NO30G00480, NO30G00480 (gene) Nannochloropsis oceanica

Overview
NameNO30G00480
Unique NameNO30G00480
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1419
Alignment locationchr30:196302..197720 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr30genomechr30:196302..197720 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of NO30G00480 vs. NCBI_GenBank
Match: EWM20586.1 (hypothetical protein Naga_100649g4, partial [Nannochloropsis gaditana])

HSP 1 Score: 661.4 bits (1705), Expect = 2.100e-186
Identity = 313/423 (74.00%), Postives = 351/423 (82.98%), Query Frame = 0
Query:    1 MWALIATLLTYWRVFFYFWRSSGDFEGCPFLKREQDLPAKVHVYGLWLDLYLWDRPHYRAPTYRHDLLANLCNVAVPGTGLPLSFFCVAKPLAYLFFTLLYPVVAFLGAVNVARTAPKSQGKYAALTEAFREHLLTPEDWFNFWRLNSRIAAYHELLTHSPGYAQEDKWTFLMDGDRLGVPVSPVLKTASIVVKNKNEEGGLGIYFYKNALAGGDWIIQERLQNSDFLREHLLPPNAPLSTLRVITASRGGLTPDDPRVGRPATDEGFANLPANHIEALSCVFRAGRTGAATDHSSILFDVDVTTGLICEGSINAHWYELGVGKPFRTAWRSTYTTNTHPDAPGLVVTGRHIHADMAALRALVCRAHFLMLPDVPFVGWDVALTSTGEFLLEVNLSCNFFRGSFEKPRYFAFCRDYLVQLQKV 424
            MWAL+ TL TYWR  FYFW S+GDF GCP LK E +L AK+HVYG+WLDLYLW  PHYRAP+YRHDLLANL NVA+PGTG+PLS FCVAKP+A++FF  LYP+ A  GAVNVARTA   +GKYAAL  AF EHLL P+DWF++WRLNSR+AAYH++LT SPGYAQEDKWTFL +G RLGVPVSPVL+ ASIVVKNKNEEGGLGIYFY+NALAGGDWIIQERL+NSDFLR+HLLPP APLSTLRVITASRGGLTP DPR+G   TDEGF+ LP +HI+ALSCVFRAGR GAATDH+SILFDVD  TG + EGS NAHWY+LG+    RT WRS Y T  HPDAP   +TG  I  DM  +R LV RAHFLMLPDVP VGWDVALT+ G  LLEVNLSCNFFRG+F+K  YF FCRDYL  LQK+
Sbjct:    1 MWALLLTLATYWRALFYFWWSNGDFIGCPLLKGEVNLAAKIHVYGIWLDLYLWALPHYRAPSYRHDLLANLRNVALPGTGIPLSTFCVAKPVAWVFFLFLYPLAAMAGAVNVARTARGLRGKYAALAAAFHEHLLAPQDWFSYWRLNSRMAAYHQVLTGSPGYAQEDKWTFLREGARLGVPVSPVLEHASIVVKNKNEEGGLGIYFYRNALAGGDWIIQERLENSDFLRQHLLPPGAPLSTLRVITASRGGLTPADPRLGHAPTDEGFSALPVDHIQALSCVFRAGRAGAATDHASILFDVDAETGRVREGSTNAHWYQLGLRSIPRTPWRSRYRTAAHPDAPARPLTGLQI-PDMGGIRRLVRRAHFLMLPDVPLVGWDVALTTKGLVLLEVNLSCNFFRGTFQKGPYFQFCRDYLDVLQKL 422          
BLAST of NO30G00480 vs. NCBI_GenBank
Match: CBN73849.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 424.5 bits (1090), Expect = 4.400e-115
Identity = 215/423 (50.83%), Postives = 277/423 (65.48%), Query Frame = 0
Query:    2 WALIATLLTYWRVFFYFWRSSGDFEGCPFLKREQDLPAKVHVYGLWLDLYLWDRPHYRAPTYRHDLLANLCNVAVPGTGLPLSFFCVAKPLAYLFFTLLYPVVAFLGAVNVARTAPKSQGKYAALTEAFREHLLTPEDWFNFWRLNSRIAAYHELLTHSPGYAQEDKWTFLMDGDRLGVPVSPVLKTASIVVKNKNEEGGLGIYFYKNALAGGDWIIQERLQNSDFLREHLLPPNAPLSTLRVITASRGGLTPDDPRVGRPATDEGFANLPANHIEALSCVFRAGRTGAATDHSSILFDVDVTTGLICEGSINAHWYELGVGKPFRTAWRSTYTTNTHPDAPGLVVTGRHIHADMAALRALVCRAHFLMLPDVPFVGWDVALTSTGEFLLEVNLSCNFFRGSFEKPRYFAFCRDYLVQLQKVR 425
