NO30G00090, NO30G00090 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO30G00090 vs. NCBI_GenBank
Match: XP_011132150.1 (putative transmembrane protein [Gregarina niphandrodes] >EZG47684.1 putative transmembrane protein [Gregarina niphandrodes]) HSP 1 Score: 75.1 bits (183), Expect = 4.800e-10 Identity = 42/138 (30.43%), Postives = 72/138 (52.17%), Query Frame = 0 Query: 74 FPVYYINMEQSSGRRERMELDFGGIWDLRRSPAVDGMDIDIVLQLMGRMNYDDIHSSISDD----RRQGTINGAELGCVLSHLTAIRRAYLEGNEIAMIVEDDITPLLMPFWTNSLVDVINEAGNYSAGTWDMVQMAW 208 FP++YIN+++ S RR ME FG + V G + + ++ + + + ++D RR+ ELG ++ HL AI++AY ++ +I+EDD+ L P+W SL V ++A Y G W +Q+ W Sbjct: 1383 FPIFYINLQKQSNRRRYMEETFG-----PSAVRVGGTNGTNLFAVLDKYRIGEPEAFVNDPWGYLRREHQTTPGELGALIGHLDAIKKAYQGHHDTVLIMEDDMGVQLCPYWPASLAVVKSQADIYYPG-WHSIQLQW 1514
BLAST of NO30G00090 vs. NCBI_GenBank
Match: XP_011132952.1 (LPS glycosyltransferase [Gregarina niphandrodes] >EZG43864.1 LPS glycosyltransferase [Gregarina niphandrodes]) HSP 1 Score: 72.0 bits (175), Expect = 4.000e-9 Identity = 53/176 (30.11%), Postives = 85/176 (48.30%), Query Frame = 0 Query: 68 INYELPFPVYYINMEQSSGRRERMELDFGGIWDLRRSPAVDGMDIDIVLQLMGRMNYDDIHSSISDDRRQG-----------TINGA---ELGCVLSHLTAIRRAYLEGNEIAMIVEDDITPLLMPFWTNSLVDVINEAGNYSAGTWDMVQMAWIWGMDETLYDRDAHNFGPDRHL 230 I + LPF YY+N+++S RRE ME F +R AVDG D ++M +N+ D+R +G + GA ELGC S L A+++ Y +G+E+A++ EDD+ + FWT+ L ++ + A W ++++ W RD H D +L Sbjct: 32 ILWNLPF--YYVNLDRSVKRREYMERTFPHATRIR---AVDGRDPS---EVMSAINFP------PDERGRGWSPAEFAHYTKRVFGATPGELGCYASRLDALKQMYEDGHELALVGEDDVDLNMCRFWTSDLARIVRQVQQEDA-DWHLLRLQWSDKYAHMQTIRDLHLDAVDDYL 192
BLAST of NO30G00090 vs. NCBI_GenBank
Match: XP_004989890.1 (hypothetical protein PTSG_12837 [Salpingoeca rosetta] >EGD78214.1 hypothetical protein PTSG_12837 [Salpingoeca rosetta]) HSP 1 Score: 70.5 bits (171), Expect = 1.200e-8 Identity = 37/136 (27.21%), Postives = 69/136 (50.74%), Query Frame = 0 Query: 74 FPVYYINMEQSSGRRERMELDFGGIWDLRRSPAVDGMDIDIVLQLMG---RMNYDDIHSSISDDRRQGTINGAELGCVLSHLTAIRRAYLEGNEIAMIVEDDITPLLMPFWTNSLVDVINEAGNYSAGTWDMVQMA 207 F V YI+ + R+ +ME G+W +R PA+DG + VLQ + + + + ++D R+ ++ E +SHL A+ + + +++EDD+T L+PFWT +L + + W +V++A Sbjct: 162 FTVLYISRDVDVVRQGQMEEGVAGLWGAKRIPAIDGTHQENVLQRLAGTPQQAQATLQNLVTDKRKPAKVHLKEAAVSISHLDALHQIAVSDRPYGLVLEDDVTIDLLPFWTQTLQAFVQK----MPADWKLVRLA 293
BLAST of NO30G00090 vs. NCBI_GenBank
