NO30G00490, NO30G00490 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO30G00490 vs. NCBI_GenBank
Match: OQR94512.1 (hypothetical protein ACHHYP_01225 [Achlya hypogyna]) HSP 1 Score: 105.9 bits (263), Expect = 2.700e-19 Identity = 105/366 (28.69%), Postives = 151/366 (41.26%), Query Frame = 0
Query: 3 SLEELQAALATYKTQTDQVQSLLDLDPSNEAYLTLKSDLQAAIKLTHDLIRTQEDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKGGEAGWVP-AVGERVDAPWGTGEKRFPAVVVAVEKGGEIVTLKYYGYAETEVKPTSDVRLLTPPGGSATLPPGVATVGWKGEAVWVGDGQWYEAQVLGLVEHGYRIKFVKYGNEGEVPLEFLREKSSSSSGAYAGGGEAGNEGVPKRGREAKEV---KEFVIPDALRLLPTDSEEEKARKRRKVKHLKGLWKQRTRGGXXXEDEVEETRSWQAYLAK--SKRPKLGMGALKKGSIFKSPEAVDGKVGVMGSGAGMTDF--AKRAFK 361
S+ ELQ L T+ Q + ++ LL DP+NE L + DL+ IKLT D++ ++ EA P +G ++A PAVV + G + L G+ + + T D GG + + VG+ +A + D +Y ++ L EHG I F YGN EVP +L PK A++V K IP L +LPTDSE EK RKRR++K +K L +Q+T + + W + K KR M ++KK SIF SP VDG+VGV+GS MT F ++ FK
Sbjct: 9 SVAELQERLVTFNGQLETIELLLKSDPANEELLGIAGDLKEVIKLTSDMLAHKQPQ----------------------------------------------EAALSPFPIGSIIEAE--VNSVWCPAVVEDI--GSTDIGLHLMGFNQKH-RATPDTLRAIDSGGRPPVDSALVEVGFACQAKYYADTIYYTGKIKSLTEHGCIITFDGYGNSEEVPFAYLTPLPE-----------------PKTETPAEKVDDNKLIPIPAHLAILPTDSEAEKERKRRRIKAIKSLNRQKT----IEAERNSKKNDWTKFTQKQGKKRVVGAMSSIKKTSIFASPATVDGRVGVVGSDQKMTHFEDTRKKFK 302
BLAST of NO30G00490 vs. NCBI_GenBank
Match: CEO94987.1 (hypothetical protein PBRA_003800 [Plasmodiophora brassicae]) HSP 1 Score: 104.0 bits (258), Expect = 1.000e-18 Identity = 98/364 (26.92%), Postives = 165/364 (45.33%), Query Frame = 0
Query: 2 QSLEELQAALATYKTQTDQVQSLLDLDPSNEAYLTLKSDLQAAIKLTHDL--IRTQEDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKGGEAGWVPAVGERVDAPWGTGEKRFPAVVVA-VEKGGEIVTLKY----YGYAETEVKPTSDVRLLTPPGGSATLPPGVATVGWKGEAVWVGDGQWYEAQVLGLVEHG-YRIKFVKYGNEGEVPLEFLREKSSSSSGAYAGGGEAGNEGVPKRGREAKEVKEFVIPDALRLLPTDSEEEKARKRRKVKHLKGLWKQRTRGGXXXEDEVEETR-SWQAYLAKSKRPKLGMGALKKGSIFKSPEAVDGKVGVMGSGAGMTDFAK 357
QS+EEL A LA ++ V+ LL ++ + L++DL I LT +L +RT+ + W AVG+R A W + + A + + V+ +++ L Y G + ++P +V L VG K A++ DG +Y A+V + + G + F Y + G+V ++ ++ ++S A + +E VP++ VIPDAL++LP DSE +K KR ++K +K T +D+ + + SWQA+ + + + GALKK S+F+SP+ VDG+VGV+GSG GMT+++K
Sbjct: 4 QSVEELSAKLAEHRRNLQSVEQLLLTKAGDDTLIALRNDLLTVIDLTQNLLNVRTKHEQGGTPTAPRVL-------------------------------------RNW--AVGDRCLARWSEDNQWYSARITSIVDDKYDVIFLDYGNTEAGLSAKALRPEREVALTD------------LEVGMKLSAIYEQDGLFYNAEVQSIEDDGTITVFFTDYNHPGQVTVDHVKLSAASRKRAASEMTRGASEPVPEKP---------VIPDALKILPGDSEVQKKAKRARIKAIKS-----THRFKKMDDQTQTKKSSWQAFQSNA----IQKGALKKESMFRSPDTVDGRVGVVGSGQGMTEYSK 298