            W  I+  + ++R   YF  + G ++ CP+      L A+V  Y L L  YLW +PHYR  +++ D+  NL NVA+PGTG+PLSF+C  K + YLF  ++ P + F+ A+N+ R      G+  A  +A+ E LL P+DWF+FWRLN R+A+YH L+T S GY QEDKWTFL DG   GVP+SP L   ++V+K+KNEEGG+G+YF+KNA AGGDWIIQERL N +F+   LLP  APLST+RVI+ASR  L     ++  P+            +++LSCVFRAGR  A TDHSSILFDVD +TG + +G+ NAHWYELG  K F T W ST+    HPD   L +TG  I  D+     LV  AHF +LPDVP VGWDVALT+ G +LLEVNLSCNFFRGSF    Y  F  DY V L++ R
Sbjct:   15 WTAISDTVRFYRCLLYF-LTGGTYKECPYFATR--LQARVQCYSLGLIFYLWSKPHYRNASFKEDMFKNLRNVAIPGTGIPLSFYCSFKAMVYLFILVVNPAICFMAALNLQR----KHGRPWA--QAYIEQLLCPQDWFSFWRLNCRLASYHALVTGSEGYRQEDKWTFLRDGKSKGVPISPFLDIPAVVIKDKNEEGGMGLYFFKNATAGGDWIIQERLDNDEFVTS-LLPDRAPLSTMRVISASRWWLEKRQGKIPGPSC-----------VDSLSCVFRAGRQDADTDHSSILFDVDASTGTLLKGTTNAHWYELGPTKMFNTPWVSTHDVTHHPDNNKL-ITGEVI-PDIQGKLDLVADAHFKLLPDVPLVGWDVALTTKGVYLLEVNLSCNFFRGSFSLGLYVKFVHDYFVALEEER 414          
BLAST of NO30G00480 vs. NCBI_GenBank
Match: GAX26836.1 (hypothetical protein FisN_9Lh110 [Fistulifera solaris])

HSP 1 Score: 372.1 bits (954), Expect = 2.600e-99
Identity = 204/444 (45.95%), Postives = 271/444 (61.04%), Query Frame = 0
Query:    4 LIATLLTYWRVFFYFWRSSG-----DFEG--CPFLKREQD--------LPAKVHVYGLWLDLYLWDRPHYRAPTYRHDLLANLCNVAVPGTGLPLSFFCVAKPLAYLFFTLLYPVVAFLGAVNVARTAPKSQGKYAALTEAFREHLLTPEDWFNFWRLNSRIAAYHELLTHSP-GYAQEDKWTFLMDGDRLGVPVSPVLKTASIVVKNKNEEGGLGIYFYKNALAGGDWIIQERLQNSDFLREHLLPPNAPLSTLRVITASRGGLTPDDPRVGRPATDEGFANLPANHIEALSCVFRAGRTGAATDHSSILFDVDVTTGLICEGSINAHWYELGVGKPFRTAWRSTYTTNTHPDAPGLVVTGRHIHADMAALRALVCRAHFLMLPDVPFVGWDVALT---STGEFLLEVNLSCNFFRGSFEKPRYFAFCRDYLVQLQKVRRQAE 429
            L+ T LT++R FF++W  +G       EG   P  + EQD          A++H++ L  + YL+ +PHYR  +Y+ DL+ NL NVAVPGTG+PLS F   + +   +   +YP +  + AV+      KS+G+  +L + +   LL P+DWF++WRLN  +   H LL   P  Y  E+KWTFL  G   GVPVSP L + +IVVK++NEEGG+GI+FYKNAL GGDWIIQER+QNSD++ +H LPPNAPLST RVIT SR  +              G   +    + ALSCVFRAGR GAATDH SILFDVDV TG I  G+ NAHWY+LG+   +   WRS+++  +HPD  G +     I  ++  +  LV  +H+ M P VPF GWDV L+   +    LLEVNLSCNFFRGSF+K  Y  F  D    LQ  R +A+
Sbjct:   11 LLNTTLTFYRGFFHYWCGAGRHQPYQREGSFAPLRETEQDDDTTKEFKQHARIHLFSLASNFYLYHKPHYRKSSYKIDLVDNLRNVAVPGTGVPLSLFAWNRWVGLGYLFCVYPKICGIAAVHAWW---KSRGQ-TSLHQEYATRLLAPDDWFSYWRLNCNVVGLHALLHDMPDDYDMENKWTFLQQGVARGVPVSPFLSSPAIVVKHRNEEGGMGIFFYKNALEGGDWIIQERIQNSDWVSKH-LPPNAPLSTFRVITCSRASI--------------GSGEMSPKQVVALSCVFRAGRAGAATDHDSILFDVDVQTGKIRGGTTNAHWYQLGLSALWSCPWRSSHSYESHPD--GNIPVAGSIVPNITEMLRLVEESHYKMCPRVPFAGWDVVLSVDPALPVCLLEVNLSCNFFRGSFDKKVYLDFIDDSFADLQIRRLEAD 433          
