTRNYRLDLLILNAGVAEKEHPNVNASQLEHKELMDMFEVNVCGTASVIKHMLPLVLESHEKKVIGVTTNMASLEEATADKPYISAGYRITKAAENMLFRVWSCDPAAKDVTFLLVHPGHVKTQMGEAGGRKAPMTAEEGVQQSLSNVILRCGKQDSGHFFNYDG 249 +M+ + AL+TGA+ G+GLE+ +QL +GY ++G ++ NA ELN LA + V +L+ T D+I L + L R +DLL+ NAG+ ++ V ++ + +F VN + +LP + S EK ++ +++ M S+ + + + Y YR +KAA N R ++ D K V +L+HPG VKT + GG A M A V L V L + + +DG Sbjct: 37 SMEVPMKSALITGANRGIGLEFVRQLKKKGYYIIGCCRNPANAQELNRLADK------VVRLEVTSDDDIAALQQTLNHR--PIDLLVNNAGITGEQ--GVTVGNVDRDNFLKVFNVNCVSVVKLSDALLPNIQASQEKNILVISSQMGSISDNDSGRSY---AYRTSKAAVNCAMRSFAVDVKDKGVHVMLIHPGWVKTDL---GGENALMDAHASVAAMLKQVELHMAHSHAEKLYRFDG 262
BLAST of NO30G00590 vs. NCBI_GenBank
Match: KWU45293.1 (NAD(P)-binding protein [Rhodotorula sp. JG-1b]) HSP 1 Score: 123.6 bits (309), Expect = 8.600e-25 Identity = 83/247 (33.60%), Postives = 131/247 (53.04%), Query Frame = 0 Query: 14 IALVTGADHGLGLEYCKQL-SNQGYLVVGTAKDAVNATELNDLARESQNKVFVQQLDQTKVDEIKNLTEALRTRNYRLDLLILNAGVAEKEHPNVNASQLEHKELMDMFEVNVCGTASVIKHMLPLVLESHEKKVIGVTTNMASL---EEATADKPYISAGYRITKAAENMLF-RVWSCDPAAKDVTFLLVHPGHVKTQMGEAGGR-----KAPMTAEEGVQQSLSNVILRCGKQDSGHFFNYDGTE 251 + VTGA+ G+G +QL S L+ A+D A LN LA+E Q K+ V +LD T ++ K E ++ + ++D+LI NAG+A + + +A +L+ E+ + +VNV G V K + L+L S +VI V++ + S+ + PY Y I+K A NML R+ S + ++T +V PGH +T MG AG R +AP+ + V+ L + G Q +G F +YDG E Sbjct: 7 VYFVTGANRGIGFALVEQLASRDNVLIFAGARDPSKADRLNQLAQEKQGKIVVVKLDVTSEEDAKKAAETVKEKVSKVDVLIANAGIA---NGSGSAHELDLAEMQSVIDVNVGGPLRVYKALYSLLLASPAPRVIAVSSTLGSIAFNTDLAHPVPYEGGSYSISKTALNMLLGRIHSENHKTHNMTAFVVCPGHTQTDMGNAGARAFGLEEAPVKVADSVKGLLKFIDDETG-QYAGRFMSYDGAE 249
BLAST of NO30G00590 vs. NCBI_GenBank
Match: WP_090415614.1 (KR domain-containing protein [Nitrosomonas halophila] >SDY88031.1 NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family [Nitrosomonas halophila]) HSP 1 Score: 123.6 bits (309), Expect = 8.600e-25 Identity = 81/236 (34.32%), Postives = 125/236 (52.97%), Query Frame = 0 Query: 16 LVTGADHGLGLEYCKQLSNQGYLVVGTAKDAVNATELNDLARESQNKVFVQQLDQTKVDEIKNLTEALRTRNYRLDLLILNAGVAEKEHPNVNASQLEHKELMDMFEVNVCGTASVIKHMLPLVLESHEKKVIGVTTNMASLEEATADKPYISAGYRITKAAENMLFRVWSCDPAAKDVTFLLVHPGHVKTQMGEAGGRKAPMTAEEGVQQSLSNVILRCGKQDSGHFFNYDGTEI 252 L+TG++ GLGLE+C+Q + G+ V + + A L LA E V + +LD T+ D+I L AL Y +DLLI NAGV +++ +++ F VN G V + +LP + S ++ + +T++M S+ E Y YR +KAA N + +S + A ++ LL+HPG V+T+MG G +P + EG++ + L DSG FF YDGTEI Sbjct: 6 LITGSNRGLGLEWCRQYAKAGWRVFASCRFPEQADALQQLAAE-YGTVVMHRLDVTEPDQINALAGAL--AEYPIDLLINNAGVYYEKYDR-PGQPIDYAAWTHTFRVNTMGAMRVSQALLPHIRRSQKRLIAVITSHMGSIAEIERPGSYY---YRSSKAALNAAMKGFSLELGALEIGVLLLHPGWVRTRMGGPDGLLSPQESIEGMRARVEAFTL----ADSGRFFRYDGTEI 230
BLAST of NO30G00590 vs. NCBI_GenBank
Match: KPK30232.1 (short-chain dehydrogenase [Nitrospira bacterium SG8_3]) HSP 1 Score: 123.2 bits (308), Expect = 1.100e-24 Identity = 80/236 (33.90%), Postives = 126/236 (53.39%), Query Frame = 0 Query: 16 LVTGADHGLGLEYCKQLSNQGYLVVGTAKDAVNATELNDLARESQNKVFVQQLDQTKVDEIKNLTEALRTRNYRLDLLILNAGVAEKEHPNVNASQLEHKELMDMFEVNVCGTASVIKHMLPLVLESHEKKVIGVTTNMASLEEATADKPYISAGYRITKAAENMLFRVWSCDPAAKDVTFLLVHPGHVKTQMGEAGGRKAPMTAEEGVQQSLSNVILRCGKQDSGHFFNYDGTEI 252 LVTG + GLGLE+ +Q + +G+ V T + + A EL +LA E + + V +LD +K DEI L A+ +DLL+ NAGV ++ V +L +++ + F+VN G V + V S + V+ ++T+MAS+ + A Y YR TKAA N + + + K V L++HPG V+T+MG G P + +G++ + L +SG FF YDG E+ Sbjct: 5 LVTGGNRGLGLEWVRQYATEGWRVYATCRHPMEARELKELA-EQEKGISVHRLDVSKPDEINAL--AVDLMKEPIDLLVNNAGVYLEKFMEVGLRKLRYEDWIYTFQVNTLGAVRVTEAFQEHVARSERRLVVVISTHMASIADIAAPGAYY---YRSTKAALNAVMEGLTHELRPKGVGVLILHPGWVQTRMGGEGTSLMPPESVQGMRSLVEKFTL----SESGRFFRYDGVEM 230 The following BLAST results are available for this feature:
BLAST of NO30G00590 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO30G00590 ID=NO30G00590|Name=NO30G00590|organism=Nannochloropsis oceanica|type=gene|length=3529bpback to top protein sequence of NO30G00590.1 >NO30G00590.1-protein ID=NO30G00590.1-protein|Name=NO30G00590.1|organism=Nannochloropsis oceanica|type=polypeptide|length=254bpback to top Synonyms
Publications
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