NO30G00330, NO30G00330 (gene) Nannochloropsis oceanica

Overview
NameNO30G00330
Unique NameNO30G00330
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3459
Alignment locationchr30:132401..135859 -

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Properties
Property NameValue
DescriptionMAP kinase kinase 2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr30genomechr30:132401..135859 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006468protein phosphorylation
GO:0016310phosphorylation
GO:0006468protein phosphorylation
Vocabulary: Molecular Function
TermDefinition
GO:0004672protein kinase activity
GO:0005524ATP binding
GO:0016301kinase activity
GO:0005524ATP binding
GO:0004672protein kinase activity
Vocabulary: INTERPRO
TermDefinition
IPR011009Kinase-like_dom
IPR000719Prot_kinase_dom
Homology
BLAST of NO30G00330 vs. NCBI_GenBank
Match: CBJ26035.1 (Mitogen-activated protein kinase kinase (MAP2K) [Ectocarpus siliculosus])

HSP 1 Score: 122.1 bits (305), Expect = 3.600e-24
Identity = 59/143 (41.26%), Postives = 90/143 (62.94%), Query Frame = 0
Query:    1 MSPERIDGQDYSYASDVWSLGLALMTVALGKLPISTKAGYWSILQSVRDEPPPTLP-EGHWSPLFRDFLSRFLRKDPASRPPCSSLLLHPWLEQARSQHHSGGCVTAVPLHGDNQTSRETEAKEELRAIVSAVKEHVAGVLRE 143
            MSPERI+G +YSY++DVWSLGL ++T ALG+LP  T  GYW +L  +RD   PTLP +G WS  FR+FL   L K+P  RP CS+L+   ++ +A +    G   +        + ++ET   EEL + ++ + EHV+ ++++
Sbjct:  570 MSPERINGDEYSYSADVWSLGLMMLTTALGRLPFETNKGYWGVLHCIRDADAPTLPADGPWSSEFREFLRLCLEKNPERRPTCSALMETAFIRRASAAWEPGTTRSCWVNELSERKTQETRV-EELESTLATIAEHVSSLIKD 711          
BLAST of NO30G00330 vs. NCBI_GenBank
Match: CCI40930.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 122.1 bits (305), Expect = 3.600e-24
Identity = 56/108 (51.85%), Postives = 76/108 (70.37%), Query Frame = 0
Query:    1 MSPERIDGQDYSYASDVWSLGLALMTVALGKLPISTKAGYWSILQSVRDEPPPTLPEGHWSPLFRDFLSRFLRKDPASRPPCSSLLLHPWLEQARSQHHSGGCVTAVP 109
            MSPERI  ++YSY SDVWSLGL+++T ALGK P S+K GYW +L  +R+EPPP LP+  +S  FRDF+++ L K+ A R     LLLHP++ Q+  ++H   C TA P
Sbjct:  771 MSPERIASEEYSYKSDVWSLGLSILTCALGKFPYSSKNGYWELLHKIRNEPPPMLPKDSFSNTFRDFMAKCLAKNEAERWTVQQLLLHPFVRQSSRKNH---CSTANP 875          
BLAST of NO30G00330 vs. NCBI_GenBank
Match: POM76164.1 (STE/STE7 protein kinase [Phytophthora palmivora var. palmivora])

HSP 1 Score: 121.3 bits (303), Expect = 6.200e-24
Identity = 65/146 (44.52%), Postives = 85/146 (58.22%), Query Frame = 0
Query:    1 MSPERIDGQDYSYASDVWSLGLALMTVALGKLPISTKAGYWSILQSVRDEPPPTLPEGHWSPLFRDFLSRFLRKDPASRPPCSSLLLHPWLEQARSQHHSGGCVTAVPLHGDNQTSRETEA-----------KEELRAIVSAVKEH 136
            MSPERI  ++YSY SDVWS GL++MT ALGK P S++ GYW +L  +R+EPPP LPEG +S LF DFL + L+KD   R     LL H ++E+        G  TA P  G  +T+ E +A           + E+  IV  V EH
Sbjct:  158 MSPERIASEEYSYKSDVWSFGLSIMTCALGKFPYSSRGGYWELLHMIRNEPPPRLPEGEFSDLFCDFLEKCLKKDQTERWSVKQLLKHEFIER------YCGDQTATPSPGSRRTTDEDDADSKNVEDESKEQAEVDEIVQKVAEH 297          
BLAST of NO30G00330 vs. NCBI_GenBank
Match: XP_024573341.1 (Mitogen-activated protein kinase kinase (MAP2K) [Plasmopara halstedii] >CEG36972.1 Mitogen-activated protein kinase kinase (MAP2K) [Plasmopara halstedii])

