Properties
Property Name Value
Description Unknown protein
Alignments
The following features are aligned
Aligned Feature Feature Type Alignment Location
chr30 genome chr30:95495..98297 +
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
Term Definition
GO:0006355 regulation of transcription, DNA-templated
Homology
BLAST of NO30G00220 vs. NCBI_GenBank
Match:
EWM23721.1 (conserved unknown protein [Nannochloropsis gaditana])
HSP 1 Score: 92.8 bits (229), Expect = 2.500e-15
Identity = 56/134 (41.79%), Postives = 74/134 (55.22%), Query Frame = 0
Query: 212 RRATKEDLSGLTAEEKVERRKIRARMYNRLSRYRCNRLHGDLHKDVSRMEMYKNIVEDAPDMICVISPDIQSQVLYINKTARCILHAEPAQLVGSSFWNIVHPEDKMALFGALTAVSAFKSVGKVERLRCRVVT 346
+RA + DLSG T EK ERRK RARMY+ R R N L + V + +YK +V++AP++ V+S D Q++VLY N P VG S W +VH EDK + GA SA +V R RCR+ T
Sbjct: 278 KRARRTDLSGYTPGEKQERRKERARMYSAQVRERQNAELHALRQQVQALSVYKLMVDEAPEIFAVLSADSQAKVLYANAAFARFFLCHPESCVGRSVWEVVHREDKETVMGAF--ASAVMEKEEVGRARCRLGT 409
BLAST of NO30G00220 vs. NCBI_GenBank
Match:
EWM23655.1 (pas pac sensor hybrid histidine kinase [Nannochloropsis gaditana])
HSP 1 Score: 78.6 bits (192), Expect = 4.900e-11
Identity = 53/180 (29.44%), Postives = 93/180 (51.67%), Query Frame = 0
Query: 205 LPSTEKQRRATKEDLSGLTAEEKVERRKIRARMYNRLSRYRCNRLHGDLHKDVSRMEMYKNIVEDAPDMICVISPDIQSQVLYINKTARCILHAEP-----AQLVGSSFWNIVHPEDKMALFGALTAVSAFKSVGKVERLRCRVVTDN----------PGIYVSVRMTLANGMQGIVCVM 370
L + K+RRA + D S LT EE+++ +K RAR Y+ ++R R ++ L +V R+++YK +VE APD + ++S D Q ++L+ NK + + P L G W + D++A+F A+ V K + V + C V + P + V +TL + QG++ ++
Sbjct: 319 LTTLGKKRRAPRMDFSKLTPEEQIQWKKARARKYSAMARERQSKKEEALRAEVGRLQVYKTLVEAAPDAMLLLSNDAQGRILFANKESEKLFGFIPKGGAEKPLPGRCLWEWLDVTDRVAIFAAIGKVVLCKHL--VRAVPCTVWLPSGSVPKHDARGPQQSLKVLITLRSSAQGLILII 496
The following BLAST results are available for this feature:
BLAST of NO30G00220 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (
BLASTP analysis of N. oceanica IMET1 genes )
Total hits: 2
200 400 600 800 1000 1200 1400 1600 1800 2000 2200 2400 2600 2800 Expect = 2.50e-15 / Id = 41.79 Expect = 4.90e-11 / Id = 29.44 Sequence EWM23721.1 EWM23655.1
Match Name E-value Identity Description
EWM23721.1 2.500e-15 41.79 conserved unknown protein [Nannochloropsis gaditan... [more]
EWM23655.1 4.900e-11 29.44 pas pac sensor hybrid histidine kinase [Nannochlor... [more]
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Relationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence
>NO30G00220 ID=NO30G00220|Name=NO30G00220|organism=Nannochloropsis oceanica|type=gene|length=2803bp CAATAATAGAGTGCGTCGTCCGCCACACAATGTCGGCCTTTGATTCCGAC CCCAAAGGATTAGCGGGGCACCCTCCATTTCCTGGAGATATTTGCCGAGC TAGCTGCAAGCCCTCTCGGTGTATAATCCGACGCAGCAGATTGATTTCCT TGCTGCCACATGTTCTTGCTTGCTTTCGCTGCCTAAGCATAGCTGGCAGG CTGGCCACAGACAGACTGGCTGGCTGGCCGCAGACAGACTGGCTGGCTGG CCACAGACAGACAGTAGCACCACGTGTGTCTTCATGTCGTGCCTGCGCTC CGCCTATGCCGTCTTAGAGCCATCTCCCAGCTCCCATCTCCAATCCAACT GCCCATGCATGCAGTGTCACAAATCTCAATCTATCTGAGCTTCTGCTTGC CCAATGACATTCTCTAATACGTGTTCTCATTCTCCAATCGGGGTTTTTGG