NO30G00010, NO30G00010 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO30G00010 vs. NCBI_GenBank
Match: XP_005854957.1 (zinc metalloendopeptidase, partial [Nannochloropsis gaditana CCMP526] >EKU21397.1 zinc metalloendopeptidase, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 303.1 bits (775), Expect = 3.000e-78 Identity = 161/312 (51.60%), Postives = 206/312 (66.03%), Query Frame = 0 Query: 640 FNITLINVNQSETGLDAFMSSAQARWQNIITAEAADIDL-GQTDLTSGRFAPY--TYSGPVDDIIIFYELATLPPGVLGSAGPTLVRTNNSQPIAGTMRFSIDFFNSGDITEDVILHEMAHAMGFGTVWDLIGCLSTVCDEDTPSPVTYTCANGLAQYALTNCTTIH-PNLTIETSTGSPGSDCGHWAEASYKTELMSPAVNIASLESNSLSRFTIGAMADIWGSVNYAEADPFSCSVGIASASQAQSDDAPISEMLYPLNSGEVILSLALAGRTIYDYQLTRLSEEDKQAVVEALASLGKTIVTTGPDRRR 948 FNITLIN ++T +D+ M SA+ARW II A + + G DLT GRF P Y VDDIIIFY LATL PGVLGSAGPT VRT + QP A TM FS FF++ ++TED ILHEMAHA+GFG VWD +GC ST C + + V+Y C G+AQY TNC + P+L IETS+GS GSDCGHW EA Y ELM+P I ++ LSRFTIGAM+DIWG VN EA+ F+C G+ +AS S S +L P+N + ++ A G T+Y++QL L+ ++Q VV+ALA++GKT+ P R+ Sbjct: 29 FNITLINAQPNDTRMDSMMISAKARWTGIILATPSSVPFSGTDDLTGGRFLPEFGPYYSAVDDIIIFYRLATLSPGVLGSAGPTFVRTPSFQPYAATMEFSTTFFDASEVTEDTILHEMAHALGFGLVWDELGCYSTTCTVGSNANVSYICDQGVAQYNQTNCPDVGLPDLLIETSSGSAGSDCGHWTEADYDNELMTPISEIPEVD-QPLSRFTIGAMSDIWGPVNVLEANNFTCP-GVGAAS-VMSGPQHTSILLRPVNIKDALIQGAAMGETVYEHQLVNLTPAERQEVVDALAAMGKTVDQASPHERQ 337
BLAST of NO30G00010 vs. NCBI_GenBank
Match: EWM20104.1 (zinc metalloendopeptidase [Nannochloropsis gaditana]) HSP 1 Score: 291.2 bits (744), Expect = 1.200e-74 Identity = 155/298 (52.01%), Postives = 196/298 (65.77%), Query Frame = 0 Query: 654 LDAFMSSAQARWQNIITAEAADIDL-GQTDLTSGRFAPY--TYSGPVDDIIIFYELATLPPGVLGSAGPTLVRTNNSQPIAGTMRFSIDFFNSGDITEDVILHEMAHAMGFGTVWDLIGCLSTVCDEDTPSPVTYTCANGLAQYALTNCTTIH-PNLTIETSTGSPGSDCGHWAEASYKTELMSPAVNIASLESNSLSRFTIGAMADIWGSVNYAEADPFSCSVGIASASQAQSDDAPISEMLYPLNSGEVILSLALAGRTIYDYQLTRLSEEDKQAVVEALASLGKTIVTTGPDRRR 948 +D+ M SA+ARW II A + + G DLT GRF P Y VDDIIIFY LATL PGVLGSAGPT VRT + QP A TM FS F++GD+TED ILHEMAHA+GFG VWD +GC ST C + + V+Y C G+AQY TNC + P+L IETSTGS GSDCGHW EA Y ELM+P I ++ LSRFTIGAM+DIWG VN EA+ F+C G+ +AS S S +L P+N + ++ A G T+Y++QL L+ ++Q VV+ALA++GKT+ P R+ Sbjct: 1 MDSMMISAKARWTGIILATPSSVAFSGTNDLTDGRFLPEFGPYYSAVDDIIIFYRLATLSPGVLGSAGPTFVRTPSFQPYAATMEFSTTLFDAGDVTEDTILHEMAHALGFGLVWDELGCYSTTCTVGSNANVSYICDQGVAQYNQTNCPDVGLPDLLIETSTGSAGSDCGHWTEADYDNELMTPISEIPEVD-QPLSRFTIGAMSDIWGPVNVLEANNFTCP-GVGAAS-VMSGPQHTSILLRPVNIKDALIQGAAMGETVYEHQLVNLTPSERQEVVDALAAMGKTVDQASPHERQ 295