HSP 1 Score: 118.6 bits (296), Expect = 4.000e-23
Identity = 68/145 (46.90%), Postives = 86/145 (59.31%), Query Frame = 0
Query:    1 MSPERIDGQDYSYASDVWSLGLALMTVALGKLPISTKAGYWSILQSVRDEPPPTLPEGHWSPLFRDFLSRFLRKDPASRPPCSSLLLHPWLEQARSQHHSGGCVTAVPLHGDNQT-SRETEAKEELRA--IVSAVKEHVAGVLRE 143
            MSPERI  ++YSY SDVWS GL++MT ALGK P  ++ GYW +L  +R+EPPP LPEG +S LF DFL++ L KD   R     LL H ++     Q H G    AV    +N T S E + KE+L    IV  V EH A   +E
Sbjct: 4154 MSPERIASEEYSYKSDVWSFGLSIMTCALGKFPYLSRGGYWEMLHMIRNEPPPQLPEGEFSDLFCDFLAKCLTKDQTERWSVKKLLEHEFI-----QRHCGN-EKAVDCANENDTKSIEDDRKEQLEVDEIVRKVAEHYAKDAKE 4292          
BLAST of NO30G00330 vs. NCBI_GenBank
Match: OWZ22059.1 (STE/STE7 protein kinase [Phytophthora megakarya])

HSP 1 Score: 118.6 bits (296), Expect = 4.000e-23
Identity = 63/146 (43.15%), Postives = 84/146 (57.53%), Query Frame = 0
Query:    1 MSPERIDGQDYSYASDVWSLGLALMTVALGKLPISTKAGYWSILQSVRDEPPPTLPEGHWSPLFRDFLSRFLRKDPASRPPCSSLLLHPWLEQARSQHHSGGCVTAVPLHGDNQTSRETEA-----------KEELRAIVSAVKEH 136
            MSPERI  ++YSY SDVWS GL++MT ALGK P S++ GYW +L  +R+EPPP LPEG +S LF DFL + L+KD   R     LL H ++++        G  T  P  G  +T+ E +A           + E+  IV  V EH
Sbjct:  339 MSPERIASEEYSYKSDVWSFGLSIMTCALGKFPYSSRGGYWELLHMIRNEPPPRLPEGEFSDLFCDFLDKCLKKDQTERWSVKQLLKHEFIQR------YCGNQTTTPSPGSRRTTDEDDAGTKNVEDESKEQAEVDEIVQKVAEH 478          
BLAST of NO30G00330 vs. NCBI_GenBank
Match: XP_008902502.1 (STE/STE7 protein kinase [Phytophthora parasitica INRA-310] >ETI51530.1 STE/STE7 protein kinase [Phytophthora parasitica P1569] >ETK91429.1 STE/STE7 protein kinase [Phytophthora parasitica] >ETL44839.1 STE/STE7 protein kinase [Phytophthora parasitica] >ETM51155.1 STE/STE7 protein kinase [Phytophthora parasitica] >ETN12544.1 STE/STE7 protein kinase [Phytophthora parasitica INRA-310] >ETO80291.1 STE/STE7 protein kinase [Phytophthora parasitica P1976] >ETP21318.1 STE/STE7 protein kinase [Phytophthora parasitica CJ01A1] >ETP49244.1 STE/STE7 protein kinase [Phytophthora parasitica P10297])