BLAST of NO30G00480 vs. NCBI_GenBank
Match: GAX20392.1 (hypothetical protein FisN_9Hh110 [Fistulifera solaris])

HSP 1 Score: 370.5 bits (950), Expect = 7.500e-99
Identity = 202/444 (45.50%), Postives = 270/444 (60.81%), Query Frame = 0
Query:    4 LIATLLTYWRVFFYFWRSSG-----DFEG--CPFLKREQD--------LPAKVHVYGLWLDLYLWDRPHYRAPTYRHDLLANLCNVAVPGTGLPLSFFCVAKPLAYLFFTLLYPVVAFLGAVNVARTAPKSQGKYAALTEAFREHLLTPEDWFNFWRLNSRIAAYHELLTHSP-GYAQEDKWTFLMDGDRLGVPVSPVLKTASIVVKNKNEEGGLGIYFYKNALAGGDWIIQERLQNSDFLREHLLPPNAPLSTLRVITASRGGLTPDDPRVGRPATDEGFANLPANHIEALSCVFRAGRTGAATDHSSILFDVDVTTGLICEGSINAHWYELGVGKPFRTAWRSTYTTNTHPDAPGLVVTGRHIHADMAALRALVCRAHFLMLPDVPFVGWDVALTSTGEF---LLEVNLSCNFFRGSFEKPRYFAFCRDYLVQLQKVRRQAE 429
            L+ T LT++R FF++W  +G       EG   P  + EQD          A++H++ L  + YL+ +PHYR  +Y+ DL+ NL NVAVPGTG+PLS F   + +   +   +YP +  + A++      KS+G+  +L + +   LL P+DWF++WRLN  +   H LL   P  Y  E+KWTFL +G   GVPVSP L + +IVVK++NEEGG+GI+FYKNAL GGDWIIQER+QNS+++  H LPPNAPLST RVIT SR  +              G   +    + ALSCVFRAGR GAATDH SILFDVDV TG I  G+ NAHWY LG+   +   WRS+++  +HPD  G +     I  ++  +  LV  +H+ M P VPF GWDV L++       LLEVNLSCNFFRGSF+K  Y  F  D    LQ  R +A+
Sbjct:   11 LLNTTLTFYRGFFHYWCGAGRHQPYQKEGSFAPLKETEQDDAATKEFKQHARIHLFSLASNYYLYHKPHYRKSSYKIDLVDNLRNVAVPGTGVPLSLFAWNRWVGLGYLFCVYPKICGIAALHAWW---KSRGQ-TSLHQEYATRLLAPDDWFSYWRLNCNVVGLHALLHDMPDDYDMENKWTFLQEGVARGVPVSPFLSSPAIVVKHRNEEGGMGIFFYKNALEGGDWIIQERIQNSNWVSNH-LPPNAPLSTFRVITCSRASI--------------GSGEMSPEQVVALSCVFRAGRAGAATDHDSILFDVDVQTGKIRGGTTNAHWYRLGLSALWSCPWRSSHSYESHPD--GEIPVAGSIVPNITEMLRLVEESHYKMCPRVPFAGWDVVLSADPALPVCLLEVNLSCNFFRGSFDKKVYLDFIDDSFADLQNRRLEAD 433          
BLAST of NO30G00480 vs. NCBI_GenBank
Match: XP_001750058.1 (hypothetical protein [Monosiga brevicollis MX1] >EDQ85054.1 predicted protein [Monosiga brevicollis MX1])

HSP 1 Score: 370.2 bits (949), Expect = 9.800e-99
Identity = 195/426 (45.77%), Postives = 268/426 (62.91%), Query Frame = 0
Query:    5 IATLLTYWRVFFYFWRSSGDFEGCPFLKREQDLPAKVHVYGLWLDLYLWDRPHYRAPTYRHDLLANLCNVAVPGTGLPLSFFCVAKPLAYLFFTLLYPVVAFLGAVNVARTAPKSQGKYAALTEAFREHLLTPEDWFNFWRLNSRIAAYHELLTHSPGYAQEDKWTFLMDGDRLGVPVSPVLKTASIVVKNKNEEGGLGIYFYKNALAGGDWIIQERLQNSDFLREHLLPPNAPLSTLRVITASRGGLTPDDPRVGRPATDEGFANLPANH---IEALSCVFRAGRTGAATDHSSILFDVDVTTGLICEGSINAHWYELGVGKPFRTAWRSTYTTNTHPDAPGLVVTGRHIHADMAALRALVCRAHFLMLPDVPFVGWDVALT-STGEFLLEVNLSCNFFRGSFEKPRYFAFCRDYLVQLQKVRRQ 427
