NO30G00360.1, NO30G00360.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO30G00360.1
Unique Name	NO30G00360.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2810
Alignment location	chr30:156890..161834 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr30	genome	chr30:156890..161834 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO30G00360.1 vs.
Match: EWM27512.1 (lipase class 3 [Nannochloropsis gaditana])

HSP 1 Score: 224.6 bits (571), Expect = 9.200e-55
Identity = 160/522 (30.65%), Postives = 233/522 (44.64%), Query Frame = 0

Query:  142 RTAAAAAVAAAVGTEGMEEVVHPSGSRTLLPG--RGSLREEGREGGLGSRVIEWEEEVAAVSASFKKAMDGFNASTAKETTGNYDPFWPACPIFDAANELGSKAGCGVLSFFRRFVT----DLPENYSHPMMFLPDDPQLEDTYAVPFAFDGRGAEKKRTLPLTRVAPELPTYHLLYRVIFYLVKYTFQTEDNFIAGRKIPELPTIVKGWKDQRLY-----------WFNLPIRGTDDFRLTPYALSMVSEDGSKMIFVTRGTLWQEEWIMDFEYSYSTDPLAEKLFPGHVHSGIFKMFNLIQEEVIQEVLRVNPKHVLVGGHSLGGAEAILHGYNIQQVLQRKGKKEGKEAGRVDTVAIGALEAGDQHFVDGVAEVLNQRHMIYVGDGAVTATDKDGKEATGTEYRIGDVFAQYTCGAYMGCDSLGTGPTGVRWPYARAWNQVPFTARNLPNTARFQQAENLSPITGDLPVPSFRNLVSGHICSYQCLFSTYVGDKDFNLCSFKDQQPTTGGLPDEKLCYF 647
            RT A   V+A  GT+ + ++  P  +     G  R    +E   G  G R++E                  +N S    T  NYDP++P CP+FD  N++ S  GC  +   +  +T    D  +  S      PD         +P        +  R +    +  E PTY+  YR+I  +    F+ E + +       LP +V+ W  +R Y           W N+P       R +P A+SM+   G +M+ V RGT+W EEW  DF+Y ++ D   + LFPG  H G++ +F    + + +EV    P HVLV GHSLG   A + G  ++  LQ K         RVD +  G    GD  F D     +N RH+I++G G+               Y  GD+ AQYTC  Y GCD L TGP G  + Y R  NQVPF   ++PN   +    N+  I     +PS + +++ HICSY C  S  VGD D + C F  ++    G PD    Y+
Sbjct:   13 RTWATLIVSALAGTKALHDMHRPFEAEFTPDGHVRELKLDEALAGDWGYRLLE--------------PYMVYNESDT--TPNNYDPWFPGCPVFDNLNKVAS-FGCNFIRLNKDVLTAFWVDFSKTASTTRPMNPDG-------LLPQILRDHRPDPPRQVGRETIHAERPTYYYCYRLILLMYSIAFEYERSDMQSI----LPKLVEDWDRERWYMVDYLKQTNINWKNIP------HRQSPIAVSMMK--GDRMMVVIRGTIWTEEWCKDFQYRWADDE--DGLFPGRTHEGMYSVFVDFYKGLEEEVESRQPAHVLVTGHSLGAGIANMIGLRLENSLQHKP--------RVDVIGFGGPNTGDTDFADIYRRTVNSRHLIFLGHGS---------SPNPNMYTAGDITAQYTCEPYPGCDVLATGPFGKTYKYVRPHNQVPFYPEDMPNPKTWNDIANVRRI-----IPSTKRVIASHICSYICWTSLAVGDLD-SRCYFASEE----GRPDLPQSYY 469

The following BLAST results are available for this feature:

BLAST of NO30G00360.1 vs.

