NO30G00010, NO30G00010 (gene) Nannochloropsis oceanica

Overview
NameNO30G00010
Unique NameNO30G00010
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4381
Alignment locationchr30:578..4958 -

Link to JBrowse

Properties
Property NameValue
DescriptionZinc metalloendopeptidase
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr30genomechr30:578..4958 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004222metalloendopeptidase activity
GO:0004222metalloendopeptidase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0007155cell adhesion
GO:0006508proteolysis
GO:0007155cell adhesion
GO:0006508proteolysis
Vocabulary: INTERPRO
TermDefinition
IPR001577Peptidase_M8
Homology
BLAST of NO30G00010 vs. NCBI_GenBank
Match: XP_005854957.1 (zinc metalloendopeptidase, partial [Nannochloropsis gaditana CCMP526] >EKU21397.1 zinc metalloendopeptidase, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 303.1 bits (775), Expect = 3.000e-78
Identity = 161/312 (51.60%), Postives = 206/312 (66.03%), Query Frame = 0
Query:  640 FNITLINVNQSETGLDAFMSSAQARWQNIITAEAADIDL-GQTDLTSGRFAPY--TYSGPVDDIIIFYELATLPPGVLGSAGPTLVRTNNSQPIAGTMRFSIDFFNSGDITEDVILHEMAHAMGFGTVWDLIGCLSTVCDEDTPSPVTYTCANGLAQYALTNCTTIH-PNLTIETSTGSPGSDCGHWAEASYKTELMSPAVNIASLESNSLSRFTIGAMADIWGSVNYAEADPFSCSVGIASASQAQSDDAPISEMLYPLNSGEVILSLALAGRTIYDYQLTRLSEEDKQAVVEALASLGKTIVTTGPDRRR 948
            FNITLIN   ++T +D+ M SA+ARW  II A  + +   G  DLT GRF P    Y   VDDIIIFY LATL PGVLGSAGPT VRT + QP A TM FS  FF++ ++TED ILHEMAHA+GFG VWD +GC ST C   + + V+Y C  G+AQY  TNC  +  P+L IETS+GS GSDCGHW EA Y  ELM+P   I  ++   LSRFTIGAM+DIWG VN  EA+ F+C  G+ +AS   S     S +L P+N  + ++  A  G T+Y++QL  L+  ++Q VV+ALA++GKT+    P  R+
Sbjct:   29 FNITLINAQPNDTRMDSMMISAKARWTGIILATPSSVPFSGTDDLTGGRFLPEFGPYYSAVDDIIIFYRLATLSPGVLGSAGPTFVRTPSFQPYAATMEFSTTFFDASEVTEDTILHEMAHALGFGLVWDELGCYSTTCTVGSNANVSYICDQGVAQYNQTNCPDVGLPDLLIETSSGSAGSDCGHWTEADYDNELMTPISEIPEVD-QPLSRFTIGAMSDIWGPVNVLEANNFTCP-GVGAAS-VMSGPQHTSILLRPVNIKDALIQGAAMGETVYEHQLVNLTPAERQEVVDALAAMGKTVDQASPHERQ 337          
BLAST of NO30G00010 vs. NCBI_GenBank
Match: EWM20104.1 (zinc metalloendopeptidase [Nannochloropsis gaditana])

HSP 1 Score: 291.2 bits (744), Expect = 1.200e-74
Identity = 155/298 (52.01%), Postives = 196/298 (65.77%), Query Frame = 0
Query:  654 LDAFMSSAQARWQNIITAEAADIDL-GQTDLTSGRFAPY--TYSGPVDDIIIFYELATLPPGVLGSAGPTLVRTNNSQPIAGTMRFSIDFFNSGDITEDVILHEMAHAMGFGTVWDLIGCLSTVCDEDTPSPVTYTCANGLAQYALTNCTTIH-PNLTIETSTGSPGSDCGHWAEASYKTELMSPAVNIASLESNSLSRFTIGAMADIWGSVNYAEADPFSCSVGIASASQAQSDDAPISEMLYPLNSGEVILSLALAGRTIYDYQLTRLSEEDKQAVVEALASLGKTIVTTGPDRRR 948
            +D+ M SA+ARW  II A  + +   G  DLT GRF P    Y   VDDIIIFY LATL PGVLGSAGPT VRT + QP A TM FS   F++GD+TED ILHEMAHA+GFG VWD +GC ST C   + + V+Y C  G+AQY  TNC  +  P+L IETSTGS GSDCGHW EA Y  ELM+P   I  ++   LSRFTIGAM+DIWG VN  EA+ F+C  G+ +AS   S     S +L P+N  + ++  A  G T+Y++QL  L+  ++Q VV+ALA++GKT+    P  R+
Sbjct:    1 MDSMMISAKARWTGIILATPSSVAFSGTNDLTDGRFLPEFGPYYSAVDDIIIFYRLATLSPGVLGSAGPTFVRTPSFQPYAATMEFSTTLFDAGDVTEDTILHEMAHALGFGLVWDELGCYSTTCTVGSNANVSYICDQGVAQYNQTNCPDVGLPDLLIETSTGSAGSDCGHWTEADYDNELMTPISEIPEVD-QPLSRFTIGAMSDIWGPVNVLEANNFTCP-GVGAAS-VMSGPQHTSILLRPVNIKDALIQGAAMGETVYEHQLVNLTPSERQEVVDALAAMGKTVDQASPHERQ 295          
BLAST of NO30G00010 vs. NCBI_GenBank
Match: XP_013902575.1 (hypothetical protein MNEG_4401 [Monoraphidium neglectum] >KIZ03556.1 hypothetical protein MNEG_4401 [Monoraphidium neglectum])

