NO30G00360, NO30G00360 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO30G00360 vs. NCBI_GenBank
Match: EWM27512.1 (lipase class 3 [Nannochloropsis gaditana]) HSP 1 Score: 225.3 bits (573), Expect = 5.400e-55 Identity = 143/443 (32.28%), Postives = 206/443 (46.50%), Query Frame = 0
Query: 219 TTGNYDPFWPACPIFDAANELGSKAGCGVLSFFRRFVT----DLPENYSHPMMFLPDDPQLEDTYAVPFAFDGRGAEKKRTLPLTRVAPELPTYHLLYRVIFYLVKYTFQTEDNFIAGRKIPELPTIVKGWKDQRLY-----------WFNLPIRGTDDFRLTPYALSMVSEDGSKMIFVTRGTLWQEEWIMDFEYSYSTDPLAEKLFPGHVHSGIFKMFNLIQEEVIQEVLRVNPKHVLVGGHSLGGAEAILHGYNIQQVLQRKGKKEGKEAGRVDTVAIGALEAGDQHFVDGVAEVLNQRHMIYVGDGAVTATDKDGKEATGTEYRIGDVFAQYTCGAYMGCDSLGTGPTGVRWPYARAWNQVPFTARNLPNTARFQQAENLSPITGDLPVPSFRNLVSGHICSYQCLFSTYVGDKDFNLCSFKDQQPTTGGLPDEKLCYF 647
T NYDP++P CP+FD N++ S GC + + +T D + S PD +P + R + + E PTY+ YR+I + F+ E + + LP +V+ W +R Y W N+P R +P A+SM+ G +M+ V RGT+W EEW DF+Y ++ D + LFPG H G++ +F + + +EV P HVLV GHSLG A + G ++ LQ K RVD + G GD F D +N RH+I++G G+ Y GD+ AQYTC Y GCD L TGP G + Y R NQVPF ++PN + N+ I +PS + +++ HICSY C S VGD D + C F ++ G PD Y+
Sbjct: 76 TPNNYDPWFPGCPVFDNLNKVAS-FGCNFIRLNKDVLTAFWVDFSKTASTTRPMNPDG-------LLPQILRDHRPDPPRQVGRETIHAERPTYYYCYRLILLMYSIAFEYERSDMQS----ILPKLVEDWDRERWYMVDYLKQTNINWKNIP------HRQSPIAVSMMK--GDRMMVVIRGTIWTEEWCKDFQYRWADD--EDGLFPGRTHEGMYSVFVDFYKGLEEEVESRQPAHVLVTGHSLGAGIANMIGLRLENSLQHK--------PRVDVIGFGGPNTGDTDFADIYRRTVNSRHLIFLGHGS---------SPNPNMYTAGDITAQYTCEPYPGCDVLATGPFGKTYKYVRPHNQVPFYPEDMPNPKTWNDIANVRRI-----IPSTKRVIASHICSYICWTSLAVGDLD-SRCYFASEE----GRPDLPQSYY 469
BLAST of NO30G00360 vs. NCBI_GenBank
Match: EWM19913.1 (hypothetical protein Naga_103162g1, partial [Nannochloropsis gaditana]) HSP 1 Score: 200.3 bits (508), Expect = 1.900e-47 Identity = 92/109 (84.40%), Postives = 97/109 (88.99%), Query Frame = 0
Query: 543 AYMGCDSLGTGPTGVRWPYARAWNQVPFTARNLPNTARFQQAENLSPITGDLPVPSFRNLVSGHICSYQCLFSTYVGDKDFNLCSFKDQQPTTGGLPDEKLCYFPELPY 652
AYMGCDSLGTGPTGVRWPYARAWNQVPF ARNLPNTARFQQAENLSPITGDLPVPSFRNLV+GHICSYQCL ST VGD+ +LC FK Q+ GLP+EKLCYFPEL Y
Sbjct: 6 AYMGCDSLGTGPTGVRWPYARAWNQVPFQARNLPNTARFQQAENLSPITGDLPVPSFRNLVAGHICSYQCLLSTAVGDRGLDLCWFKGQEEAQ-GLPEEKLCYFPELYY 113
BLAST of NO30G00360 vs. NCBI_GenBank
Match: EWM21613.1 (lipase domain-containing protein [Nannochloropsis gaditana]) HSP 1 Score: 109.8 bits (273), Expect = 3.300e-20 Identity = 91/346 (26.30%), Postives = 162/346 (46.82%), Query Frame = 0