BLAST of NO30G00360.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM27512.1	9.200e-55	30.65	lipase class 3 [Nannochloropsis gaditana]	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO30G00360	NO30G00360	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO30G00360.1	NO30G00360.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO30G00360.1.cds1	NO30G00360.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO30G00360.1.cds2	NO30G00360.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO30G00360.1.cds3	NO30G00360.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO30G00360.1.cds4	NO30G00360.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO30G00360.1.cds5	NO30G00360.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO30G00360.1.cds6	NO30G00360.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO30G00360.1.cds7	NO30G00360.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO30G00360.1.cds8	NO30G00360.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO30G00360.1.cds9	NO30G00360.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO30G00360.1.cds10	NO30G00360.1.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO30G00360.1.cds11	NO30G00360.1.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr30:156890..161834-
coding sequence from alignment at chr30:156890..161834-

mRNA sequence

>NO30G00360.1 ID=NO30G00360.1|Name=NO30G00360.1|organism=Nannochloropsis oceanica|type=mRNA|length=2810bp
TTCTTTCCCATCCTTTCTCTCTTCTCTCAGAGAGACTCTCTACTAAGCTC
ACCTCTCTTCCTAACCCTTTCGTCTGTCGCATATCCCCACGACCAAAGCC
TCAATGAAAATTTATGTGTTGGTAAAATTGTAATTCTTGTCCATTCGCCC
GCTTTTCCCCTTTGCTCGTGGTGGCTAGCCAAGCTGCAGGGAGGGAGGCA
GAGGACGACGGAGCACACCCGCATGCGGTCGGTCTCCTCTGCTGCATGCC
GATTAGATTCATCATTCCCCCACCGACGCGTAGAGACGCAGATAATAATT
CTGATTCACAGGATGGCACGCTGTCTTCGATTTTTGCCGGGCCAGCCATG
GCTTACCTTGCGTCCCCCTTCGCTTCCTGTACTGGAGCTCCTCCGATCTC
GCTCCAAGCATTCATTCTCATCTACTCATGCGCAAACACTCACGCGCGTA
CACACACACATTATCTTTTCCCCTCAATGTTTGCCAAGCAATCAACATGG
CCCGGCTTCTTCTTCTCTCCCTCTTGTCCCTCTCCTCCGTCTCCCTCCTT
CCCTCGACGCTCGCCCAGCCCCCCCCCAATACCACAAGCACGACCACGGG
AAGCCTCCGCAGCCTCCAAAGGGCTACCAACCCGTCCAACCTTACCGTAC
TGCTGCTGCCGCTGCTGTTGCCGCTGCTGTTGGCACGGAAGGCATGGAAG
AAGTTGTCCACCCTTCCGGGTCTCGTACCCTCCTTCCTGGGAGAGGAAGT
CTGAGGGAGGAAGGGAGGGAGGGAGGGCTAGGCTCAAGAGTGATTGAGTG
GGAAGAAGAGGTGGCGGCAGTGTCCGCCTCGTTCAAGAAGGCCATGGACG
GCTTCAACGCCAGCACAGCCAAGGAGACGACGGGGAACTATGACCCCTTC
TGGCCCGCCTGTCCCATTTTCGACGCCGCCAACGAGCTAGGAAGCAAGGC
CGGCTGTGGAGTGTTGAGCTTCTTCCGGCGCTTCGTCACGGATTTGCCGG
AGAACTATTCGCACCCGATGATGTTCCTTCCAGATGATCCCCAGCTGGAA
GACACCTACGCCGTACCTTTCGCTTTCGACGGCCGAGGGGCTGAGAAGAA
GAGGACGCTTCCCTTGACCCGCGTCGCGCCCGAGCTTCCCACCTACCATT
TATTGTACAGAGTCATCTTCTACTTGGTCAAGTACACCTTTCAGACGGAG
GATAACTTCATCGCCGGCCGCAAAATCCCTGAGCTTCCCACCATCGTGAA
GGGCTGGAAGGACCAGAGGCTGTATTGGTTCAATCTGCCTATCCGTGGCA
CCGACGATTTCAGGCTCACCCCGTACGCCCTGTCCATGGTGTCGGAGGAC
GGGTCCAAGATGATCTTCGTCACGCGCGGCACTCTGTGGCAGGAGGAGTG
GATTATGGACTTCGAGTACTCGTACAGCACCGATCCCCTGGCCGAGAAGC
TCTTTCCGGGGCACGTGCACAGCGGCATCTTCAAAATGTTCAACCTTATT
CAGGAGGAGGTCATCCAAGAGGTCCTCCGCGTCAACCCCAAGCACGTCCT
CGTCGGCGGCCATTCCCTCGGAGGAGCCGAAGCCATCCTCCACGGCTACA
ACATCCAACAAGTCTTGCAAAGAAAGGGGAAGAAGGAGGGCAAAGAAGCC
GGCAGGGTCGATACGGTGGCGATCGGAGCGCTGGAAGCAGGCGACCAGCA
TTTCGTAGACGGCGTGGCCGAGGTTCTGAACCAGCGCCACATGATCTATG
TGGGGGATGGGGCAGTGACAGCCACCGACAAGGATGGAAAGGAGGCAACA
GGAACGGAATACCGTATCGGAGATGTGTTTGCGCAATACACTTGCGGGGC
CTACATGGGCTGCGACTCCCTGGGCACCGGCCCCACAGGCGTCCGTTGGC
CGTACGCGCGTGCCTGGAACCAAGTCCCTTTTACGGCGCGCAACCTCCCC
AACACCGCCCGCTTCCAACAGGCAGAGAACCTCAGCCCTATCACGGGCGA
TCTGCCCGTGCCAAGCTTCCGGAACCTGGTCTCGGGGCACATCTGCTCGT
ACCAGTGCCTGTTTTCGACTTATGTGGGCGATAAGGACTTTAACCTCTGC
TCGTTCAAAGACCAGCAGCCGACGACGGGGGGGCTGCCGGACGAGAAGTT
GTGCTACTTCCCCGAATTGCCTTACTAGATTGGCGGGGTAGGGGGGGGAC
AGGGGGCTGGGTGTGTAGGTGTGGGTGTTTATGTGTTCGTGTGTGTGTTA
GTTGTCGACGACGTCGACTGTGCGCATCCCGCGTAGATGGCCGGAGTAGG
AGGCGGGGATGAGGAGGATGGGGGGCGCCTGGTGTGATTCGGCAGGCTGG
GAGATGAGGCATATGGAGAGAAGGGGAAGGCGGGAAAGTAGTCCGTCTAT
CCTTCTGGCTGGAATTCTATTATGTACTATATGTTGTGATGGAACGGTTT
GACAGGACAGGAAGGATATGAAGGAAGCGAAGGGGATTACCGGAGTGGTC
GTTATGGGCATGCTGCTAGAAGAGAGAGTGGGTGAGCATATGTACCAGGC
GCACCCGTCCCAGGGTTTGAGACGACCTAATTATTAACTCTGTTTCTATA
GGGTTGCTGGATTCGAAAGGGAGAAGCGGCGCGTGACAATTTTTGTTGAC
GACGCAAGGAAATGAATGAGAGTAGGACGGACCACATAGGCAATGGGGCA
AATGAAATAAAGATGGGATGAACCAGTGAAATATCTAGGGGAAGAGCAGA
GCATAGAAATCAGAGAAAGGCAAAAAAAGAAATACATATGAGCACACACG
CATGCACACA