HSP 1 Score: 132.1 bits (331), Expect = 9.000e-27
Identity = 96/270 (35.56%), Postives = 136/270 (50.37%), Query Frame = 0
Query:  641 NITLINVNQSETGLDAFMSSAQARWQNIITAEAAD-IDLGQTDLTSGRFAPYT-YSGPVDDIIIF------------------YELATLPPGVLGSAGPTLVRTNNSQ----PIAGTMRF---SIDFFNSGDITEDVILHEMAHAMGFGTVWDLIGCLSTVCDEDTPSPVTYTCANGLAQYALTNCTTIHPNLTIETSTGSPGSDCGHWAEASYKTELMSPAVNIASLESNSLSRFTIGAMADIW--GSVNYAEADPFSCSVGIASASQA 882
            NI L+ +  +++  DA   +A+A+W++I+  +  D ++    DL+    + Y+     VDDI+I                   Y ++TL    LG AGPT  R + S+    P+A  M F    I      D  + V+LHEM HA+G GTV D IGC+   C   + S   + C N  A+Y    C T  P   IET  G  GS CGHW+E   KTELM+P ++      N LS  TIGA+ DI+  GSV+Y +AD FSC   I ++  A
Sbjct:   67 NIQLVRIG-TDSSQDATFQAAKAKWESILKVDVPDFVNTANIDLSDNWVSGYSNKQRNVDDIVIIYLPVAALAAARGRNASARYGMSTLSGDTLGWAGPTYFRNDGSKYSNTPVAAVMMFDKNKITSLGGQDNFKIVVLHEMGHALGLGTVDDRIGCIKN-CVAGSKSNNFWQCKNANAKYLSIGCKTQVP---IETEMGD-GSGCGHWSETKLKTELMTPVLDDG--VPNPLSVVTIGALEDIYGDGSVDYGQADAFSCQTNIVASVAA 328          
BLAST of NO30G00010 vs. NCBI_GenBank
Match: EWM26413.1 (hypothetical protein Naga_101468g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 122.9 bits (307), Expect = 5.500e-24
Identity = 66/196 (33.67%), Postives = 97/196 (49.49%), Query Frame = 0
Query:  116 AVYWLNVDLPRQKRLRFTVSFRLATKTCFARTINFPAYVYLIDSVSGSATCPSPATSIDVHVKGISSKRRPCPTTPSPTAASNVTQSFLLIGVSEQCLEAGSQTPFENRRDLTMAEAKPFMTHADEEGRSFVQHQDLRGLQTAVINTLEDCWQYCSTFGGTPAPFYFNWNRDTSTCFCCGGTCTLVRNPAFLAFEV 312
            AV+WL  D  + K  +     +     C   T+      YL+++   +  C +P  S  V     S  ++     P+P    N  Q F+L G  ++CLEA    PF++RR L+ +  + +         +   H++ R LQ+  I T  DC+ YCS  GG   PF+FNWN  TS CFCCG  CTL+ +PAF A+EV
Sbjct:  136 AVFWLGFDFAKAKGNKRVFKAKAKVDACAPETLTVTGLAYLVNATDLTTYCATPLASPAVLNVRYSKAKKVATCAPTPAPTVNPAQPFVLFGDGQRCLEASRLAPFDDRRLLSSSNGREY---------AHSIHREHRHLQS--IATPSDCFTYCSLNGGESVPFFFNWNTVTSQCFCCGNVCTLIVDPAFSAYEV 320          
BLAST of NO30G00010 vs. NCBI_GenBank
Match: WP_018467545.1 (PKD domain-containing protein [Meiothermus timidus])