BLAST of NO30G00490 vs. NCBI_GenBank
Match: OQS05099.1 (hypothetical protein THRCLA_02721 [Thraustotheca clavata]) HSP 1 Score: 103.2 bits (256), Expect = 1.800e-18 Identity = 95/362 (26.24%), Postives = 149/362 (41.16%), Query Frame = 0
Query: 3 SLEELQAALATYKTQTDQVQSLLDLDPSNEAYLTLKSDLQAAIKLTHDLIRTQEDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKGGEAGWVPAVGERVDAPWGTGEKRFPAVVVAVEKGGEIVTLKYYGYAETEVKPTSDVRLLTPPGGSATLPPGVATVGWKGEAVWVGDGQWYEAQVLGLVEHGYRIKFVKYGNEGEVPLEFLREKSSSSSGAYAGGGEAGNEGVPKRGREAKEVKEFVIPDALRLLPTDSEEEKARKRRKVKHLKGLWKQRTRGGXXXEDEVEETRSWQAYLAK--SKRPKLGMGALKKGSIFKSPEAVDGKVGVMGSGAGMTDF--AKRAFK 361
S+ ELQ L T+K+Q + ++ LL DP N+ + + +DL+ I+LT D++ + + W P V E +D + G + + G + +D+R + GG + + VG+ +A + D ++Y ++ + EHGY I F YGN EVPL +L + EA E P++ + K V IP L +LPTD+E E ++K +K L +Q+T + + W + K KR M +LKK SIF SP VDG+VGV+GS MT F ++ FK
Sbjct: 9 SIAELQERLVTFKSQLETIEILLTSDPDNQELVGIANDLKEVIRLTTDMLAHNQPEETTQSPYPVGTSVEVNVL-----------------------------SSWCPGVVEAID----------------LGSDGNEIAVHLLGSNQKHQVKLTDIRNI-DAGGLPLVDASLIEVGFSCQAKYYVDSKYYSGKITSITEHGYIILFDGYGNSEEVPLAYLTPLA-----------EAKEEAKPEKADDNKLVP---IPPHLNILPTDTEAEXXXXXXRIKAIKSLNRQKT----IEVERNAKKNDWTKFTQKQGKKRVLGAMTSLKKTSIFASPATVDGRVGVIGSDQKMTQFEDTRKKFK 306
BLAST of NO30G00490 vs. NCBI_GenBank
Match: XP_001009911.1 (nucleic acid-binding protein, putative [Tetrahymena thermophila SB210] >EAR89665.1 nucleic acid-binding protein, putative [Tetrahymena thermophila SB210]) HSP 1 Score: 100.9 bits (250), Expect = 8.800e-18 Identity = 73/247 (29.55%), Postives = 120/247 (48.58%), Query Frame = 0
Query: 125 KRFPAVVVAVEKGGEIVTLKYYGYAE--------TEVKPTSDVRLLTPPGGSATLPPGVATVGWKGEAVWVGDGQWYEAQVLGLVEHG-YRIKFVKYGNEGEVPLEFLREKSSSSSGAYAGGGEAGNEGVPKRGREAKEVKEFVIPDALRLLPTDSEEEKARKRRKVKHLKGLWKQRTRGGXXXEDEVEETRSWQAYLAKSKRPKLGMGALKKG--SIFKSPEAVDGKVGVMGSGAGMTDFAKRAFK 361
K + ++ V+ + V ++ GY++ T++KP D L P G+ EA++ DG++Y + + E G Y IKF KY N+ E+ + LRE + ++ R ++ EF +PD L++LP D+E+ + K++KVK LK +KQ + + E+ W + + K G KK SIF+SPE ++GKVGV GSG GMT+F+ R ++
Sbjct: 131 KWYHGIITYVDNDEQKVIVQIIGYSDIVTVNSVYTKLKPKPDPELFQP--------------GFACEAIYPDDGKYYPCIIEKITEDGRYVIKFKKYNNKEELSIYLLRESRKTQQD-------------HRKKRTFDDLTEFKVPDNLKILPNDNEQVRQTKKKKVKALKQQFKQ----AQIEKHQSEKQNKWNDFKNNASSKKAGHFQSKKSQQSIFQSPETIEGKVGVTGSGKGMTNFSVRNYQ 346
BLAST of NO30G00490 vs. NCBI_GenBank