HSP 1 Score: 115.9 bits (289), Expect = 2.600e-22
Identity = 65/142 (45.77%), Postives = 84/142 (59.15%), Query Frame = 0
Query:    1 MSPERIDGQDYSYASDVWSLGLALMTVALGKLPISTKAGYWSILQSVRDEPPPTLPEGHWSPLFRDFLSRFLRKDPASRPPCSSLLLHPWL-----EQARSQHHSGGCVTAVPLHGDNQTSRETEAKE--ELRAIVSAVKEH 136
            MSPERI  ++YSY SDVWS GL++MT ALGK P S++ GYW +L  +R+EPPP LPEG +S LF DFL + L+KD   R     LL H ++     +QA SQ       T      D+  S E ++KE  E+  IV  V  H
Sbjct:  454 MSPERIASEEYSYKSDVWSFGLSIMTCALGKFPYSSRGGYWELLHMIRNEPPPRLPEGEFSDLFCDFLDKCLKKDQTERWSVKQLLKHEFIQRYCGDQAASQ-------TRRSADEDDAKSVEDDSKEQAEVDEIVQKVALH 588          
BLAST of NO30G00330 vs. NCBI_GenBank
Match: ETL97994.1 (STE/STE7 protein kinase [Phytophthora parasitica])

HSP 1 Score: 115.9 bits (289), Expect = 2.600e-22
Identity = 65/142 (45.77%), Postives = 84/142 (59.15%), Query Frame = 0
Query:    1 MSPERIDGQDYSYASDVWSLGLALMTVALGKLPISTKAGYWSILQSVRDEPPPTLPEGHWSPLFRDFLSRFLRKDPASRPPCSSLLLHPWL-----EQARSQHHSGGCVTAVPLHGDNQTSRETEAKE--ELRAIVSAVKEH 136
            MSPERI  ++YSY SDVWS GL++MT ALGK P S++ GYW +L  +R+EPPP LPEG +S LF DFL + L+KD   R     LL H ++     +QA SQ       T      D+  S E ++KE  E+  IV  V  H
Sbjct:  453 MSPERIASEEYSYKSDVWSFGLSIMTCALGKFPYSSRGGYWELLHMIRNEPPPRLPEGEFSDLFCDFLDKCLKKDQTERWSVKQLLKHEFIQRYCGDQAASQ-------TRRSADEDDAKSVEDDSKEQAEVDEIVQKVALH 587          
BLAST of NO30G00330 vs. NCBI_GenBank
Match: KUF87748.1 (Mitogen-activated protein kinase kinase 6 [Phytophthora nicotianae])

HSP 1 Score: 115.9 bits (289), Expect = 2.600e-22
Identity = 65/142 (45.77%), Postives = 84/142 (59.15%), Query Frame = 0
Query:    1 MSPERIDGQDYSYASDVWSLGLALMTVALGKLPISTKAGYWSILQSVRDEPPPTLPEGHWSPLFRDFLSRFLRKDPASRPPCSSLLLHPWL-----EQARSQHHSGGCVTAVPLHGDNQTSRETEAKE--ELRAIVSAVKEH 136
            MSPERI  ++YSY SDVWS GL++MT ALGK P S++ GYW +L  +R+EPPP LPEG +S LF DFL + L+KD   R     LL H ++     +QA SQ       T      D+  S E ++KE  E+  IV  V  H
Sbjct: 4587 MSPERIASEEYSYKSDVWSFGLSIMTCALGKFPYSSRGGYWELLHMIRNEPPPRLPEGEFSDLFCDFLDKCLKKDQTERWSVKQLLKHEFIQRYCGDQAASQ-------TRRSADEDDAKSVEDDSKEQAEVDEIVQKVALH 4721          
BLAST of NO30G00330 vs. NCBI_GenBank
Match: CCA21456.1 (serine/threonine protein kinase putative [Albugo laibachii Nc14])