HSP 1 Score: 120.6 bits (301), Expect = 2.700e-23
Identity = 85/252 (33.73%), Postives = 124/252 (49.21%), Query Frame = 0
Query:  640 FNITLINVNQSETGLDAFMSSAQARWQNIITAEAADIDLG-QTDLTSGRFAPYTYSGPVDDIIIFYELATL--PPGVLGSAGPTLVRTNNSQPIAGTMRF---SIDFFNSGDITEDVILHEMAHAMGFGTVWDLIGCLSTVCDEDTPSPVTYTCANGLAQYALTNCTTIHPNLTIETSTGSPGSDC------GHWAEASYKTELMSPAVNIASLESNSLSRFTIGAMADIWGSVNYAEADPFSCSVGIASAS 880
            +NITL       TG  A   +A A+W  +IT   A I+L    D  +  F    ++G VDDI+I   + T+  P G+LG AGP   R +N   + G MRF    +D   S    ++VI HEM H +G GT+W+    L T    DTP    +  A  +A++     +   P         +P S C      GHW EA +  E+M+  +N     +N LS+ TIG++ D+  SVNY+ ADP++     AS+S
Sbjct:  123 YNITLRFTGTLTTGQQAAFDAAAAKWGQVITQGFASINLNISADECASGFP--AFNGSVDDILIDAAVVTIDGPGGILGQAGPCFTRISNDLTVYGIMRFDSADLDALESSGQLDEVIFHEMGHVLGIGTLWNYNRSLLTGAGTDTP---LFVGAKAVAEWQALGGSGNVPVENCRDKNNNPISGCGSGTRDGHWREAVFDNEVMTGYLNSG---ANPLSKVTIGSLEDLGYSVNYSAADPYTLPSLQASSS 366          
BLAST of NO30G00010 vs. NCBI_GenBank
Match: EWM21515.1 (hypothetical protein Naga_100317g3 [Nannochloropsis gaditana])

HSP 1 Score: 119.0 bits (297), Expect = 7.900e-23
Identity = 79/252 (31.35%), Postives = 125/252 (49.60%), Query Frame = 0
Query:   67 KVTYMLANTGYEKIRGAAIRIGLPSQ-NMTNNIKASKARKAQDLAIE--PGYAVYWLNVDLPRQKRLRFTVSFRLATKTCFARTINFPAYVYLIDSVSGSATCPSPATSIDVHVKGISSKR-RPCPTTPSPTAASNVTQSFLLIGVSEQCLEAGSQTPFENRRDLTMAEAKPFMTHADEEGRSFVQHQDLRGLQTAVINTLEDCWQYCSTFGGTPAPFYFNWNRDTSTCFCCGGTCTLVRNPAFLAFEVISA 315
            K+T +L N   + + G  I+I LPS  ++       +       A+E     A+YW ++D  R+ R R     ++    C  + +   A  YL ++ +   T P     + ++++   SKR   C  TP+P+   N+ + F+  G+ ++C EA    PF +RR       +  +     +  + V     R LQ   I+T + C++YCS  GG PAPF+FNWN   S C CC G CTL+R+PAF AF+VI A
Sbjct:   51 KLTVILRNK--DAVEGLNIKISLPSSLSVVRTTTRPRTPYVLPYAVENLEETAIYWSDIDFARRNR-RKLFHVKVQADDCAPKQLEINALAYLANATTTHCTVPLSKPEV-LNIRYAESKRTTTCVPTPAPSI--NLAEPFVPFGLGQRCAEASRLAPFGDRR------LQEHLERGRLQDNTRVISARARHLQG--IDTPQQCYEYCSLNGGAPAPFFFNWNTVASECLCCAGECTLIRDPAFDAFKVIVA 288          
BLAST of NO30G00010 vs. NCBI_GenBank
Match: WP_011530793.1 (Ig-like protein, group 2 [Deinococcus geothermalis] >ABF45960.1 metalloendopeptidase M8 containing Ig-like domains [Deinococcus geothermalis DSM 11300])

