NO30G00310, NO30G00310 (gene) Nannochloropsis oceanica

Overview
NameNO30G00310
Unique NameNO30G00310
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2381
Alignment locationchr30:126987..129367 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr30genomechr30:126987..129367 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO30G00310 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
Relationships

The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO30G00310.1NO30G00310.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO30G00310.1NO30G00310.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO30G00310 ID=NO30G00310|Name=NO30G00310|organism=Nannochloropsis oceanica|type=gene|length=2381bp
ATGAAAAAACCTTCGCCGCGTGGCGCTGCCGGTGCCTCCTTTGTCTTCGT
GTGCGTCTTCCTGTTCTCGTCTTCTTCCGTCCTCGTCGATGGCAGTGCTC
TCCGTGGTTCTAGTGAGgtacgtctaattttgtcagtaatactacatgtg
ggtgtatgtgtatgtgcacgggagggagagagagacggaggaggactgtg
gtgcgtggcttgcaccagcatgacaagggtacactccctcgaagcgaggg
agtcggggattgcctgatacggagaaaatctcgtaagacaaaaagagagg
aggaaaagctatagcacaggcatgaaaattgtgtgtgcaaatgtctatga
gtgctcgtgtgtgcctctgcgtatgtgtgaggaggaaagaatagagggga
aaactaggaggaaggtaaagagaaaggtctcccccttttcagcgcaagtg
ccgcccccttcattctctctctgttttaccacgactcccggccctccatc
cctccatcacttttccctcccttctttcccctcttccactcgtcgcccct
cttgtccagtgaacaaccttcaatatcttctaccatacaagcaatccaca
ctcatcctccctccctccctccctccctccctccctccctccccgtgcag
TCCCTCCTTCTTGACGACGGTGACGCGGGTGCATTAAAAGAGCCTCCTTT
AGCGTACTTCCCCCATCATGGGGATGACCGAGAGAATAGCGGGCGGCGAG
TGCGAGgtacgtctctccctttttttgctccctctttccctccctccttc
ccctgttcccctacttgcttgcctgtctccctcccttcccgtcttctacc
cttcttatcccccccctgttctcgtcatggatgcgtctacatcttttttc
ttctcctacttccacatgtccgtgctccagctcaccctccctcctttctc
cctccttccctccctccttccctccctccctccctcccagGTCTGTCCAA
CCGCGCACTCGCCCCCATCTCCCCCGAGCTCGTGAAGGAGGAGAACCAAG
GCTACGTCGAAgtaagtgtgaatcctccttccttccctccctccgttcct
atcatcctgcactctgttctacttgctcacatccccccccccgccctccc
tcccgccctccatctctccctctctccccggcagGCAAAGACTTCTCCTA
TAGTGGTTAAGGCCCCGGAAGAGGCCGCCAAGGATCCTCTCCGTCTCCCC
GGAGGCAAGCAGgtacgtacctgccctcttcctctccctctctcttccgt
gtcatctgtctttatctcaccctccctctctctgtccctccctccctccg
tccgtccctccctccctcccagggccctgtcgaaggcgccaaggatcctc
tccgtctccccggaggcaagcaggtacgtgcttgccctctatccctccct
ccctccttccctccctccctcttctgtatcacttgtcttaatcttatcct
aacctcctcaccccccctcctccgtccctccctccctccctcgcagGGCC
CTGTCGAAGGCGCCAAGGATCCTCTCCGTCTCCCCGGAGGCAAGCAGgta
cgtgctttccctctatccctccctccgtccctccctccctctctcaactg
tatcacttgtctaaatcttatcctaccctcctcaccccccctcctccgtc
cctccctccctcctcccccagGGCCCTGTCGAAGGCGCCAAGGATCCTCT
CCGTCTCCCCGGAGGCAAGCAGgtacgtgcttgccctctatccctccctc
cgtccctccctccctccctcttctgtatcacttgtctgaatcttatccta
acctcctccccccgcctccttcgtccctccctccctccctcccagGGCCC
TGTTGAAGGCGCCAAGGATCCTCTCCGTCTCCCCGGAGGCAAGCAGgtac
gtgcttgccctctatccctccctccgtccctccctccctccctcttctgt
atcacttgtctaaatcttatcctaacctcctcaccccccctcctccgtcc
ctccctccctccctcccagGGCCCTGTTGAAGGCGCCAAGGATCCTCTCC
GTCTCCCCGGAGGCAAGCAGgtacgtacctgccctctctctattcccccc
tccctccctccctccctccctccctccctccctccctccctccccatctc
gctcccaatctcctcatctttttacccgtgcgccctccctcccccctccc
tccctccctccctccctccctccgtccatcagGCCCCTGTGATGGAAAAG
GCCAACGTCCAAAAGGAGGCCGTGCGCGAGATTGACGACAAGAAGGGAGG
GAAAGAGGAAGGGAATGCGGGAGAACCGTAG
back to top

protein sequence of NO30G00310.1

>NO30G00310.1-protein ID=NO30G00310.1-protein|Name=NO30G00310.1|organism=Nannochloropsis oceanica|type=polypeptide|length=225bp
MKKPSPRGAAGASFVFVCVFLFSSSSVLVDGSALRGSSESLLLDDGDAGA
LKEPPLAYFPHHGDDRENSGRRVRGLSNRALAPISPELVKEENQGYVEAK
TSPIVVKAPEEAAKDPLRLPGGKQGPVEGAKDPLRLPGGKQGPVEGAKDP
LRLPGGKQGPVEGAKDPLRLPGGKQGPVEGAKDPLRLPGGKQAPVMEKAN
VQKEAVREIDDKKGGKEEGNAGEP*
back to top
Synonyms
Publications