HSP 1 Score: 113.2 bits (282), Expect = 1.700e-21
Identity = 57/124 (45.97%), Postives = 78/124 (62.90%), Query Frame = 0
Query:    1 MSPERIDGQDYSYASDVWSLGLALMTVALGKLPISTKAGYWSILQSVRDEPPPTLPEGHWSPLFRDFLSRFLRKDPASRPPCSSLLLHPWLEQ-ARSQHHSGGCVTAVPLHGDNQTSRETEAKE 124
            MSPERI  ++YSY SDVWSLGL+L+T ALG+ P S++ GYW +L  +R+EPPP LP G +S  FRDF+ + L K+   R     LL HP+++Q AR+  H+             QT  E EA++
Sbjct:  282 MSPERIASEEYSYKSDVWSLGLSLLTCALGEFPYSSRNGYWELLHKIRNEPPPILPRGSFSVTFRDFMEKCLAKNEVERWNVKQLLDHPFIKQLARTDCHTSNATEYY------QTLIEAEAQQ 399          
BLAST of NO30G00330 vs. NCBI_GenBank
Match: XP_008616976.1 (STE/STE7 protein kinase [Saprolegnia diclina VS20] >EQC29672.1 STE/STE7 protein kinase [Saprolegnia diclina VS20])

HSP 1 Score: 113.2 bits (282), Expect = 1.700e-21
Identity = 62/143 (43.36%), Postives = 78/143 (54.55%), Query Frame = 0
Query:    1 MSPERIDGQDYSYASDVWSLGLALMTVALGKLPISTKAGYWSILQSVRDEPPPTLPEGH-WSPLFRDFLSRFLRKDPASRPPCSSLLLHPWLEQARSQHHSGGCVTAVPLHGDNQTSRETEAKEELRAIVSAVKEHVAGVLRE 143
            MSPERI  + YSY SDVWS GL++MT ALG  P +TK GYW +L S+R+EPPP LP    +S  FRDFL + L KD   R     LL H +L + R +    G  T     G      + E+  EL  IV  + +H     RE
Sbjct:  505 MSPERIASEAYSYKSDVWSFGLSIMTCALGHYPYATKGGYWELLHSIRNEPPPKLPSSSGFSGDFRDFLDKCLAKDQNDRWSVKQLLEHNFLRECRCEF---GAATPFAARGKGDDEDDAESSLELDVIVPKLMDHYFKAARE 644          
The following BLAST results are available for this feature:
BLAST of NO30G00330 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
CBJ26035.13.600e-2441.26Mitogen-activated protein kinase kinase (MAP2K) [E... [more]
CCI40930.13.600e-2451.85unnamed protein product [Albugo candida][more]
POM76164.16.200e-2444.52STE/STE7 protein kinase [Phytophthora palmivora va... [more]
XP_024573341.14.000e-2346.90Mitogen-activated protein kinase kinase (MAP2K) [P... [more]
OWZ22059.14.000e-2343.15STE/STE7 protein kinase [Phytophthora megakarya][more]
XP_008902502.12.600e-2245.77STE/STE7 protein kinase [Phytophthora parasitica I... [more]
ETL97994.12.600e-2245.77STE/STE7 protein kinase [Phytophthora parasitica][more]
KUF87748.12.600e-2245.77Mitogen-activated protein kinase kinase 6 [Phytoph... [more]
CCA21456.11.700e-2145.97serine/threonine protein kinase putative [Albugo l... [more]
XP_008616976.11.700e-2143.36STE/STE7 protein kinase [Saprolegnia diclina VS20]... [more]