BLAST of NO30G00010 vs. NCBI_GenBank
Match: XP_013902575.1 (hypothetical protein MNEG_4401 [Monoraphidium neglectum] >KIZ03556.1 hypothetical protein MNEG_4401 [Monoraphidium neglectum]) HSP 1 Score: 132.1 bits (331), Expect = 9.000e-27 Identity = 96/270 (35.56%), Postives = 136/270 (50.37%), Query Frame = 0 Query: 641 NITLINVNQSETGLDAFMSSAQARWQNIITAEAAD-IDLGQTDLTSGRFAPYT-YSGPVDDIIIF------------------YELATLPPGVLGSAGPTLVRTNNSQ----PIAGTMRF---SIDFFNSGDITEDVILHEMAHAMGFGTVWDLIGCLSTVCDEDTPSPVTYTCANGLAQYALTNCTTIHPNLTIETSTGSPGSDCGHWAEASYKTELMSPAVNIASLESNSLSRFTIGAMADIW--GSVNYAEADPFSCSVGIASASQA 882 NI L+ + +++ DA +A+A+W++I+ + D ++ DL+ + Y+ VDDI+I Y ++TL LG AGPT R + S+ P+A M F I D + V+LHEM HA+G GTV D IGC+ C + S + C N A+Y C T P IET G GS CGHW+E KTELM+P ++ N LS TIGA+ DI+ GSV+Y +AD FSC I ++ A Sbjct: 67 NIQLVRIG-TDSSQDATFQAAKAKWESILKVDVPDFVNTANIDLSDNWVSGYSNKQRNVDDIVIIYLPVAALAAARGRNASARYGMSTLSGDTLGWAGPTYFRNDGSKYSNTPVAAVMMFDKNKITSLGGQDNFKIVVLHEMGHALGLGTVDDRIGCIKN-CVAGSKSNNFWQCKNANAKYLSIGCKTQVP---IETEMGD-GSGCGHWSETKLKTELMTPVLDDG--VPNPLSVVTIGALEDIYGDGSVDYGQADAFSCQTNIVASVAA 328
BLAST of NO30G00010 vs. NCBI_GenBank
Match: EWM26413.1 (hypothetical protein Naga_101468g1, partial [Nannochloropsis gaditana]) HSP 1 Score: 122.9 bits (307), Expect = 5.500e-24 Identity = 66/196 (33.67%), Postives = 97/196 (49.49%), Query Frame = 0 Query: 116 AVYWLNVDLPRQKRLRFTVSFRLATKTCFARTINFPAYVYLIDSVSGSATCPSPATSIDVHVKGISSKRRPCPTTPSPTAASNVTQSFLLIGVSEQCLEAGSQTPFENRRDLTMAEAKPFMTHADEEGRSFVQHQDLRGLQTAVINTLEDCWQYCSTFGGTPAPFYFNWNRDTSTCFCCGGTCTLVRNPAFLAFEV 312 AV+WL D + K + + C T+ YL+++ + C +P S V S ++ P+P N Q F+L G ++CLEA PF++RR L+ + + + + H++ R LQ+ I T DC+ YCS GG PF+FNWN TS CFCCG CTL+ +PAF A+EV Sbjct: 136 AVFWLGFDFAKAKGNKRVFKAKAKVDACAPETLTVTGLAYLVNATDLTTYCATPLASPAVLNVRYSKAKKVATCAPTPAPTVNPAQPFVLFGDGQRCLEASRLAPFDDRRLLSSSNGREY---------AHSIHREHRHLQS--IATPSDCFTYCSLNGGESVPFFFNWNTVTSQCFCCGNVCTLIVDPAFSAYEV 320