protein sequence of NO30G00360.1

>NO30G00360.1-protein ID=NO30G00360.1-protein|Name=NO30G00360.1|organism=Nannochloropsis oceanica|type=polypeptide|length=652bp
MRSVSSAACRLDSSFPHRRVETQIIILIHRMARCLRFLPGQPWLTLRPPS
LPVLELLRSRSKHSFSSTHAQTLTRVHTHIIFSPQCLPSNQHGPASSSLP
LVPLLRLPPSLDARPAPPQYHKHDHGKPPQPPKGYQPVQPYRTAAAAAVA
AAVGTEGMEEVVHPSGSRTLLPGRGSLREEGREGGLGSRVIEWEEEVAAV
SASFKKAMDGFNASTAKETTGNYDPFWPACPIFDAANELGSKAGCGVLSF
FRRFVTDLPENYSHPMMFLPDDPQLEDTYAVPFAFDGRGAEKKRTLPLTR
VAPELPTYHLLYRVIFYLVKYTFQTEDNFIAGRKIPELPTIVKGWKDQRL
YWFNLPIRGTDDFRLTPYALSMVSEDGSKMIFVTRGTLWQEEWIMDFEYS
YSTDPLAEKLFPGHVHSGIFKMFNLIQEEVIQEVLRVNPKHVLVGGHSLG
GAEAILHGYNIQQVLQRKGKKEGKEAGRVDTVAIGALEAGDQHFVDGVAE
VLNQRHMIYVGDGAVTATDKDGKEATGTEYRIGDVFAQYTCGAYMGCDSL
GTGPTGVRWPYARAWNQVPFTARNLPNTARFQQAENLSPITGDLPVPSFR
NLVSGHICSYQCLFSTYVGDKDFNLCSFKDQQPTTGGLPDEKLCYFPELP
Y*