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Relationships

The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO30G00330.1NO30G00330.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO30G00330.1NO30G00330.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO30G00330 ID=NO30G00330|Name=NO30G00330|organism=Nannochloropsis oceanica|type=gene|length=3459bp
GGAGGGAGGGAGGGAAGGAAAGAGGGAGGAAGGGAGGGAGGGAGAGGTCT
TAAATAAAGCTTCTCTCCCCTGTCGTCACCTCTTCCTCCCTCCCTCCTCC
CCTCCCTCCCCTCAGGCACGGTGACATACATGTCTCCCGAGAGGATCGAT
GGACAAGACTACAGCTACGCATCCGACGTATGGAGgtaggatctctgccc
tccttccctccctccttccctccctccttccctccttctctcttctcctc
cccttctcccttccttccttgtccacttgcctacaagctgatggttctct
tccctccctccctccctccctccctccctccctccctccctccctccctc
cctccctccctccctccctccctccctccctccctccctccctccctccc
tccctcagTCTGGGCTTGGCCCTCATGACCGTCGCGCTCGGCAAGCTCCC
CATCTCCACCAAGGCCGGgtacgccctccctccctccctccctccctccc
tccctccctccctccctccttccctccctcctttcctcgagctctctcac
ccatccccctcccttctctcccttcccttcctcccttcctccctctccat
cagGTATTGGTCTATTTTGCAGTCTGTCAGAGACGAGCCTCCGCCGACAC
TTCCCGAGGgtgagcaaaagggaggaagggagggagggagggagagaggg
agggagagagggaagaattgagaggagaaatagattagaagagtgtaaat
ttcctcctctttttgttcgccctggccacgctttcgatgccctccctccc
tccctccctctctccctccctccctccctccctccctccctccctcccca
tcagGCCACTGGTCCCCGCTCTTCCGCGACTTCCTCTCTCGCTTCCTCCG
AAAGGATCCGGCTTCCCGCCCTCCCTGCTCCTCCCTCCTCCTCCACCCCT
GGCTCGAGCAAGCGCGAAGCCAACACCACAGCGGCGGCTGCGTGACTGCC
Ggtacgtcctccctccctccctccctccctccctccctctgctcgacgat
gtccgcactacccaaagtgagaggcttagagagacctcaccctccctccc
tcgctcctgcagTCCCTCTGCACGGTGACAACCAAACGTCCCGGGAGACA
GAGGCAAAGGAAGAATTGAGAGCCATCGTTTCAGCTGTCAAAGAACACGT
TGCAGGCGTCCTGAGGGAAGAGAGgtagggaaggagggggggggagggag
ggcgccggcagtcaaagaaaaaaagagcgcgaaggaggggaaagatatag
gtaggggaggagggagggtgggaaggggtggtaagaaggaggaagggggg
gaaggagggctagatagaagcatacagaagggagggagggaaggagggag
gaaaggaagcataggacggaaggagggagggagggaggcagggagggaag
gaaggagggagggcgactctctttggcatccacaactccttttgtcatca
cttcagactctaactttccctccctccctctctccctccccctttccctc
ctcaagCGCCGTCATCACTTCATCGCTGTCCTCTTCCTCTTCTTCCTTCT
CAGGAAGGGAGGGAGGGAGGGAGGGAGGGAGGGGTGGGCATGTCCCCCCT
CCTTACCACCGTCAGTTCTCCTCCCTCGTCGTGCTCGCCAACGATGACCT
CCTACAGCAACACCTCTACACCTCCACGCCCAGGGCCAGCGAGGGCCGCC
GTCCCTCTCTCCCTCCCTCCCTCCCTCTCTCCCATCCTCCCTCCACCCTG
AGCCCTCGTGGACATGAAGGAGAAGAAGGAGGAGGTGGAGGAGGCAAAGC