            IA+ L YWR   +F    G ++  P  +  Q +  +VHVY L L LYLW+RPHYR+ T++ D   NL NV  PGTG+PLS+  +A+P+  L   L  P++A + AV +       +    A+ E + + LL PE+WF +WRLN R+A+YH  LT + G+  EDKWTFL++ +RLGVP+SPV+K  +++VK++NEEGG+GI+ ++NA AGG WIIQ+ L N + + +  LP +APLST+RVIT+S G +          ATD+G  +  A+    +  LSCVFRAGR GAATDHSSILFDVD  +G I  G+ NAHWY LG+ +     ++       HPD+ G  +T      +M  ++ L   AH  +LPDVP  GWDVALT   G  LLEVNLSCNFF GSF++  YF +  + L  L + RRQ
Sbjct:  337 IASTLAYWRGLAFF-SLGGAYDKSPVFQEPQQIRRRVHVYSLSLILYLWNRPHYRSGTFQQDTAKNLRNVCFPGTGIPLSWIALARPVMVLALFLGAPLLALVYAVVLT-----GRAGLPAIFEKYEQLLLEPEEWFFYWRLNCRLASYHAYLTKAQGFCMEDKWTFLVEAERLGVPISPVMKVPALIVKDRNEEGGMGIHLFRNAEAGGRWIIQQALTNDESIAK-WLPEHAPLSTMRVITSSDGAM--------HVATDKGLPDSDADRLSDVRVLSCVFRAGREGAATDHSSILFDVDQRSGRIGNGTTNAHWYRLGLHRHL-LQYQPAPQCTEHPDS-GATLTNESFE-NMDDIKRLCREAHARLLPDVPLAGWDVALTREAGRCLLEVNLSCNFFNGSFDRDLYFNWMHELLASLDQRRRQ 744          
BLAST of NO30G00480 vs. NCBI_GenBank
Match: XP_004990631.1 (hypothetical protein PTSG_08380 [Salpingoeca rosetta] >EGD77287.1 hypothetical protein PTSG_08380 [Salpingoeca rosetta])

HSP 1 Score: 367.5 bits (942), Expect = 6.400e-98
Identity = 205/455 (45.05%), Postives = 270/455 (59.34%), Query Frame = 0
Query:    9 LTYWRVFFYFWRSSGDFEGCPFLKREQD-------------------------------------LPAKVHVYGLWLDLYLWDRPHYRAPTYRHDLLANLCNVAVPGTGLPLSFFCVAKPLAYLFFTLLYPVVAFLGAVNVARTAPKSQGKYAALTEAFREHLLTPEDWFNFWRLNSRIAAYHELLTHSPGYAQEDKWTFLMDGDRLGVPVSPVLKTASIVVKNKNEEGGLGIYFYKNALAGGDWIIQERLQNSDFLREHLLPPNAPLSTLRVITASRGGLTPDDPRVGRPATDEGFANLPANHIEALSCVFRAGRTGAATDHSSILFDVDVTTGLICEGSINAHWYELGVGKPFRTAWRSTYTTNTHPDAPGLVVTGRHIHADMAALRALVCRAHFLMLPDVPFVGWDVALT-STGEFLLEVNLSCNFFRGSFEKPRYFAFCRDYLVQLQKVRR 426
            L YWRV +YF R  G ++ CPFL                                          L  KV+++ L L  YLWD+PHYR+ T+++D++ NL NVA PGTG+PL + C ++ +  LF  L  P++    AV + R     +   A +   +R+ LLTPE WF +WRLN R+A+YH L+T    Y  EDKW+FL+  +   +PVSP LK  SIV K++NEEGG+GI+F+KNAL GG WIIQE L NS  L++  LP +APLSTLRVITAS   L   D  +      +G A+     +++LSCVFRAGR GA+TDHSS+LFD DV +G +  G+ NAHWY+LGV       +R   T + HPD  G+++TG  I  DMAA+R LV  AH  +LP VP  GWDVALT   G  LLEVNLSCNFF G+F+K  YFA    +  +L + RR
Sbjct:   53 LLYWRVLWYFAR-GGSYDDCPFLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARLRIKVYLHSLALIFYLWDKPHYRSGTFQNDMIKNLRNVAFPGTGVPLDWLCRSRAVFTLFLFLGMPLMFCAYAVVITR----KRASVADVCRTYRQLLLTPEPWFAYWRLNCRLASYHALVTGCDDYRLEDKWSFLVAAEEKDIPVSPFLKVDSIVCKDRNEEGGMGIHFFKNALHGGKWIIQEVLHNSALLQQ-WLPDSAPLSTLRVITASTNALDVIDGEM------DGDASARKEKVQSLSCVFRAGRAGASTDHSSVLFDTDVESGHVRRGTTNAHWYQLGVHDGL-LRYRPAPTHDRHPD-NGVMLTGNSI-PDMAAIRNLVETAHATLLPGVPLCGWDVALTKEAGRCLLEVNLSCNFFNGTFDKQAYFALLDTFFARLDRKRR 492          
BLAST of NO30G00480 vs. NCBI_GenBank