BLAST of NO30G00010 vs. NCBI_GenBank
Match: WP_018467545.1 (PKD domain-containing protein [Meiothermus timidus]) HSP 1 Score: 120.6 bits (301), Expect = 2.700e-23 Identity = 85/252 (33.73%), Postives = 124/252 (49.21%), Query Frame = 0 Query: 640 FNITLINVNQSETGLDAFMSSAQARWQNIITAEAADIDLG-QTDLTSGRFAPYTYSGPVDDIIIFYELATL--PPGVLGSAGPTLVRTNNSQPIAGTMRF---SIDFFNSGDITEDVILHEMAHAMGFGTVWDLIGCLSTVCDEDTPSPVTYTCANGLAQYALTNCTTIHPNLTIETSTGSPGSDC------GHWAEASYKTELMSPAVNIASLESNSLSRFTIGAMADIWGSVNYAEADPFSCSVGIASAS 880 +NITL TG A +A A+W +IT A I+L D + F ++G VDDI+I + T+ P G+LG AGP R +N + G MRF +D S ++VI HEM H +G GT+W+ L T DTP + A +A++ + P +P S C GHW EA + E+M+ +N +N LS+ TIG++ D+ SVNY+ ADP++ AS+S Sbjct: 123 YNITLRFTGTLTTGQQAAFDAAAAKWGQVITQGFASINLNISADECASGFP--AFNGSVDDILIDAAVVTIDGPGGILGQAGPCFTRISNDLTVYGIMRFDSADLDALESSGQLDEVIFHEMGHVLGIGTLWNYNRSLLTGAGTDTP---LFVGAKAVAEWQALGGSGNVPVENCRDKNNNPISGCGSGTRDGHWREAVFDNEVMTGYLNSG---ANPLSKVTIGSLEDLGYSVNYSAADPYTLPSLQASSS 366
BLAST of NO30G00010 vs. NCBI_GenBank
Match: EWM21515.1 (hypothetical protein Naga_100317g3 [Nannochloropsis gaditana]) HSP 1 Score: 119.0 bits (297), Expect = 7.900e-23 Identity = 79/252 (31.35%), Postives = 125/252 (49.60%), Query Frame = 0 Query: 67 KVTYMLANTGYEKIRGAAIRIGLPSQ-NMTNNIKASKARKAQDLAIE--PGYAVYWLNVDLPRQKRLRFTVSFRLATKTCFARTINFPAYVYLIDSVSGSATCPSPATSIDVHVKGISSKR-RPCPTTPSPTAASNVTQSFLLIGVSEQCLEAGSQTPFENRRDLTMAEAKPFMTHADEEGRSFVQHQDLRGLQTAVINTLEDCWQYCSTFGGTPAPFYFNWNRDTSTCFCCGGTCTLVRNPAFLAFEVISA 315 K+T +L N + + G I+I LPS ++ + A+E A+YW ++D R+ R R ++ C + + A YL ++ + T P + ++++ SKR C TP+P+ N+ + F+ G+ ++C EA PF +RR + + + + V R LQ I+T + C++YCS GG PAPF+FNWN S C CC G CTL+R+PAF AF+VI A Sbjct: 51 KLTVILRNK--DAVEGLNIKISLPSSLSVVRTTTRPRTPYVLPYAVENLEETAIYWSDIDFARRNR-RKLFHVKVQADDCAPKQLEINALAYLANATTTHCTVPLSKPEV-LNIRYAESKRTTTCVPTPAPSI--NLAEPFVPFGLGQRCAEASRLAPFGDRR------LQEHLERGRLQDNTRVISARARHLQG--IDTPQQCYEYCSLNGGAPAPFFFNWNTVASECLCCAGECTLIRDPAFDAFKVIVA 288
BLAST of NO30G00010 vs. NCBI_GenBank