Query: 301 VAPELPTYHLLYRVIFYLVKYTFQT-EDNFIAGRKIPELPTIVKGWKDQRLYWFNLPIRGTDDFRLTPYALSMVSEDGSKMIFVTRGTLWQEEWIMDFEYSYSTDPLAEKLFPGHVHSGIFKMFNLIQEEVIQEVLRVNPKHVLVGGHSLGGAEAILHGYNIQQVLQRKG--KKEGKEAGR---VDTVAIGALEAGDQHFVDGVAEVLNQRHMIYVGDGAVTATDKDGKEATGTEYRIGDVFAQY------TC-GAYMGCDSLGTGPTGVRW-PYARAWNQVPFTARNLPNTARFQQAENLSPITGDLPVPSFRNLVSGHICSYQCLFSTYVGDKDFNLCSFKDQQ 633
+ E +Y+ +YR+ Y T ED + L + GW Q +++ N G +R +P+ S+V+E ++ RGT++Q+E+ Y ++ F G VHSG F++F + ++Q++ +P V + GHS+GG A + G + ++ ++ K+EG E G+ V+ + +GA GD+ F + +N R++ Y+G+G + +DG +A G Y +GDV AQ TC + G ++L W Y V ++ NTA ++ N+ P+ +V H C Y C + +GD + C F++Q+
Sbjct: 235 IRAEKASYYYVYRMYDTFYAYATDTAEDKEL-------LDPLAPGWGPQTVHFRNATSVG-GQWRESPF--SVVTEKDGHVLVAMRGTMYQDEYRASSIYEFTEPNETVPYFEGKVHSGAFQLFKEMLPPLLQDIKSRSPNKVTLIGHSVGGVIATMLGAYLGRLDAKEWGVKEEGAERGKGMEVEVLTVGAYAPGDREFWEKAKGGMNVRNIRYLGEGWI----EDGLDAPGKMYTMGDVVAQAPGVPLPTCMHSSSGNETLWGVHKDAGWFDYYMPPCTVAIYPTSIKNTAAWRDKTNMLD-------PARMAVVLSHKCPYTCWLTDGMGDPN-TRCYFQEQR 558
BLAST of NO30G00360 vs. NCBI_GenBank
Match: XP_005854770.1 (lipase-related protein [Nannochloropsis gaditana CCMP526] >EKU21586.1 lipase-related protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 68.2 bits (165), Expect = 1.100e-7 Identity = 73/307 (23.78%), Postives = 120/307 (39.09%), Query Frame = 0
Query: 367 PYALSMVSEDGSKMIFVTRGTLWQEEWIMDFEYSYSTDPLAEKL-FPGHVHSGIFKMFNLIQEEVIQEVLRVNPKHVLVGGHSLGGAEAILHGYNIQQV----LQRK------GKKEGKEAG--------------------RVDTVAIGALEAGDQHFVDGVAEVLNQRHMIYVGDGAVTATDKDGKEATGTE--YRIGDVFAQYTCGAYMGCDSLGTGPTGVRWPYARAWNQVPFTARNLPNTARFQQAENLSPITGDLPVPSFRNLVSGHICSYQC-----LFSTYVGDKDFNLCSFKDQQPTT 636
P+A++M ++ + RG+ E+W +F Y + + A + PG VH G + I + EV R+ P+ + + G S+GGA +++ G + + L K GK +G A + + G GD F E +N R ++G G + +A G + IGD Q + D +G G T + Y+ + T R +PN + + N GD + F+ +V+ H+CSY C L Y G K + K P T
Sbjct: 242 PFAVTMAK--NRHLVVLMRGSTTDEDWAANFNYPFCANESAAAIGIPGRVHQGFLEYLIAIAPLLDAEVERIKPRRISLAGDSVGGAVSVITGAYLARKYASGLDSKVEVIAIGKAKGASAELLFPQVPVKRLQILQHRPCLLLTFMLSGTPRVGDDVFSSFFREHVNGRSPAFLGSGI-----RFRGKAVGFNMVWEIGDFVVQVPWDCFPVPDCVG-GSTET-YMYSYHGGLIKITPRMMPNEDGWMEEANW---LGDFKI-GFKGMVATHMCSYWCWATRGLPPPYEGSKCYFPSDVKHVGPAT 535
BLAST of NO30G00360 vs. NCBI_GenBank
Match: EWM27768.1 (lipase-like protein [Nannochloropsis gaditana]) HSP 1 Score: 66.6 bits (161), Expect = 3.200e-7 Identity = 66/279 (23.66%), Postives = 112/279 (40.14%), Query Frame = 0