Match: XP_002292502.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED90477.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 365.2 bits (936), Expect = 3.200e-97
Identity = 191/397 (48.11%), Postives = 259/397 (65.24%), Query Frame = 0
Query:   39 AKVHVYGLWLDLYLWDRPHYRAPTYRHDLLANLCNVAVPGTGLPLSFFCVAKPLAYLFFTLLYPVVAFLGAVNVARTAPKSQGKYAALTEAFREHLLTPEDWFNFWRLNSRIAAYHELLTHSP-GYAQEDKWTFLMDGDRLGVPVSPVLKTASIVVKNKNEEGGLGIYFYKNALAGGDWIIQERLQNSDFLREHLLPPNAPLSTLRVITASRGGLTPDDPRVGRPATDEGFANLPANHIEALSCVFRAGRTGAATDHSSILFDVDVTTGLICEGSINAHWYELGVGK--PFRTAWRS-TYTTNTHPDAPGLVVTGRHIHADMAALRALVCRAHFLMLPDVPFVGWDVALTSTGEF---LLEVNLSCNFFRGSFEKPRYFAFCRDYLVQLQKVRRQAE 429
            A++H+Y L    YL+++PHYR  +YR D++ NL NVA+PGTG+PLS+F   K LA+ F     P  + + ++++      +    ++++E +   LL P+DWF++WRLN R+A  H LL  +P GY  E+KWTFL +G + GVP+SP L T +IVVK++NEEGG+GIYFYKNA  GGDWIIQER+QNS+++ +H LPPNAPLST RVIT SRG L       G    ++         I ALSCVFRAGR  A TDH S++FDVDV TG I  G+ NAHWY LG+ +  P R  WRS  +    HPD   + VTG  +  D+ ++  LV  +H  + PDVP VGWDV L++  +    LLEVNLSCNFFRGSF++  Y  F  D + +LQ +R +A+
Sbjct:   81 ARIHLYTLASAFYLYNKPHYRKDSYRQDIVDNLANVAIPGTGIPLSYFVWNKLLAFGFVCTASPAASIVASLHLWLKTRFA----SSISEEYAVRLLAPDDWFSYWRLNCRVAGLHALLNDNPVGYEMENKWTFLEEGSKRGVPISPYLDTPAIVVKHRNEEGGMGIYFYKNATEGGDWIIQERIQNSEWVNKH-LPPNAPLSTFRVITQSRGALDVVASNKGECKVED---------ITALSCVFRAGRKNAQTDHDSVMFDVDVKTGKILGGTTNAHWYRLGLHEILPGRCPWRSKDHAITNHPDG-DIPVTGETV-PDIRSMLHLVESSHQKLCPDVPLVGWDVVLSADEKVPVCLLEVNLSCNFFRGSFDRKVYLDFLDDMVAKLQGMRLEAD 461          
BLAST of NO30G00480 vs. NCBI_GenBank
Match: XP_009532016.1 (hypothetical protein PHYSODRAFT_361407 [Phytophthora sojae] >EGZ11683.1 hypothetical protein PHYSODRAFT_361407 [Phytophthora sojae])

HSP 1 Score: 364.8 bits (935), Expect = 4.100e-97
Identity = 184/419 (43.91%), Postives = 263/419 (62.77%), Query Frame = 0
Query:    8 LLTYWRVFFYFWRSSGDFEGCPFLKREQDLPAKVHVYGLWLDLYLWDRPHYRAPTYRHDLLANLCNVAVPGTGLPLSFFCVAKPLAYLFFTLLYPVVAFLGA-VNVARTAPKSQGK-YAALTEAFREHLLTPEDWFNFWRLNSRIAAYHELLTHSPGYAQEDKWTFLMDGDRLGVPVSPVLKT-ASIVVKNKNEEGGLGIYFYKNALAGGDWIIQERLQNSDFLREHLLPPNAPLSTLRVITASRGGLTPDDPRVGRPATDEGFANLPANHIEALSCVFRAGRTGAATDHSSILFDVDVTTGLICEGSINAHWYELGVGKPFRTAWRSTYTTNTHPDAPGLVVTGRHIHADMAALRALVCRAHFLMLPDVPFVGWDVALTSTGEFLLEVNLSCNFFRGSFEKPRYFAFCRDYLVQLQKV 424
            LL+++    Y+W   G +  CPF     DL AK +VY + L   LW +PHYR P++  DL+ NL NVA+PGTG+PLS    ++ + + F   +YP +  +GA   + +     QG  +      F +  + P++WF FWR+N  + + H L T SPGY  E+KW FL++ ++ G+ VSP LKT  S+VVK++NEEGG+GI+ +KNA+ GGDWIIQE+L NS F+++ LLP  +PLST R+ITASR GL   +      A  +G      N +++LSCVFRAG  GA+TDH SI+FDVD+ +G I +GS   HWY +G    FR      +    HPD  G+ +TG ++  ++  ++ L   AH+ ++ DVP  GWDVALT+ G  LLEVN+SCNFFRG+F++P YF F  DY   L+K+