Match: WP_011530793.1 (Ig-like protein, group 2 [Deinococcus geothermalis] >ABF45960.1 metalloendopeptidase M8 containing Ig-like domains [Deinococcus geothermalis DSM 11300]) HSP 1 Score: 117.9 bits (294), Expect = 1.800e-22 Identity = 92/251 (36.65%), Postives = 131/251 (52.19%), Query Frame = 0 Query: 640 FNITLI---NVNQSETGLDAFMSSAQARWQNIITAEAADIDLGQTDLTSGRFAPYTYSGPVDDIIIFYELATL--PPGVLGSAGPTLVRTNNSQPIAGTMRF-SIDFFN--SGDITEDVILHEMAHAMGFGTVWD-LIGCLSTVCDEDTPSPVTYTCANGLAQYALTNCTTIHPNLTIETSTGSPGSDCGHWAEASYKTELMSPAVNIASLESNSLSRFTIGAMADIWGSVNYAEADPFSC-SVGIASASQ 881 FNIT+I N N +ET AF S+A RW +I A D+ L++G + VDD+ I + P VLG AGP VR + P+ G M+F S D N + + V+LHEM H +G GT+WD + ++ C+ T V Y A+GL +Y N + + +E G G+ C HW E+ +++ELM+ AS LSR T+GA+AD+ SVNYA ADP++ +VG S Q Sbjct: 214 FNITVIFPANNNLTETQKAAFTSAAN-RWSQVIAAGLPDVP--NVRLSTGE------TVTVDDVTIVASGVAIDGPGNVLGQAGPRQVRNGTTLPLWGEMQFDSADLANMEANGTLQGVVLHEMGHVLGIGTLWDRSLSANASPCENAT--QVQYLGASGLREY--RNLGGLAAGVPVENQYGE-GTKCAHWKESVFQSELMT---GFASRGPMPLSRLTLGALADLGYSVNYAAADPYTIPNVGAQSLGQ 447
BLAST of NO30G00010 vs. NCBI_GenBank
Match: WP_062157665.1 (hypothetical protein [Deinococcus actinosclerus] >ALW88332.1 hypothetical protein AUC44_05005 [Deinococcus actinosclerus]) HSP 1 Score: 115.9 bits (289), Expect = 6.700e-22 Identity = 78/240 (32.50%), Postives = 125/240 (52.08%), Query Frame = 0 Query: 640 FNITLINVNQSETGLDAFMSSAQARWQNIITAEAADIDLGQTDLTSGRFAPYTYSGPVDDIIIFYELATL--PPGVLGSAGPTLVRTNNSQPIAGTMRF-SIDFFNSGDITEDVILHEMAHAMGFGTVWDLIGCLSTVCDEDTPSPVTYTCANGLAQYALTNCTTIHPNLTIETSTGSPGSDCGHWAEASYKTELMSPAVNIASLESNSLSRFTIGAMADIWGSVNYAEADPFSCSVGIA 877 +NITL S+ + M +A +RWQ +IT D+ + + G A YSG +DDI++F ++ P G+L +GP VRT+ T+ F + D N D+ +HE+ H++G G++W G +S V +T +P+ Y NG+ +Y T + +E GS G+ HW E ++KTELM+ +N S N LSR ++G++ D+ +VNYA AD ++ A Sbjct: 61 YNITLNFAAGSDASVVNAMQAAASRWQGVITQGQPDLTVSIPAGSCGSNA--AYSGTIDDILVFTGNKSIDGPGGILAQSGPCSVRTSTGLTTYSTLVFDTADLANFSSQLSDIAVHELGHSLGIGSLWSRFGLVSGV---NTTNPI-YKGTNGVREYRAAGGTL--TTVPVENQGGS-GTAGAHWRETTFKTELMTGYLN--SGVKNPLSRISVGSLQDMGYTVNYAAADAYTVPTATA 289
BLAST of NO30G00010 vs. NCBI_GenBank