Query: 367 PYALSMVSEDGSKMIFVTRGTLWQEEWIMDFEYSYSTDPLAEKL-FPGHVHSGIFKMFNLIQEEVIQEVLRVNPKHVLVGGHSLGGAEAILHGYNIQQV----LQRK------GKKEGKEAG--------------------RVDTVAIGALEAGDQHFVDGVAEVLNQRHMIYVGDGAVTATDKDGKEATGTE--YRIGDVFAQYTCGAYMGCDSLGTGPTGVRWPYARAWNQVPFTARNLPNTARFQQAENLSPITGDLPVPSFRNLVSGHICSYQC 613
P+A++M ++ + RG+ E+W +F Y + + A + PG VH G + I + EV R+ P+ + + G S+GGA +++ G + + L K GK +G A + + G GD F E +N R ++G G + +A G + IGD Q + D +G G T + Y+ + T R +PN + + N GD + F+ +V+ H+CSY C
Sbjct: 53 PFAVTMAK--NRHLVVLMRGSTTDEDWAANFNYPFCANESAAAIGIPGRVHQGFLEYLIAIAPLLDAEVERIKPRRISLAGDSVGGAVSVITGAYLARKYASGLDSKVEVIAIGKAKGASAELLFPQVPVKRLQILQHRPCLLLTFMLSGTPRVGDDVFSSFFREHVNGRSPAFLGSGI-----RFRGKAVGFNMVWEIGDFVVQVPWDCFPVPDCVG-GSTET-YMYSYHGGLIKITPRMMPNEDGWMEEANW---LGDFKI-GFKGMVATHMCSYWC 318
BLAST of NO30G00360 vs. NCBI_GenBank
Match: XP_005845761.1 (hypothetical protein CHLNCDRAFT_136403 [Chlorella variabilis] >EFN53659.1 hypothetical protein CHLNCDRAFT_136403 [Chlorella variabilis]) HSP 1 Score: 66.2 bits (160), Expect = 4.200e-7 Identity = 70/296 (23.65%), Postives = 119/296 (40.20%), Query Frame = 0
Query: 338 LPTIVKG--WKDQRLYWFNLPIRGTD-DFRLTPYALSMVSEDGSKMIFVTRGTLWQEEWIMDFEYSYSTDPLAEKLFPGHVHSGIFKMFNLIQ---EEVIQEVLRVNPKHVLVGGHSLGGAEAILHGYNIQQVLQRKGKKEGKEAGRVDTVAIGALEAGDQHFVDGVAEVLNQRHMIYVGDGAVTATDKDGKEATGTEYRIGDVFAQYTCGAYMGCDSLGTGPTGV-----RWPYARAWNQVPFTARNLPNTARFQQAENLSPITGDLPVPSFRNLVSGHICSYQCLFSTYVGDKD 623
LP ++G W+ + + + +R T+ + P+ +V S+++ RGT+ EW +D++Y+ +T +F VH+G F+ + E +QE++ V V GHSLG A A L Y Q L ++ G+ A V V + FV + +N R + + D A A G G GA + + PT + W Y++ +P ++P A A + + L++ H+CSY C S + D D
Sbjct: 129 LPCSLEGLPWQPPQGWALHTTLRLTEGGGQRVPFGAVIVDPASSQIVVALRGTMTGFEWGLDWQYNQTT--TTPDVFGVPVHAGFGGAFSEVWPDIEAALQELV------VFVVGHSLGAAVATLASYAAQSYLD---EQLGEGAPVVGAVLVAPPNVAGPAFVAEFDQRVNARRLAFQFDIVPQAFCTPTMPACG-----GASADASPVGALLAKAGVSVMPTNMPGNVSAWNYSQVGGGLPIAGDDMPQDAAAWPALQSIQLCW-----AVEFLLASHVCSYTCFTSQFAADAD 403 The following BLAST results are available for this feature:
BLAST of NO30G00360 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 6
Relationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO30G00360 ID=NO30G00360|Name=NO30G00360|organism=Nannochloropsis oceanica|type=gene|length=4945bpback to top protein sequence of NO30G00360.1 >NO30G00360.1-protein ID=NO30G00360.1-protein|Name=NO30G00360.1|organism=Nannochloropsis oceanica|type=polypeptide|length=652bpback to top Synonyms
Publications
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