mRNA from alignment at chr30:156890..161834-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO30G00360.1 ID=NO30G00360.1|Name=NO30G00360.1|organism=Nannochloropsis oceanica|type=mRNA|length=4945bp|location=Sequence derived from alignment at chr30:156890..161834- (Nannochloropsis oceanica)
TTCTTTCCCATCCTTTCTCTCTTCTCTCAGAGAGACTCTCTACTAAGCTC
ACCTCTCTTCCTAACCCTTTCGTCTGTCGCATATCCCCACGACCAAAGCC
TCAATGAAAATTTATGTGTTGGTAAAATTGTAATTCTTGTCCATTCGCCC
GCTTTTCCCCTTTGCTCGTGGTGGCTAGCCAAGCTGCAGGGAGGGAGGCA
GAGGACGACGGAGCACACCCGCATGCGGTCGGTCTCCTCTGCTGCATGCC
GATTAGATTCATCATTCCCCCACCGACGCGTAGAGACGCAGATAATAATT
CTGATTCACAGGATGGCACGCTGTCTTCGATTTTTGCCGGGCCAGCCATG
GCTTACCTTGCGTCCCCCTTCGCTTCCTGTACTGGAGCTCCTCCGATCTC
GCTCCAAGCATTCATTCTCATCTACTCATGCGCAAACACTCACGCGCGTA
CACACACACATTATCTTTTCCCCTCAATGTTTGCCAAGCAATCAACATGG
CCCGGCTTCTTCTTCTCTCCCTCTTGTCCCTCTCCTCCGTCTCCCTCCTT
CCCTCGACGCTCGCCCAGCCCCCCCCCAATACCACAAGCACGACCACGGG
AAGCCTCCGCAGCCTCCAAAGGGCTACCAACCCGTCCAACCTTACCGTAC
TGCTGCTGCCGCTGCTGTTGCCGCTGCTGTTGGCACGGAAGGCATGGAAG
AAGTTGTCCACCCTTCCGGGTCTCGTACCCTCCTTCCTGGGAGAGGAAGT
CTGAGGGAGGAAGGGAGGGAGGGAGGGCTAGGCTCAAGAGTGATTGAGTG
GGAAGAAGAGGTGGCGGCAGTGTCCGCCTCGTTCAAGAAGGCCATGGACG
GCTTCAACGCCAGCACAGCCAAGGAGACGACGGGGAACTATGGTAAGCAA
GCAAGCAAGCAAGCCCTCCCTCCCTCCCTCCCTTTCTTGTTCTAAATGAC
ATTGGTATTAGCACGGCAAAAGCAAAGATAGACAATCTCGATAGAGAGAC
TCGATAAAGGGAGGGAGGGATGGAGGAATGGGCTGTTTCTGGAGAGTCAT
CAAGTCTAATGTACCCTTCTTTCCCCCCCTCCCTCCCCCCTCCCTCCCTC
CCTCCCTCCCCCTCAGACCCCTTCTGGCCCGCCTGTCCCATTTTCGACGC
CGCCAACGAGCTAGGAAGCAAGGCCGGCTGTGGAGTGTTGAGCTTCTTCC
GGCGCTTCGTCACGGATTTGCCGGAGAACTATTCGCACCCGATGATGTTC
CTTCCAGATGATCCCCAGGTGGGGAGGGAGGGAGGGAGGGAGGGAGGGAG
GGAGAAAGTGGTGGGTTTTAGGTATTTCCAGGCGCGTTGTTCTGACCCAT
AGAGATGCCTGCTTGCCGGCAGGTCCCTCCCCTCCCCTCCATCCTTCGCC
TCCTCACTCCCCAGCTAGAGGTTTCCCACGTTATGCCTTTCGGTTTCGAC