HSP 1 Score: 117.9 bits (294), Expect = 1.800e-22
Identity = 92/251 (36.65%), Postives = 131/251 (52.19%), Query Frame = 0
Query:  640 FNITLI---NVNQSETGLDAFMSSAQARWQNIITAEAADIDLGQTDLTSGRFAPYTYSGPVDDIIIFYELATL--PPGVLGSAGPTLVRTNNSQPIAGTMRF-SIDFFN--SGDITEDVILHEMAHAMGFGTVWD-LIGCLSTVCDEDTPSPVTYTCANGLAQYALTNCTTIHPNLTIETSTGSPGSDCGHWAEASYKTELMSPAVNIASLESNSLSRFTIGAMADIWGSVNYAEADPFSC-SVGIASASQ 881
            FNIT+I   N N +ET   AF S+A  RW  +I A   D+      L++G       +  VDD+ I      +  P  VLG AGP  VR   + P+ G M+F S D  N  +    + V+LHEM H +G GT+WD  +   ++ C+  T   V Y  A+GL +Y   N   +   + +E   G  G+ C HW E+ +++ELM+     AS     LSR T+GA+AD+  SVNYA ADP++  +VG  S  Q
Sbjct:  214 FNITVIFPANNNLTETQKAAFTSAAN-RWSQVIAAGLPDVP--NVRLSTGE------TVTVDDVTIVASGVAIDGPGNVLGQAGPRQVRNGTTLPLWGEMQFDSADLANMEANGTLQGVVLHEMGHVLGIGTLWDRSLSANASPCENAT--QVQYLGASGLREY--RNLGGLAAGVPVENQYGE-GTKCAHWKESVFQSELMT---GFASRGPMPLSRLTLGALADLGYSVNYAAADPYTIPNVGAQSLGQ 447          
BLAST of NO30G00010 vs. NCBI_GenBank
Match: WP_062157665.1 (hypothetical protein [Deinococcus actinosclerus] >ALW88332.1 hypothetical protein AUC44_05005 [Deinococcus actinosclerus])

HSP 1 Score: 115.9 bits (289), Expect = 6.700e-22
Identity = 78/240 (32.50%), Postives = 125/240 (52.08%), Query Frame = 0
Query:  640 FNITLINVNQSETGLDAFMSSAQARWQNIITAEAADIDLGQTDLTSGRFAPYTYSGPVDDIIIFYELATL--PPGVLGSAGPTLVRTNNSQPIAGTMRF-SIDFFNSGDITEDVILHEMAHAMGFGTVWDLIGCLSTVCDEDTPSPVTYTCANGLAQYALTNCTTIHPNLTIETSTGSPGSDCGHWAEASYKTELMSPAVNIASLESNSLSRFTIGAMADIWGSVNYAEADPFSCSVGIA 877
            +NITL     S+  +   M +A +RWQ +IT    D+ +     + G  A   YSG +DDI++F    ++  P G+L  +GP  VRT+       T+ F + D  N      D+ +HE+ H++G G++W   G +S V   +T +P+ Y   NG+ +Y     T     + +E   GS G+   HW E ++KTELM+  +N  S   N LSR ++G++ D+  +VNYA AD ++     A
Sbjct:   61 YNITLNFAAGSDASVVNAMQAAASRWQGVITQGQPDLTVSIPAGSCGSNA--AYSGTIDDILVFTGNKSIDGPGGILAQSGPCSVRTSTGLTTYSTLVFDTADLANFSSQLSDIAVHELGHSLGIGSLWSRFGLVSGV---NTTNPI-YKGTNGVREYRAAGGTL--TTVPVENQGGS-GTAGAHWRETTFKTELMTGYLN--SGVKNPLSRISVGSLQDMGYTVNYAAADAYTVPTATA 289          
BLAST of NO30G00010 vs. NCBI_GenBank
Match: ADG66306.1 (Parallel beta-helix repeat protein [Planctopirus limnophila DSM 3776])

HSP 1 Score: 114.0 bits (284), Expect = 2.500e-21
Identity = 87/255 (34.12%), Postives = 124/255 (48.63%), Query Frame = 0
Query:  640 FNITLINVNQSETGLDAFMSSAQARWQNIITAEAADIDLGQTDLTSGRFAPYTYSGPVDDIIIFYELATLP--PGVLGSAGPTLVRTNNSQPIAGTMRF-SIDFFN---SGDITEDVILHEMAHAMGFGTVWDLIGCLSTVCDEDTPSPVTYTCANGLAQYALTNCTTIHPNLTIETSTGSPGSDCGHWAEASYKTELMSPAVNIASLESNSLSRFTIGAMADIWGSVNYAEADPFSCSVGIASASQAQSDDAPI 889
            FNI ++ +        A  S A ARW  +IT + AD+DLG  D+             +DD+ I  E A +    G+LG AGP  +R  ++ P +G MRF S D  N   SG +  DVILHEM H +G GTVW+L G L       T  P  +T A   A+Y       +   + +E +TG PG+   HW E+ Y  ELM+  +N      N +SR T  ++AD    VN   +DP+  ++   S   + S  A +
Sbjct: 1465 FNIEVVLLGGLTPSQQAIFSQAAARWSQLITGDLADVDLGGGDI-------------IDDLRISAEGANIDGVGGILGQAGPNGIRAGSNLPYSGGMRFDSADLANLEASGQLF-DVILHEMGHVLGIGTVWNLQGLLQ---GGGTADP-RFTGAQATAEYN-ARFANVETGVPVE-NTGGPGTRDSHWRESIYDNELMTGFLNPG--VDNPISRTTTASLADQGYVVNINASDPYLQAITSGSTPSSPSSTAEV 1697          
BLAST of NO30G00010 vs. NCBI_GenBank
Match: WP_081440179.1 (hypothetical protein [Planctopirus limnophila])