Match: XP_004030050.1 (nucleic acid binding, putative [Ichthyophthirius multifiliis] >EGR28814.1 nucleic acid binding, putative [Ichthyophthirius multifiliis]) HSP 1 Score: 99.0 bits (245), Expect = 3.300e-17 Identity = 73/237 (30.80%), Postives = 120/237 (50.63%), Query Frame = 0
Query: 125 KRFPAVVVAVEKGGEIVTLKYYGYAETEVKPTSDVRLLTPPGGSATLPPGVATVGWKGEAVWVGDGQWYEAQVLGLVEHG-YRIKFVKYGNEGEVPLEFLREKSSSSSGAYAGGGEAGNEGVPKRGREAKEVKEFVIPDALRLLPTDSEEEKARKRRKVKHLKGLWKQRTRGGXXXEDEVEETRSWQAY--LAKSKRPKLGMGALKKGSIFKSPEAVDGKVGVMGSGAGMTDFAKRA 359
K + VV +V +I+ ++ GY + + V+L P P + G+ EA++ DG++Y + + E G Y +KF KY N+ E+ L LRE N+ ++ R ++ EF +PD L+ LP +SE+ + K++KVK LK +KQ + +E+ W+ + A+ K+ + G K SIF+SPE ++GKVGV SG GMT+F+ R+
Sbjct: 126 KWYHGVVTSVNSDDQIINVQIIGYRDNIQIDSVYVKLKPKP------DPELFQPGFACEAIYSDDGKYYPCIIEKITEDGRYVVKFKKYNNKEELSLYMLRESRK-------------NQQDHRKKRTFDDLTEFKVPDNLKYLPNESEQTRLMKKKKVKALKQQFKQ----AQLEKSSMEKQEKWKDFKSTAQMKKKEHFSGRTSK-SIFQSPETIEGKVGVTNSGKGMTNFSVRS 338
BLAST of NO30G00490 vs. NCBI_GenBank
Match: XP_012842335.1 (PREDICTED: survival of motor neuron-related-splicing factor 30 [Erythranthe guttata] >EYU33296.1 hypothetical protein MIMGU_mgv1a010686mg [Erythranthe guttata]) HSP 1 Score: 96.7 bits (239), Expect = 1.700e-16 Identity = 96/362 (26.52%), Postives = 152/362 (41.99%), Query Frame = 0
Query: 3 SLEELQAALATYKTQTDQVQSLLDLDPSNEAYLTLKSDLQAAIKLTHDLIRTQEDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKGGEAGWVPAVGERVDAPWGTGEKRFPAVVVAVEKGGEIVTLKYYGYAETEVKPTSDVRLLTPPGGSATLPPGVATVGWKGEAVWVGDGQWYEAQVLGLVEHGYRIKFVKYGNEGEVPLEFLREKSSSSSGAYAGGGE---AGNEGVPKRGREA--KEVKEFVIPDALRLLPTDSEEEKARKRRKVKHLKGLWKQRTRGGXXXEDEVEETRSWQAY-LAKSKRPKLG-MGALKKGSIFKSPEAVDGKVGVMGSGAGMTDFAKR 358
S+EEL A L+TYK Q QV+ LL+ DP N +L ++ +L I+LT +L+ T + + D+ G +VA G L G + E + T+D P +G K +AVW DG+WY+ + L +GY +++ +GN EV + +R S+ + A E + ++ +A KE + + +P L++ P DSE+ KA KR+K+ +K + R + + +WQ + K + K+G K+ SIFKSP+ GKVGV GSG G+T+F KR
Sbjct: 12 SIEELAANLSTYKQQLGQVRKLLNDDPKNSEFLDMQKELMEVIQLTEELLETAKHS----------------------------------------------------------DSSPG---------IVAGTNGESSQNLHLSGNSFQESRSTADDGDKFP-------------IGTKVQAVWSEDGEWYDGTIEELTPNGYYVRYDGWGNREEVDPDNVRPIQESNPDPLLEAEKIAVATKEALKRKIAQAASKESESWTVPQKLQIDPNDSEDVKAAKRKKLH----AFKSKMRMEAKEVTQNKRQNAWQQFQTTKGRAKKVGFFSGRKRESIFKSPDDPFGKVGVTGSGKGLTEFQKR 289
BLAST of NO30G00490 vs. NCBI_GenBank
Match: XP_022155149.1 (survival of motor neuron-related-splicing factor 30 [Momordica charantia]) HSP 1 Score: 96.7 bits (239), Expect = 1.700e-16 Identity = 96/363 (26.45%), Postives = 149/363 (41.05%), Query Frame = 0