GGCCAAGCACAAGCACACACTTACACCCCTCCCTCCCTCCCTTCCTTCCT
CCCTCTCTTTTCAGCTGGAAGACACCTACGCCGTACCTTTCGCTTTCGAC
GGCCGAGGGGCTGAGAAGAAGAGGACGCTTCCCTTGACCCGCGTCGCGCC
CGAGCTTCCCACCTACCATTTATTGTACAGGTGAGGGAGGGAGGGAGGGA
GGGCGGGCGGGCAAGGGTGAAGGATGAGAGAATGTATTGGTTTGGAAGAG
GTAGGGAGATATGTTGCTTGTTTTGACGGGGTCGATGAGGCGGACGTGTG
ATGGGGAGGGAGGGAAGGAGGGAGGGAAGGAGGAGGGAAGGAGGGAGGGA
AGGAGGGAGGGAAGGAGGAGGGAAGGAGGGAGGAAGGGAGGGAGGGAGGG
GTCCTGGCTGTCTTACTGATGCATTTTCCCTCCTCTCTTTCGACAGAGTC
ATCTTCTACTTGGTCAAGTACACCTTTCAGACGGTGCGTGCTGGCGAAGG
AGGGCGAGAGAAAGGAGAAGGGAGGGAGGGAGGGCGGGAGGGTGGGAGGG
AGGGCGGGCGGGAGGAAAGGAGGGCTTACCTTGCCATTTTATAAAGTCTC
ATATGGCGACGACTGACTAAATCTAATAATCTATCAATCTATATATAATC
AATATTCTGATCTTCATCCAAACAGGAGGATAACTTCATCGCCGGCCGCA
AAATCCCTGAGCTTCCCACCATCGTGAAGGGTATGGCCTGCCTTACCTCC
CTCCCTCCCTTCCTCCCTCCCTTTCGTTATCGCAACCGGACTTCGTTATT
GCATTTCGCCCATTCCTTCTCTCCCTCCCTCCCTCCCTCCCTCCCTCCCT
CCCTCCCTCCCTCCCCAGGCTGGAAGGACCAGAGGCTGTATTGGTTCAAT
CTGCCTATCCGTGGCACCGACGATTTCAGGTAATCGACCCCCTTCCTTTC
CTCTCTTCCTCCTTCCCTCCTTCCATGCCTCCCTCCTTCCCTCGCTTTCT
TCCATCCTCTCTCTTCCCCTACTCTGAATAATAATAAATCCTTCTTCCAC
GTCACTTTGATTAACCAATGAACCAATGATTTTTTTTCATTCAAATATTT
CCTCATAGATATATTTTTACATGTGCATATACATGCATATAAATATGTCC
CAATGCTCGTCTCTATATATTCTCGACCCGTACGCCCTGTCCATAGTGCC
ACACGATGAAATATAAATTAATATGAACATATAAATACATATATATAAAT
ACATATATGTTTAAATATATATATGTACATATATATCCCTGTATAGGCTC
ACCCCGTACGCCCTGTCCATGGTGTCGGAGGACGGGTCCAAGATGATCTT
CGTCACGCGCGGCACTCTGTGGCAGGAGGAGTGGATTATGGACTTCGAGT
ACTCGTACAGCACCGATCCCCTGGCCGAGAAGCTCTTTCCGGGGCACGTG
CACAGCGGGTAGGGAGGGACGGAGGGAGGGAGAGACGGAGGGAGGGAGGG
AGGGGATCGGAGGGAGGGAGGGGACGGAGGGAGATAAGTGTGCGGGGGAG
GATATACTGAGTACTGACAATTTTTCCCTCTTATTCCTTCATCCTGTGGA
CGACAAACAGCATCTTCAAAATGTTCAACCTTATTCAGGAGGAGGTCATC
CAAGAGGTACGTCCATCCCTCTCCCTCTCTCCCTCTCCCTCGCCTCATTC
CCTCCCTCCGATTCAGATCGAGCCCGATTGGATGAAACCAGTGAGACCTA