CCCCACTGCTGAGCAGCGGTGGGACCAGAGTCAGCGCGAACTGCCTCCAC GGAATGAAGGATTCGTTGTCTCTTGACTTAGACGAGAATAAGGCACACGG CGGCGCGGCAGCCCTGTGCAGCCTAGCAACACTCTCTGCCGCTACTGACC CGCCTCCCGTCTCCACGCCGTGTTATCCCTCGTCTTGGGCCTCTTCTCTC GTAGCAGCGAACCACGgtacgtttttggaaggcgattggtgcccattatc ccccaacttgcctcctctatgcctctatgtacaccttctcctgattaact acgtacaccatcccccgacttgtacgtggccttgtacatggaagcgtacg tgcacgacacactccgcataatgtttctttttcatcttttcatttttcat tttcccgtcgccattatgtgtttggccaccagcatgctgacaaatgcttc tacgacattgtaagcaaaaagaatatatacacaggtatatcccgccccga gtcacacacaagcgtctacatgcgcaccagctacatgcagcgcatctatt cgtagatgcgcacgctcacttcaacatacatacataccccccccccacac acacagTCTTAGAACTTCAGAAGCAGGTGGTGGACAAATCATTGCAATCC TTTCTGACCCAGTACCAGCAACAGTTTCACCCGTCGGCCATTCATCAGCA TGCTATCCTGGATGATAAGATGACCAAGGTACTCTCCCAGGCCTCGCCGT CTTTTCTAGCACAGCAGCACCACCAGCTCCAGCAGTATTTCAACCAAAGT CACCTACCACTGCAGCTTCATTACTTCCTAAAATGCCAAATGCAGCCAAT TGAAAAGCAGCATATGATGGCGTCGACCAAGTGCTTTTCTATGAACGAGT TACCGCTCACCACCGAGCACGTGGAAGCCAAGATCTACCCACCGATTGCA CCGCTGAGCGAGACCCCTCTGCTGCTGCAGGAGATTCGAGCTGGTGTGAT GGGTGTTTCGGTGGGACGGCTGCCTGGCAGATACTCCAAGATCATGGGAA AGTACCTTCCGgtaagagaacagagagatatgagcatggtgcttgcgtct tttctcagcctttgttgggaactcactctttgtttgtctccattcactcg ttctttatctacatcagAGCACAGAGAAGCAGCGACGAGCAACGAAAGAG GACTTGTCGGGATTAACGGCAGAGGAGAAGGTGGAGCGACGCAAGATTCG CGCACGCATGTACAATCGCTTGTCTCGCTACCGGTGCAACCGGTTGCATG GTGACCTGCACAAGGACGTGAGTCGCATGGAAATGTACAAGAACATTGTT GAAGATGCGCCGGACATGATATGTGTCATCTCCCCCGACATTCAGAGCCA GGTGCTGTACATCAACAAGACCGCTCGATGCATCCTTCACGCTGAGCCCG CGCAGCTGGTGGGGTCCAGCTTCTGGAATATTGTCCACCCGGAAGATAAG ATGGCGCTGTTCGGGGCACTCACTGCCGTCTCCGCCTTCAAGTCGGTCGG GAAAGTGGAACGGCTACGCTGTCGTGTTGTCACCGACAACCCCGGTATAT ATGTATCTGTCCGGATGACGCTCGCAAACGGGATGCAGGGCATTGTCTGC GTAATGTGCCACGAAGACCCTCTGTCTACCGTTTCGCGCGTGTCGCCTGA TGGACGAGTGTGTCTTATGTAGGACGCTCTATTTTTGGGTACCATGATTA TCTGACGATGGCTTGTGGAGTACATAAATTACTATCGCGGTGGACACGGC AGAGGGTGTCCCTTGACTTCTACGGCGACATGATGTGGCCTGATCCGCTA CTCTCGGGGACAAGGGCATCCGACCGGAACGAGTGGAGAGGCAATGAAAA CGATACATTTCCGCTTTATGCAGTAGAATCAAATTAGCAGAAAGCTTTCA GAGGATTCTTCTTTCCCTTGTAGACCGTCTGCTGCGTCTTTCGCGCGACG TTGACGATTATGTAAACCAGGGAAGGGGAGTCAGGAGGTCCTTTTCACGT GACAAGTGATGAAACATTTTGGAAATACCGTTACTAAAAGCGGCGACATT CCTAAAAGTAGCTATACATTGGATGAGGAAAAAGGTCACAAGTTCAAATA TGATTGATAAAAAAGAAGGGAAAATGTTTGATATGAGATGAATTTTGTTG AATTACGTAGATAGGAAGAAGAAGACGTGGGGAGAGAGAGAGTGAGTCTG AGAGATAGATAGAGAGATAGCGATAGAACGATAGAGAGAAAAAGAGAGAG GAAAAAAAGAGGGCTCGACTTGCCAGGGAAATAATTTCATACATGCTGGT GCT back to top protein sequence of NO30G00220.1
>NO30G00220.1-protein ID=NO30G00220.1-protein|Name=NO30G00220.1|organism=Nannochloropsis oceanica|type=polypeptide|length=391bp MKDSLSLDLDENKAHGGAAALCSLATLSAATDPPPVSTPCYPSSWASSLV AANHVLELQKQVVDKSLQSFLTQYQQQFHPSAIHQHAILDDKMTKVLSQA SPSFLAQQHHQLQQYFNQSHLPLQLHYFLKCQMQPIEKQHMMASTKCFSM NELPLTTEHVEAKIYPPIAPLSETPLLLQEIRAGVMGVSVGRLPGRYSKI MGKYLPSTEKQRRATKEDLSGLTAEEKVERRKIRARMYNRLSRYRCNRLH GDLHKDVSRMEMYKNIVEDAPDMICVISPDIQSQVLYINKTARCILHAEP AQLVGSSFWNIVHPEDKMALFGALTAVSAFKSVGKVERLRCRVVTDNPGI YVSVRMTLANGMQGIVCVMCHEDPLSTVSRVSPDGRVCLM* back to top