Query: 3 SLEELQAALATYKTQTDQVQSLLDLDPSNEAYLTLKSDLQAAIKLTHDLIRTQEDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKGGEAGWVPAVGERVDAPWGTGEKRFPAVVVAVEKGGEIVTLKYYGYAET--EVKPTSDVRLLTPPGGSATLPPGVATVGWKGEAVWVGDGQWYEAQVLGLVEHGYRIKFVKYGNEGEVPLEFLREKSSSSSGAYAGG--GEAGNEGVPKRGREAKEV--KEFVIPDALRLLPTDSEEEKARKRRKVKHLKGLWKQRTRGGXXXEDEVEETRSWQAY-LAKSKRPKLG-MGALKKGSIFKSPEAVDGKVGVMGSGAGMTDFAKR 358
S+EEL + L+TYK Q QV+ LLD DPSN Y+ ++ +L+ I LT +L+ T + +G VE G ++ + ET E + SD P +G K +AVW DG+WY+A + +G+ + + +GN+ EV +RE + EA + + ++ +A V + +P LR+ P D E+ KA KR+K+ +K + R + + +WQ + AK K K+G K+ SIFKSP+ +GKVGV GSG G+T+F KR
Sbjct: 8 SIEELASNLSTYKDQLQQVRQLLDDDPSNSEYIDMEKELEEVISLTEELLATAKQNEI-------------------------------------------------------------SGSN--------VETGDNSASISFLQSKETKMEAESLSDHHEKFP-------------IGSKVQAVWSEDGEWYDATIEAHTVNGFYVSYDSWGNKEEVDPANVREIQQEVNALLEAERMAEATKQAIKRKIAQAASVDFQSRNLPPKLRIEPDDPEDVKATKRKKIH----AFKSKMRIEQLEVTQNKRQNAWQQFQSAKGKSKKIGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKR 284
BLAST of NO30G00490 vs. NCBI_GenBank
Match: XP_006385091.1 (survival of motor neuron-related-splicing factor 30 [Populus trichocarpa] >ABK93570.1 unknown [Populus trichocarpa] >PNT42746.1 hypothetical protein POPTR_004G229200v3 [Populus trichocarpa]) HSP 1 Score: 95.9 bits (237), Expect = 2.800e-16 Identity = 98/359 (27.30%), Postives = 146/359 (40.67%), Query Frame = 0
Query: 3 SLEELQAALATYKTQTDQVQSLLDLDPSNEAYLTLKSDLQAAIKLTHDLIRTQEDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKGGEAGWVPAVGERVDAPWGTGEKRFPAVVVAVEKGGEIVTLKYYGYAETEVKPTSDVRLLTPPGGSATLPPGVATVGWKGEAVWVGDGQWYEAQVLGLVEHGYRIKFVKYGNEGEVPLEFLREKSSSSSGAYAGGGEAGNEGVPKRGREAKEV--KEFVIPDALRLLPTDSEEEKARKRRKVKHLKGLWKQRTRGGXXXEDEVEETRSWQAY-LAKSKRPKLG-MGALKKGSIFKSPEAVDGKVGVMGSGAGMTDFAKR 358
S+EEL + L+TYK Q QV+ LL DP N Y+ ++ +L I LT +L+ T + E + GTG P GYAE + +D P +G K +AVW DG+WY+A V L +GY + F +GN EV + +R ++ EA + + ++ +A V + +P LR+ P DSE+ KA KR+K+ +K + R + + +WQ + K K K+G K+ SIFKSP+ +GKVGV GSG G+T+F KR
Sbjct: 7 SIEELASNLSTYKEQLHQVRQLLVDDPGNSEYVDMEKELIEVIALTEELLETAKQ-------------------------------------------------------NEISGSHLGTGASASP------------------GYAEPQ---EADQHEKFP-------------IGSKVQAVWSEDGEWYDATVEDLTPNGYYVTFDGWGNREEVDPDNVRPVEFNALLEAEKVAEATKQAIKRKIAQAASVDFQSRTLPAKLRIEPDDSEDVKAAKRKKIHS----FKSKMRFEQLEVAQNKRQNAWQQFQTTKGKTKKVGFFSGRKRESIFKSPDDPNGKVGVTGSGKGLTEFQKR 272
BLAST of NO30G00490 vs. NCBI_GenBank
Match: GAQ84060.1 (survival of motor neuron-related-splicing factor 30 [Klebsormidium nitens]) HSP 1 Score: 94.4 bits (233), Expect = 8.200e-16 Identity = 64/193 (33.16%), Postives = 97/193 (50.26%), Query Frame = 0