CCAGCTCCCACCACTAACAAAATCCTCCTCCAAACTCCAACCGTCTTTCC
CTCCCTCCCTCCCTGTCTCCCTCCTTCCCTCCCTGTCTCTCTCCCTCCCT
CAGGTCCTCCGCGTCAACCCCAAGCACGTCCTCGTCGGCGGCCATTCCCT
CGGAGGAGCCGAAGCCATCCTCCACGGCTACAACATCCAACAAGTCTTGC
AAAGAAAGGGGAAGAAGGAGGGCAAAGAAGCCGGCAGGGTCGATACGGTG
GCGATCGGAGCGCTGGAAGCAGGTAGGAAAAGAGGGAGGGAGGAAGGGAG
GGAGGGAGGGCGGGAGGGAGGGAGGGAGGGAGGGGATGATCTGTGATGTT
CCTCGCATTGTCGCGCCCAATCCGTCCCCCGCTTTTACTAGTGCTGATTT
CAAATCCCTCCCTCCTTAACCCCCTCCCTCCCTGCCTGTCTTGCTCCCTC
TGCGCTACAGGCGACCAGCATTTCGTAGACGGCGTGGCCGAGGTTCTGAA
CCAGCGCCACATGATCTATGTGGGGGATGGGGCAGTGACAGCCACCGACA
AGGATGGAAAGGAGGCAACAGGAACGGAATACCGTATCGGAGATGTGTTT
GCGCAATACACTTGCGGGTAAGAAGGAGGGAGGGAGGGGCGGACGGACGG
AGGGACGGAGGGACGGAGGGATGCCTTGCCCTACGACCCTCAGTACCTTG
TACGGCACGCCACGAGTCTAAATAGGCCCTCCCCTTTCTCCCTCCCTCCC
TCGGCCCCTCCTCCATTTCCGCTCTCGTCTAGGGCCTACATGGGCTGCGA
CTCCCTGGGCACCGGCCCCACAGGCGTCCGTTGGCCGTACGCGCGTGCCT
GGAACCAAGTCCCTTTTACGGCGCGCAACCTCCCCAACACCGCCCGCTTC
CAACAGGCAGAGAACCTCAGCCCTATCACGGGCGATCTGCCCGTGCCAAG
CTTCCGGAACCTGGTCTCGGGGCACATCTGCTCGTACCAGTGCCTGTTTT
CGACTTATGTGGGCGATAAGGACTTTAACCTCTGCTCGTTCAAAGACCAG
CAGCCGACGACGGGGGGGCTGCCGGACGAGAAGTTGTGCTACTTCCCCGA
ATTGCCTTACTAGATTGGCGGGGTAGGGGGGGGACAGGGGGCTGGGTGTG
TAGGTGTGGGTGTTTATGTGTTCGTGTGTGTGTTAGTTGTCGACGACGTC
GACTGTGCGCATCCCGCGTAGATGGCCGGAGTAGGAGGCGGGGATGAGGA
GGATGGGGGGCGCCTGGTGTGATTCGGCAGGCTGGGAGATGAGGCATATG
GAGAGAAGGGGAAGGCGGGAAAGTAGTCCGTCTATCCTTCTGGCTGGAAT
TCTATTATGTACTATATGTTGTGATGGAACGGTTTGACAGGACAGGAAGG
ATATGAAGGAAGCGAAGGGGATTACCGGAGTGGTCGTTATGGGCATGCTG
CTAGAAGAGAGAGTGGGTGAGCATATGTACCAGGCGCACCCGTCCCAGGG
TTTGAGACGACCTAATTATTAACTCTGTTTCTATAGGGTTGCTGGATTCG
AAAGGGAGAAGCGGCGCGTGACAATTTTTGTTGACGACGCAAGGAAATGA
ATGAGAGTAGGACGGACCACATAGGCAATGGGGCAAATGAAATAAAGATG
GGATGAACCAGTGAAATATCTAGGGGAAGAGCAGAGCATAGAAATCAGAG
AAAGGCAAAAAAAGAAATACATATGAGCACACACGCATGCACACA