Sbjct:   16 LLSFYGSLLYYWVRKGSYSECPFF--ADDLHAKTYVYSIALLNPLWSQPHYRHPSFYKDLVTNLRNVAIPGTGVPLSIVSYSRLILFPFMLFVYPWLCAIGAFFELPKEYSNKQGSIFERFIRTFTQIFVCPQNWFAFWRVNCHVVSLHSLKTDSPGYLMENKWDFLLEAEKQGIAVSPYLKTPGSLVVKDRNEEGGMGIFMFKNAVDGGDWIIQEKLDNSPFIKK-LLPEVSPLSTFRIITASRHGLGEAE------ALKDG-----GNGVKSLSCVFRAGLAGASTDHKSIMFDVDMESGKILKGSTTTHWYRVGPHHMFRGNLSVGHDITNHPDT-GVPITG-NVIKEIKQMKELAEEAHYKLMKDVPLCGWDVALTNLGVLLLEVNISCNFFRGTFDQPWYFQFLDDYFRHLEKL 418          
BLAST of NO30G00480 vs. NCBI_GenBank
Match: XP_024573007.1 (hypothetical protein PHALS_03310 [Plasmopara halstedii] >CEG36638.1 hypothetical protein PHALS_03310 [Plasmopara halstedii])

HSP 1 Score: 364.0 bits (933), Expect = 7.000e-97
Identity = 183/419 (43.68%), Postives = 264/419 (63.01%), Query Frame = 0
Query:    8 LLTYWRVFFYFWRSSGDFEGCPFLKREQDLPAKVHVYGLWLDLYLWDRPHYRAPTYRHDLLANLCNVAVPGTGLPLSFFCVAKPLAYLFFTLLYPVVAFLGA-VNVARTAPKSQGKY-AALTEAFREHLLTPEDWFNFWRLNSRIAAYHELLTHSPGYAQEDKWTFLMDGDRLGVPVSPVLKT-ASIVVKNKNEEGGLGIYFYKNALAGGDWIIQERLQNSDFLREHLLPPNAPLSTLRVITASRGGLTPDDPRVGRPATDEGFANLPANHIEALSCVFRAGRTGAATDHSSILFDVDVTTGLICEGSINAHWYELGVGKPFRTAWRSTYTTNTHPDAPGLVVTGRHIHADMAALRALVCRAHFLMLPDVPFVGWDVALTSTGEFLLEVNLSCNFFRGSFEKPRYFAFCRDYLVQLQKV 424
            LL+++    Y+W   G +  CPF     +L AK +VY + L   LWD+PHYR P++  DL+ NL NVA+PGTG+PLS    ++   + F  L+YP +  +GA   + +     QG +       F + L+ P++WF FWR+N  + + H L T+SPGY  E+KW FL++ ++ G+ +SP LK+  S+V+K++NEEGG+GI+ +KNA+ GGDWIIQE+L NS FL++ LLP  +PLST R+ITASR GL   + R      D G      N +++LSCVFRAG  GAATDH SI+FDVD+ +G I +GS   HWY +G    F       +    HP+  G+ +TG ++  ++  ++ L   AHF ++ DVP  GWDVA+T  G  LLEVN+SCNFFRG+F++P YF F  +Y   L+K+
Sbjct:   16 LLSFYASLLYYWVRRGSYADCPFF--SDNLHAKTYVYSIALLNPLWDQPHYRHPSFYKDLVTNLRNVAIPGTGVPLSIVSYSRLSLFPFLLLVYPWLCVIGAFFELPKEYSSKQGGFIERFLRTFEQILVCPQNWFAFWRMNCHLVSLHSLKTNSPGYVMENKWDFLLESEKAGIAISPYLKSPGSLVIKDRNEEGGMGIFIFKNAVDGGDWIIQEKLDNSPFLKK-LLPEISPLSTFRIITASRYGLGETEAR-----KDGG------NGVKSLSCVFRAGLAGAATDHKSIMFDVDMESGKILKGSTTTHWYRVGPHHLFSGTLSVGHDITNHPNT-GVPITG-NVIKEIKQMKELAEEAHFKLMKDVPLCGWDVAITDLGVLLLEVNISCNFFRGTFDQPWYFKFLDEYFRHLEKL 418          
BLAST of NO30G00480 vs. NCBI_GenBank
Match: OWZ06465.1 (hypothetical protein PHMEG_00021275 [Phytophthora megakarya])

HSP 1 Score: 364.0 bits (933), Expect = 7.000e-97
Identity = 185/419 (44.15%), Postives = 263/419 (62.77%), Query Frame = 0