Match: OLQ03446.1 (Glucan endo-1,3-beta-glucosidase 14 [Symbiodinium microadriaticum]) HSP 1 Score: 68.6 bits (166), Expect = 4.500e-8 Identity = 66/250 (26.40%), Postives = 111/250 (44.40%), Query Frame = 0 Query: 76 VYYINMEQSSGRRERMELDFGGIWDLR---------RSPAVDGMDIDIVLQLMGRM-----NYDDIHSSISDDRRQGTINGAELGCVLSHLTAIRRAYLEGN-EIAMIVEDDITPLLMPFWTNSLVDVINEAGNYSAGTWDMVQMAWIWGMDETLYDRDAHNFGPDRHLLQTRFQFGTSAYVISKGGMGKILNAYFTDRTETGQIRLRKGGDQAELYIYGAIS--NLYVAMPSFFTIEGSDTTISVGEES 309 +Y+IN++ S RR ME F + + + R PAV D+ +Q G + D + + +G + EL C LSHL A+R A G + +I+EDD+ + P + L +I +A AG W +QM+ + T + G + F GT +Y+I++ GM ++L+ Y T + G QAE ++GA++ +Y + +F + TT+ V S Sbjct: 554 IYWINLDSSKDRRAAMEKMFAKLGETKPSTLTLQVTRVPAVTTQDVK-AMQANGTIVVEAKLIDACSEACPEHHSRGELLYTELACSLSHLRAMRLASSRGRPPLVLIMEDDVE--IYPEFGRDLDKLIEQA---PAG-WSALQMSTV----STKAILQLASAGTIFQPREPHFD-GTGSYMIAESGMAQLLDRYATGHFQRKPWLPGAGSLQAEGILFGALTEGTVYTSTHFYFNLLEFPTTVHVMSNS 791
BLAST of NO30G00090 vs. NCBI_GenBank
Match: ATZ80599.1 (glycosyltransferase [Bodo saltans virus]) HSP 1 Score: 68.6 bits (166), Expect = 4.500e-8 Identity = 53/220 (24.09%), Postives = 99/220 (45.00%), Query Frame = 0 Query: 75 PVYYINMEQSSGRRERMELDFG--GIWDLRRSPAVDGMDIDIVLQLMGRMNYDDIHSSISDDRRQGTINGAELGCVLSHLTAIRRAYLEGNEIAMIVEDDITPLLMPFWTNSLVDVINEAGNYSAGTWDMVQMAWIWGMDETLYDRDAHNFGPDRHLLQTRFQFGTSAYVISKGGMGKILNAYFTDRTETGQIRLRKGGDQAELYIYGAISNLYVAMPSF 293 P+Y+IN+ +S R++ ME F I R AVDG +++ NYD HS+ + +N E+ C LSH+ A+ + Y +G+E +I+EDD + F +++++ N + D++Q+ + + + N + +++ T AY I + + KIL+ L +A+ Y+Y ++ Y +P F Sbjct: 8 PIYWINLNRSIDRKDFMESQFEKYKIPYTCRIEAVDGNNLN-------STNYDLFHST-----KIKKLNIYEIACTLSHIKALTKCYKDGHEYCIIMEDDCDFRYLEFHEKTIIELF----NLNNDDIDVIQLITTMNACDLINIKKQLN----NQSIIKGYKWNTGAYFIKRNAIKKILD-------------LNCELTEADHYVYNYVNTFYTTIPYF 194
BLAST of NO30G00090 vs. NCBI_GenBank
Match: WP_047764111.1 (hypothetical protein [Kiloniella spongiae] >KLN60900.1 hypothetical protein WH96_10620 [Kiloniella spongiae]) HSP 1 Score: 65.5 bits (158), Expect = 3.800e-7 Identity = 51/184 (27.72%), Postives = 85/184 (46.20%), Query Frame = 0 Query: 75 PVYYINMEQSSGRRERMELDFGGI-WDLRRSPAVDGMDIDIVLQLMGRMNYDDIHSSISDDRRQGTINGAELGCVLSHLTAIRRAYLEGNEIAMIVEDDITPLLMPFWTNSLVDVINEAGNYSAGTWDMVQMAWIWGMDETLYDRDAHNFGPDRHLLQ----TRFQFGTSAYVISKGGMGKILN 254 P++ IN+E+S+ RR++++ F I + A+DG ++D NY + + + + T N E+GC LSH T R EG+E+A+I+EDD+ T+ L D++N WDM+++A T DR P + G YV+++ G K+ N Sbjct: 6 PIFIINLERSAERRKKIKEQFNSIELNYEFYKAIDGRELD----SKNIPNYAHAY-RLKEFGKDMTPN--EIGCYLSHFTLFERILNEGHEMALIIEDDVN------ITSELPDILNNLKTVKT-PWDMIRLA-------TSRDRKFEILEPITEITNLVNLKGNACGAVGYVLNRSGAEKLCN 168 The following BLAST results are available for this feature:
BLAST of NO30G00090 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 6
Relationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO30G00090 ID=NO30G00090|Name=NO30G00090|organism=Nannochloropsis oceanica|type=gene|length=1809bpback to top protein sequence of NO30G00090.1 >NO30G00090.1-protein ID=NO30G00090.1-protein|Name=NO30G00090.1|organism=Nannochloropsis oceanica|type=polypeptide|length=346bpback to top Synonyms
Publications
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