Coding sequence (CDS) from alignment at chr30:156890..161834-

>NO30G00360.1 ID=NO30G00360.1|Name=NO30G00360.1|organism=Nannochloropsis oceanica|type=CDS|length=1956bp|location=Sequence derived from alignment at chr30:156890..161834- (Nannochloropsis oceanica)
ATGCGGTCGGTCTCCTCTGCTGCATGCCGATTAGATTCATCATTCCCCCA
CCGACGCGTAGAGACGCAGATAATAATTCTGATTCACAGGATGGCACGCT
GTCTTCGATTTTTGCCGGGCCAGCCATGGCTTACCTTGCGTCCCCCTTCG
CTTCCTGTACTGGAGCTCCTCCGATCTCGCTCCAAGCATTCATTCTCATC
TACTCATGCGCAAACACTCACGCGCGTACACACACACATTATCTTTTCCC
CTCAATGTTTGCCAAGCAATCAACATGGCCCGGCTTCTTCTTCTCTCCCT
CTTGTCCCTCTCCTCCGTCTCCCTCCTTCCCTCGACGCTCGCCCAGCCCC
CCCCCAATACCACAAGCACGACCACGGGAAGCCTCCGCAGCCTCCAAAGG
GCTACCAACCCGTCCAACCTTACCGTACTGCTGCTGCCGCTGCTGTTGCC
GCTGCTGTTGGCACGGAAGGCATGGAAGAAGTTGTCCACCCTTCCGGGTC
TCGTACCCTCCTTCCTGGGAGAGGAAGTCTGAGGGAGGAAGGGAGGGAGG
GAGGGCTAGGCTCAAGAGTGATTGAGTGGGAAGAAGAGGTGGCGGCAGTG
TCCGCCTCGTTCAAGAAGGCCATGGACGGCTTCAACGCCAGCACAGCCAA
GGAGACGACGGGGAACTATGACCCCTTCTGGCCCGCCTGTCCCATTTTCG
ACGCCGCCAACGAGCTAGGAAGCAAGGCCGGCTGTGGAGTGTTGAGCTTC
TTCCGGCGCTTCGTCACGGATTTGCCGGAGAACTATTCGCACCCGATGAT
GTTCCTTCCAGATGATCCCCAGCTGGAAGACACCTACGCCGTACCTTTCG
CTTTCGACGGCCGAGGGGCTGAGAAGAAGAGGACGCTTCCCTTGACCCGC
GTCGCGCCCGAGCTTCCCACCTACCATTTATTGTACAGAGTCATCTTCTA
CTTGGTCAAGTACACCTTTCAGACGGAGGATAACTTCATCGCCGGCCGCA
AAATCCCTGAGCTTCCCACCATCGTGAAGGGCTGGAAGGACCAGAGGCTG
TATTGGTTCAATCTGCCTATCCGTGGCACCGACGATTTCAGGCTCACCCC
GTACGCCCTGTCCATGGTGTCGGAGGACGGGTCCAAGATGATCTTCGTCA
CGCGCGGCACTCTGTGGCAGGAGGAGTGGATTATGGACTTCGAGTACTCG
TACAGCACCGATCCCCTGGCCGAGAAGCTCTTTCCGGGGCACGTGCACAG
CGGCATCTTCAAAATGTTCAACCTTATTCAGGAGGAGGTCATCCAAGAGG
TCCTCCGCGTCAACCCCAAGCACGTCCTCGTCGGCGGCCATTCCCTCGGA
GGAGCCGAAGCCATCCTCCACGGCTACAACATCCAACAAGTCTTGCAAAG
AAAGGGGAAGAAGGAGGGCAAAGAAGCCGGCAGGGTCGATACGGTGGCGA
TCGGAGCGCTGGAAGCAGGCGACCAGCATTTCGTAGACGGCGTGGCCGAG
GTTCTGAACCAGCGCCACATGATCTATGTGGGGGATGGGGCAGTGACAGC
CACCGACAAGGATGGAAAGGAGGCAACAGGAACGGAATACCGTATCGGAG
ATGTGTTTGCGCAATACACTTGCGGGGCCTACATGGGCTGCGACTCCCTG
GGCACCGGCCCCACAGGCGTCCGTTGGCCGTACGCGCGTGCCTGGAACCA
AGTCCCTTTTACGGCGCGCAACCTCCCCAACACCGCCCGCTTCCAACAGG
CAGAGAACCTCAGCCCTATCACGGGCGATCTGCCCGTGCCAAGCTTCCGG
AACCTGGTCTCGGGGCACATCTGCTCGTACCAGTGCCTGTTTTCGACTTA
TGTGGGCGATAAGGACTTTAACCTCTGCTCGTTCAAAGACCAGCAGCCGA
CGACGGGGGGGCTGCCGGACGAGAAGTTGTGCTACTTCCCCGAATTGCCT
TACTAG

Synonyms

Publications