Query: 172 PPGVATVGWKGEAVWVGDGQWYEAQVLGLVEHGYRIKFVKYGNEGEVPLEFLREKSSSSSGAYAGGGEAGNEGVPKRGREAKEVKE------FVIPDALRLLPTDSEEEKARKRRKVKHLKGLWKQRTRGGXXXEDEVEETRSWQAYLAKSKRPKLG-MGALKKGSIFKSPEAVDGKVGVMGSGAGMTDFAKR 358
P G +G K EA++ DG+WY+A + + GY IK+ + ++ EV +E +R + A + E R+ E E +P +LR+ P DSEE +A KR+K+ WK + R + + +WQ + + K G KK SIFKSP+ + GKVGV+GSG G+TDF+ R
Sbjct: 95 PEGRLPIGSKVEALYREDGEWYKATIEDFTDAGYLIKYDDFEDKEEVMVEQVRSAEGPGTNPLADAEKVAEEARLALKRKIAEAAEKDPDMPKDLPKSLRINPDDSEEVRATKRKKIHQ----WKSKQRFEKLEVTQNKRQNAWQQFQTSGSKKKAGFFTGKKKESIFKSPDDLSGKVGVVGSGKGLTDFSGR 283
BLAST of NO30G00490 vs. NCBI_GenBank
Match: XP_020589670.1 (survival of motor neuron-related-splicing factor 30 [Phalaenopsis equestris]) HSP 1 Score: 94.4 bits (233), Expect = 8.200e-16 Identity = 95/362 (26.24%), Postives = 144/362 (39.78%), Query Frame = 0
Query: 3 SLEELQAALATYKTQTDQVQSLLDLDPSNEAYLTLKSDLQAAIKLTHDLIRTQEDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKGGEAGWVPAVGERVDAPWGTGEKRFPAVVVAVEKGGEIVTLKYYGYAETEVKPTSDVRLLTPPGGSATLPPGVATVGWKGEAVWVGDGQWYEAQVLGLVEHGYRIKFVKYGNEGEVPLEFLREKSSSSSGAYAGG---GEAGNEGVPKRGREA--KEVKEFVIPDALRLLPTDSEEEKARKRRKVKHLKGLWKQRTRGGXXXEDEVEETRSWQAY-LAKSKRPKLG-MGALKKGSIFKSPEAVDGKVGVMGSGAGMTDFAKR 358
S+EEL + L+TYK Q ++V+ LL DP N Y ++ +L I LT +L+ T + + E GT + + V E T +Y+ +A VG K +AVW DG+WY+A + L HGY + + +GN+ EV +R A EA + + ++ +A + + IP LR+ P D E+ KA KR+K+ +K + R + + +WQ + AK K K+G K+ SIFKSP+ GKVGV GSG G+T+F KR
Sbjct: 8 SIEELASNLSTYKEQLNEVKRLLADDPGNSEYADMEKELMEVIALTEELLVTTKQVEYSKSD---------------------------------------------TELDEYASTSMGTSKSKLGPV-----GRSEQSTEEYHNFA----------------------------VGTKVQAVWSEDGEWYDATIEALTPHGYFVSYDSWGNKEEVEPYNVRPIRGVEVNALLEAEMQAEATKQAIKRKIAQAAVMDFQRRSIPQKLRIEPNDPEDVKAAKRKKIH----AFKSKARVEQLEVVQNKRQNAWQQFQSAKGKTKKIGFFSGRKRESIFKSPDDPTGKVGVTGSGKGLTEFQKR 287 The following BLAST results are available for this feature:
BLAST of NO30G00490 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO30G00490 ID=NO30G00490|Name=NO30G00490|organism=Nannochloropsis oceanica|type=gene|length=2030bpback to top protein sequence of NO30G00490.2 >NO30G00490.2-protein ID=NO30G00490.2-protein|Name=NO30G00490.2|organism=Nannochloropsis oceanica|type=polypeptide|length=279bpback to top protein sequence of NO30G00490.1 >NO30G00490.1-protein ID=NO30G00490.1-protein|Name=NO30G00490.1|organism=Nannochloropsis oceanica|type=polypeptide|length=374bpback to top Synonyms
Publications
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