Query:    8 LLTYWRVFFYFWRSSGDFEGCPFLKREQDLPAKVHVYGLWLDLYLWDRPHYRAPTYRHDLLANLCNVAVPGTGLPLSFFCVAKPLAYLFFTLLYPVVAFLGA-VNVARTAPKSQG-KYAALTEAFREHLLTPEDWFNFWRLNSRIAAYHELLTHSPGYAQEDKWTFLMDGDRLGVPVSPVLKT-ASIVVKNKNEEGGLGIYFYKNALAGGDWIIQERLQNSDFLREHLLPPNAPLSTLRVITASRGGLTPDDPRVGRPATDEGFANLPANHIEALSCVFRAGRTGAATDHSSILFDVDVTTGLICEGSINAHWYELGVGKPFRTAWRSTYTTNTHPDAPGLVVTGRHIHADMAALRALVCRAHFLMLPDVPFVGWDVALTSTGEFLLEVNLSCNFFRGSFEKPRYFAFCRDYLVQLQKV 424
            LL+++    ++W   G +  CPF     DL AK +VY + L   LW +PHYR P++  DL+ NL NVA+PGTG+PLS    ++ + + F   +YP +  +GA   + +     QG         F +  + P++WF FWR+N  + + H L T+SPGY  E+KW FL++ ++ G+ VSP LKT  S+V+K++NEEGG+GI+ +KNA+ GGDWIIQE+L NS FL++ LLP  +PLST R+ITASR GL   +      A  +G      N +++LSCVFRAG  GAATDH SI+FDVD+ +G I +GS   HWY +G    FR      +    HPD  G+ +TG ++  D+  ++ L   AHF ++ DVP  GWDVA+T+ G  LLEVN+SCNFFRG+F++P YF F  DY   L+K+
Sbjct:   16 LLSFYGSLLHYWVRRGSYAECPFF--SDDLHAKTYVYSIALLNPLWSQPHYRHPSFYKDLVTNLRNVAIPGTGVPLSIVSYSRLILFPFLVFVYPWLCAIGAFFELPKEYSNKQGCVIERFIRTFTQIFVCPQNWFAFWRVNCHVVSLHSLKTNSPGYIMENKWDFLIESEKNGIAVSPYLKTPGSLVIKDRNEEGGMGIFIFKNAVDGGDWIIQEKLDNSPFLKK-LLPEVSPLSTFRIITASRHGLGEAE------ALKDG-----GNGVKSLSCVFRAGLAGAATDHKSIMFDVDMESGKIMKGSTTTHWYRVGPHHMFRGNLSVGHDITNHPDT-GVPITG-NVIKDIKQMKELAEEAHFKLMKDVPLCGWDVAITNLGVLLLEVNISCNFFRGTFDQPWYFQFLDDYFRHLEKL 418          
The following BLAST results are available for this feature:
BLAST of NO30G00480 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM20586.12.100e-18674.00hypothetical protein Naga_100649g4, partial [Nanno... [more]
CBN73849.14.400e-11550.83conserved unknown protein [Ectocarpus siliculosus][more]
GAX26836.12.600e-9945.95hypothetical protein FisN_9Lh110 [Fistulifera sola... [more]
GAX20392.17.500e-9945.50hypothetical protein FisN_9Hh110 [Fistulifera sola... [more]
XP_001750058.19.800e-9945.77hypothetical protein [Monosiga brevicollis MX1] >E... [more]
XP_004990631.16.400e-9845.05hypothetical protein PTSG_08380 [Salpingoeca roset... [more]
XP_002292502.13.200e-9748.11predicted protein [Thalassiosira pseudonana CCMP13... [more]
XP_009532016.14.100e-9743.91hypothetical protein PHYSODRAFT_361407 [Phytophtho... [more]
XP_024573007.17.000e-9743.68hypothetical protein PHALS_03310 [Plasmopara halst... [more]
OWZ06465.17.000e-9744.15hypothetical protein PHMEG_00021275 [Phytophthora ... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR051ncniR051Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR102ngnoR102Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO30G00480.1NO30G00480.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|605932gene_9272Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100649g4gene9818Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO30G00480.1NO30G00480.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO30G00480 ID=NO30G00480|Name=NO30G00480|organism=Nannochloropsis oceanica|type=gene|length=1419bp