Match: ADG66306.1 (Parallel beta-helix repeat protein [Planctopirus limnophila DSM 3776]) HSP 1 Score: 114.0 bits (284), Expect = 2.500e-21 Identity = 87/255 (34.12%), Postives = 124/255 (48.63%), Query Frame = 0 Query: 640 FNITLINVNQSETGLDAFMSSAQARWQNIITAEAADIDLGQTDLTSGRFAPYTYSGPVDDIIIFYELATLP--PGVLGSAGPTLVRTNNSQPIAGTMRF-SIDFFN---SGDITEDVILHEMAHAMGFGTVWDLIGCLSTVCDEDTPSPVTYTCANGLAQYALTNCTTIHPNLTIETSTGSPGSDCGHWAEASYKTELMSPAVNIASLESNSLSRFTIGAMADIWGSVNYAEADPFSCSVGIASASQAQSDDAPI 889 FNI ++ + A S A ARW +IT + AD+DLG D+ +DD+ I E A + G+LG AGP +R ++ P +G MRF S D N SG + DVILHEM H +G GTVW+L G L T P +T A A+Y + + +E +TG PG+ HW E+ Y ELM+ +N N +SR T ++AD VN +DP+ ++ S + S A + Sbjct: 1465 FNIEVVLLGGLTPSQQAIFSQAAARWSQLITGDLADVDLGGGDI-------------IDDLRISAEGANIDGVGGILGQAGPNGIRAGSNLPYSGGMRFDSADLANLEASGQLF-DVILHEMGHVLGIGTVWNLQGLLQ---GGGTADP-RFTGAQATAEYN-ARFANVETGVPVE-NTGGPGTRDSHWRESIYDNELMTGFLNPG--VDNPISRTTTASLADQGYVVNINASDPYLQAITSGSTPSSPSSTAEV 1697
BLAST of NO30G00010 vs. NCBI_GenBank
Match: WP_081440179.1 (hypothetical protein [Planctopirus limnophila]) HSP 1 Score: 114.0 bits (284), Expect = 2.500e-21 Identity = 87/255 (34.12%), Postives = 124/255 (48.63%), Query Frame = 0 Query: 640 FNITLINVNQSETGLDAFMSSAQARWQNIITAEAADIDLGQTDLTSGRFAPYTYSGPVDDIIIFYELATLP--PGVLGSAGPTLVRTNNSQPIAGTMRF-SIDFFN---SGDITEDVILHEMAHAMGFGTVWDLIGCLSTVCDEDTPSPVTYTCANGLAQYALTNCTTIHPNLTIETSTGSPGSDCGHWAEASYKTELMSPAVNIASLESNSLSRFTIGAMADIWGSVNYAEADPFSCSVGIASASQAQSDDAPI 889 FNI ++ + A S A ARW +IT + AD+DLG D+ +DD+ I E A + G+LG AGP +R ++ P +G MRF S D N SG + DVILHEM H +G GTVW+L G L T P +T A A+Y + + +E +TG PG+ HW E+ Y ELM+ +N N +SR T ++AD VN +DP+ ++ S + S A + Sbjct: 1502 FNIEVVLLGGLTPSQQAIFSQAAARWSQLITGDLADVDLGGGDI-------------IDDLRISAEGANIDGVGGILGQAGPNGIRAGSNLPYSGGMRFDSADLANLEASGQLF-DVILHEMGHVLGIGTVWNLQGLLQ---GGGTADP-RFTGAQATAEYN-ARFANVETGVPVE-NTGGPGTRDSHWRESIYDNELMTGFLNPG--VDNPISRTTTASLADQGYVVNINASDPYLQAITSGSTPSSPSSTAEV 1734 The following BLAST results are available for this feature:
BLAST of NO30G00010 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO30G00010 ID=NO30G00010|Name=NO30G00010|organism=Nannochloropsis oceanica|type=gene|length=4381bpback to top protein sequence of NO30G00010.1 >NO30G00010.1-protein ID=NO30G00010.1-protein|Name=NO30G00010.1|organism=Nannochloropsis oceanica|type=polypeptide|length=949bpback to top Synonyms
Publications
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