NO30G00080, NO30G00080 (gene) Nannochloropsis oceanica

Overview
NameNO30G00080
Unique NameNO30G00080
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1934
Alignment locationchr30:33953..35886 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr30genomechr30:33953..35886 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO30G00080 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR074ncniR074Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO30G00080.1NO30G00080.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO30G00080.1NO30G00080.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO30G00080 ID=NO30G00080|Name=NO30G00080|organism=Nannochloropsis oceanica|type=gene|length=1934bp
ATGCTCCATTTGTCGACACTGTGGAAGTGGACGGTGCCGATGTCGAAGCA
GGCGCAGGTGCTGGTGTCGGAGGCGGCGTGGGAATCGGAGCGGGCGCAGA
CGGAGATGAGGTGCACGACCCGTATAAGCTATTACATCCAAAGCCACAAT
AAGCTGGTGTCGTACCACACCAACCGTACTGGCTACAGCACAAGCCTGCT
GGACACACACCGGCAGAGGCGCCACATGCTCCATTTGTCGACACTGTGGA
AGTGGACGGTGCCGATGTCGAAGCAGGCGCAGGTGCTGGTGTCGGAGGCG
GCGTGGGAATCGGAGCGGGCGCAGACGGAGATGAGGTGCACGACCCGTAT
AAGCTATTACATCCAAAGCCACAATAAGCTGGTGTCGTACCACACCAACC
GTACTGGCTACAGCACAAGCCTGCTGGACACACACCGGCAGAGGCGCCAC
ATGCTCCATTTGTCGACACTGTGGAAGTGGACGGTGCCGATGTCGAAGCA
GGCGCAGGTGCTGGTGTCGGAGGCGGCGTGGGAATCGGAGCGGGCGCAGA
CGGAGATGAGGTGCACGACCCGTATAAGCTATTACATCCAAAGCCACAAT
AAGCTGGTGTCGTACCACACCAACCGTACTGGCTACAGCACAAGCCTGCT
GGACACACACCGGCAGAGGCGCCACATGCTCCATTTGTCGACACTGTGGA
AGTGGACGGTGCCGATGTCGAAGCAGGCGCAGGTGCTGGTGTCGGAGGCG
GCGTGGGAATCGGAGCGGGCGCAGACGGAGATGAGGTGCACGACCCGTAT
AAGCTATTACATCCAAAGCCACAATAAGCTGGTGTCGTACCACACCAACC
GTACTGGCTACAGCACAAGCCTGCTGGACACACACCGGCAGAGGCGCCAC
ATGCTCCATTTGTCGACACTGTGGAAGTGGACGGTGCCGATGTCGAAGCA
GGCGCAGGTGCTGGTGTCGGAGGCGGCGTGGGAATCGGAGCGGGCGCAGA
CGGAGATGAGGTGCACGACCCGTATAAGCTATTACATCCAAAGCCACAAT
AAGCTGGTGTCGTACCACACCAACCGTACTGGCTACAGCACAAGCCTGCT
GGACACACACCGGCAGAGGCGCCACATGCTCCATTTGTCGACACTGTGGA
AGTGGACGGTGCCGATGTCGAAGCAGGCGCAGGTGCTGGTGTCGGAGGCG
GCGTGGGAATCGGAGCGGGCGCAGACGGAGATGAGGTGCACGACCCGTAT
AAGCTATTACATCCAAAGCCACAATAAGCTGGTGTCGTACCACACCAACC
GTACTGGCTACAGCACAAGCCTGCTGGACACACACCGGCAGAGGCGCCAC
ATGCTCCATTTGTCGACACTGTGGAAGTGGACGGTGCCGATGTCGAAGCA
GGCGCAGGTGCTGGTGTCGGAGGCGGCGTGGGAATCGGAGCGGGCGCAGA
CGGAGATGAGGTGCACGACCCGTATAAGCTATTACATCCAAAGCCACAAT
AAGCTGGTGTCGTACCACACCAACCGTACTGGCTACAGCACAAGCCTGCT
GGACACACACCGGCAGAGGCGCCACATGCTCCATTTGTCGACACTGTGGA
AGTGGACGGTGCCGATGTCGAAGCAGGCGCAGGTGGTGTTGGAAATGGAG
TTGGCAATGTTGATGAAGAACTGATGCAGGAACCAGACTGACAACCAGTG
CCACAATAAGCTGGTGTCGTACCACACCAACCGTACTGGCTACAGCATTT
ATCTGCTACACAGATACCCAACGTCCCTCCACACTGCTGAGCATCAAGTA
GCTGTATCATCATGTAAGCAAAGGCGAGCCTTTGATAGAAGTGAAGCATT
CCGCTGGTCAAATGAGGAATAATTTAGAGGGAAAACGGTACGTATGGTCA
ACTTTGTGCCCTGCCGTCGTAACCAATATCTGCT
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protein sequence of NO30G00080.1

>NO30G00080.1-protein ID=NO30G00080.1-protein|Name=NO30G00080.1|organism=Nannochloropsis oceanica|type=polypeptide|length=558bp
MLHLSTLWKWTVPMSKQAQVLVSEAAWESERAQTEMRCTTRISYYIQSHN
KLVSYHTNRTGYSTSLLDTHRQRRHMLHLSTLWKWTVPMSKQAQVLVSEA
AWESERAQTEMRCTTRISYYIQSHNKLVSYHTNRTGYSTSLLDTHRQRRH
MLHLSTLWKWTVPMSKQAQVLVSEAAWESERAQTEMRCTTRISYYIQSHN
KLVSYHTNRTGYSTSLLDTHRQRRHMLHLSTLWKWTVPMSKQAQVLVSEA
AWESERAQTEMRCTTRISYYIQSHNKLVSYHTNRTGYSTSLLDTHRQRRH
MLHLSTLWKWTVPMSKQAQVLVSEAAWESERAQTEMRCTTRISYYIQSHN
KLVSYHTNRTGYSTSLLDTHRQRRHMLHLSTLWKWTVPMSKQAQVLVSEA
AWESERAQTEMRCTTRISYYIQSHNKLVSYHTNRTGYSTSLLDTHRQRRH
MLHLSTLWKWTVPMSKQAQVLVSEAAWESERAQTEMRCTTRISYYIQSHN
KLVSYHTNRTGYSTSLLDTHRQRRHMLHLSTLWKWTVPMSKQAQVVLEME
LAMLMKN*
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Synonyms
Publications