TGTCCCTCCTCCTTCTCCCCCTCCCTCCGCTGTCACCACAGCCAACCCTC
CTGGACTGATTTCCCAAGAAGGGGAAGACGGGAGGGAGGGAGGGGGGGAG
GGAGGGCAGACGTTCTCGTTCTGTAGCCCTCCACTGTCTCCTTCTCCCTC
TGTGCAGCTGTCGGCCGATAACGTGGGGGTGGATGACATGCTGAGGAAAA
TTCTCTTGGAGAGgtatagagggagggagggagggagagagggaggaagg
gagggagggagggaagaagggagggaagaagggagggagggagggggggg
gcggagggaggaaggagaggtgtacattttcaattgattcttctacacga
cttgatccctccctccctccctccctctctccctctctctctccctccct
ctgtccttccctcccagGGGCGAGGGTCGCCTGTATGAGTTCGCGGCACA
GCTTCGGATGGAACCTCGTCTCGTAGTGAAGGAAATTGAAGGAATCCTCC
TCGCTGCTGCTGCCGGTACTGGTGGGGGTGGGAGCCTTTCCTCTGCCCCT
CCCTTGTCATCTTCCTCTTCGTTGCCTCCTCCGTTGTAGGGGATGGGTGG
TGCCGGAGGGAAATGAGGGGGGGTAAGAGGATACAAAGGTAATGATAGTG
GTGGTGGAGGAGGAGGAGGTGGCGGAGGAGGAAGAGGAGGAGGATCGCTG
TAGCCTTATGTGAGAATGAAGGAGTAAATTAGAGGAGAAGGAGGATTAAA
AGAACGACAGGGAGGGGGAAATGGATAGAAAGGAAGAGGAGGGAAAGTGA
GCGAGAAAGAGAGGAGGGAAACGTGGCGGGAAGAGAGCGAAGTGACAATA
ATGTGTACAGCTGTAAGATAGAGAGATATTAGGGCAATTTCAAAAAGAAG
AAGTATCTCGTGTTTTGTGTCTGCTTTTATCCTTCGTGGGGGTAGTCCTC
GCTCATGTACTCGTGATGAGTGCCTGGGTAGATGAGAGAAGAGAAGGAAG
GGTCCTCTGAATTCCTTATTCTTCCACTCGCTTGCCTTATGTCCTTGATT
CTCTATATCCCTTATTCAGCTTAACTGTTTGTGCCTTCGTTGAGCCTGCA
GGGAGGAATGCATGGGAGAGTGGGCAAGGAAGGTTTATTTCGGAGAGTTT
CGGAAGCTTTTTATTTTGTCCCCCTACTTTAAGGGGTCTCTTGCTTTATG
CTATTTTTACAGTATATGACTGCGGACGTGTGTAGATAGGAGGGAATGTC
TCACATTTGCGGGCTTAGTGGTGGGCTGGAGAAGCGATAAGGAGAGGAGC
TCAGTCCAGAGGAGCTGCGCGCTGGAGTGAGGGACAAATTTCATTGATGG
AGCACCGGAATATACCGACAGAATAGAATGTATATAAATCATCGGTAACT
GCGGTTGCATGTCCTTTTCCTCGTCTTGCAGGTCGCCTACGTGTGGTGCA
TAAAAGTGGAATGGCCCTACGTTCCTTCCTCGTGCTTCAAATGACCTCCT
GCCTTTCCTTCCTCCCTCCCTCCCTTCCATTTCCTGTCCGCATGCATACC
GACACAACGTTCCCTTCGATCACACACACATACGTAGAGGCACGACACAA
GCATCGACG
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protein sequence of NO30G00330.1

>NO30G00330.1-protein ID=NO30G00330.1-protein|Name=NO30G00330.1|organism=Nannochloropsis oceanica|type=polypeptide|length=370bp
MSPERIDGQDYSYASDVWSLGLALMTVALGKLPISTKAGYWSILQSVRDE
PPPTLPEGHWSPLFRDFLSRFLRKDPASRPPCSSLLLHPWLEQARSQHHS
GGCVTAVPLHGDNQTSRETEAKEELRAIVSAVKEHVAGVLREESAVITSS
LSSSSSSFSGREGGREGGRGGHVPPPYHRQFSSLVVLANDDLLQQHLYTS
TPRASEGRRPSLPPSLPLSHPPSTLSPRGHEGEEGGGGGGKAVPPPSPPP
SAVTTANPPGLISQEGEDGREGGGEGGQTFSFCSPPLSPSPSVQLSADNV
GVDDMLRKILLERGEGRLYEFAAQLRMEPRLVVKEIEGILLAAAAGTGGG
GSLSSAPPLSSSSSLPPPL*
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Synonyms
Publications