ATGTGGGCACTCATAGCCACATTGCTGACTTATTGGCGAGTATTTTTCTA
CTTTTGGCGTTCAAGCGGCGACTTTGAGGGCTGTCCGTTTCTGAAGCGCG
AGCAAGACTTGCCCGCCAAGGTGCACGTCTATGGCCTCTGGCTCGACCTG
TACCTGTGGGACCGACCGCATTACCGGGCGCCAACCTACCGTCATGACCT
CTTGGCGAATCTGTGCAACGTGGCGGTGCCGGGAACGGGCCTCCCCTTGA
GCTTTTTCTGCGTAGCCAAGCCCTTAGCCTACCTGTTCTTCACCCTTCTG
TACCCGGTGGTGGCCTTCCTGGGGGCGGTGAATGTGGCCCGCACGGCGCC
AAAGTCCCAGGGCAAGTACGCGGCTTTGACCGAGGCCTTTCGGGAGCATT
TATTGACACCTGAGGATTGGTTTAATTTCTGGCGGCTCAACTCCCGCATC
GCGGCCTACCATGAGCTGCTCACGCACAGCCCTGGCTACGCGCAGGAAGA
CAAATGGACCTTTTTGATGGACGGGGACCGGCTGGGTGTGCCCGTCTCGC
CCGTGCTCAAGACGGCAAGCATTGTGGTCAAGAACAAAAATGAGGAGGGT
GGCTTGGGCATCTACTTTTACAAAAATGCACTGGCCGGCGGGGACTGGAT
CATCCAAGAACGTCTCCAAAACTCGGACTTTCTCCGCGAGCACCTCCTCC
CGCCCAACGCCCCCCTCTCCACCCTCCGCGTCATCACCGCCTCCCGAGGC
GGCCTCACACCCGACGATCCCCGTGTGGGCCGGCCCGCCACCGACGAGGG
CTTTGCCAACTTGCCCGCCAACCACATCGAGGCGCTCTCCTGTGTCTTCA
GGGCAGGGCGAACAGGCGCCGCCACGGACCACTCCTCCATCCTCTTCGAT
GTGGATGTGACGACCGGCCTGATATGTGAAGGCTCCATCAACGCCCACTG
GTACGAGCTGGGTGTGGGGAAGCCCTTCCGCACGGCGTGGCGGTCCACCT
ACACCACAAACACGCACCCCGACGCGCCTGGCCTGGTGGTGACGGGGCGG
CACATCCACGCGGACATGGCGGCCTTGCGCGCTCTTGTCTGCCGGGCCCA
CTTCTTGATGCTGCCTGACGTGCCTTTCGTGGGATGGGACGTGGCGCTCA
CTAGCACGGGGGAGTTCTTGTTGGAGGTGAATTTGTCGTGCAACTTCTTC
AGGGGCTCGTTCGAGAAGCCTCGGTACTTCGCTTTCTGTCGCGACTACCT
GGTTCAGCTGCAGAAGGTGCGGCGGCAGGCAGAGGGGGGGAGAAGAAGGA
GAGATGAATCAAGGGGACAGGAAAGTCTTGCTTCTCGTAGACTGACACGT
ATGACTACAGTCTCGAGAGGTGGGCCAGAGGCACGTGTACCGGCCGCTTG
TGAGCTCTGTGCCACCTGA
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protein sequence of NO30G00480.1

>NO30G00480.1-protein ID=NO30G00480.1-protein|Name=NO30G00480.1|organism=Nannochloropsis oceanica|type=polypeptide|length=473bp
MWALIATLLTYWRVFFYFWRSSGDFEGCPFLKREQDLPAKVHVYGLWLDL
YLWDRPHYRAPTYRHDLLANLCNVAVPGTGLPLSFFCVAKPLAYLFFTLL
YPVVAFLGAVNVARTAPKSQGKYAALTEAFREHLLTPEDWFNFWRLNSRI
AAYHELLTHSPGYAQEDKWTFLMDGDRLGVPVSPVLKTASIVVKNKNEEG
GLGIYFYKNALAGGDWIIQERLQNSDFLREHLLPPNAPLSTLRVITASRG
GLTPDDPRVGRPATDEGFANLPANHIEALSCVFRAGRTGAATDHSSILFD
VDVTTGLICEGSINAHWYELGVGKPFRTAWRSTYTTNTHPDAPGLVVTGR
HIHADMAALRALVCRAHFLMLPDVPFVGWDVALTSTGEFLLEVNLSCNFF
RGSFEKPRYFAFCRDYLVQLQKVRRQAEGGRRRRDESRGQESLASRRLTR
MTTVSRGGPEARVPAACELCAT*
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Synonyms
Publications