HSP 1 Score: 114.0 bits (284), Expect = 2.500e-21
Identity = 87/255 (34.12%), Postives = 124/255 (48.63%), Query Frame = 0
Query:  640 FNITLINVNQSETGLDAFMSSAQARWQNIITAEAADIDLGQTDLTSGRFAPYTYSGPVDDIIIFYELATLP--PGVLGSAGPTLVRTNNSQPIAGTMRF-SIDFFN---SGDITEDVILHEMAHAMGFGTVWDLIGCLSTVCDEDTPSPVTYTCANGLAQYALTNCTTIHPNLTIETSTGSPGSDCGHWAEASYKTELMSPAVNIASLESNSLSRFTIGAMADIWGSVNYAEADPFSCSVGIASASQAQSDDAPI 889
            FNI ++ +        A  S A ARW  +IT + AD+DLG  D+             +DD+ I  E A +    G+LG AGP  +R  ++ P +G MRF S D  N   SG +  DVILHEM H +G GTVW+L G L       T  P  +T A   A+Y       +   + +E +TG PG+   HW E+ Y  ELM+  +N      N +SR T  ++AD    VN   +DP+  ++   S   + S  A +
Sbjct: 1502 FNIEVVLLGGLTPSQQAIFSQAAARWSQLITGDLADVDLGGGDI-------------IDDLRISAEGANIDGVGGILGQAGPNGIRAGSNLPYSGGMRFDSADLANLEASGQLF-DVILHEMGHVLGIGTVWNLQGLLQ---GGGTADP-RFTGAQATAEYN-ARFANVETGVPVE-NTGGPGTRDSHWRESIYDNELMTGFLNPG--VDNPISRTTTASLADQGYVVNINASDPYLQAITSGSTPSSPSSTAEV 1734          
The following BLAST results are available for this feature:
BLAST of NO30G00010 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005854957.13.000e-7851.60zinc metalloendopeptidase, partial [Nannochloropsi... [more]
EWM20104.11.200e-7452.01zinc metalloendopeptidase [Nannochloropsis gaditan... [more]
XP_013902575.19.000e-2735.56hypothetical protein MNEG_4401 [Monoraphidium negl... [more]
EWM26413.15.500e-2433.67hypothetical protein Naga_101468g1, partial [Nanno... [more]
WP_018467545.12.700e-2333.73PKD domain-containing protein [Meiothermus timidus... [more]
EWM21515.17.900e-2331.35hypothetical protein Naga_100317g3 [Nannochloropsi... [more]
WP_011530793.11.800e-2236.65Ig-like protein, group 2 [Deinococcus geothermalis... [more]
WP_062157665.16.700e-2232.50hypothetical protein [Deinococcus actinosclerus] >... [more]
ADG66306.12.500e-2134.12Parallel beta-helix repeat protein [Planctopirus l... [more]
WP_081440179.12.500e-2134.12hypothetical protein [Planctopirus limnophila][more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR074ncniR074Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO30G00010.1NO30G00010.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|643234gene_10503Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO30G00010.1NO30G00010.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO30G00010 ID=NO30G00010|Name=NO30G00010|organism=Nannochloropsis oceanica|type=gene|length=4381bp
ATGTTTTCGGCGATGGCCATCAAAAGGGCCAATGATAGGGTCGGTAGCAT
GACCGGTCGTGGAGTCCTGAGGTATGCGCTGACCATCCTTGCCTTGATGC
TGGCCTCTCCTTTCAATCAAGGCGGCCCTGTGGAGGCGACAACTTGCCCT
TTGTCTCTCAACTTCAAAACTTGCAAGCATGTCGTGGGTAGATCCATAAA
AGTGACCTATATGCTGGCCAACACCGGGTACGAGAAGATCCGGGGCGCGG
CGATACGGATCGGGCTGCCCAGTCAAAATATGACAAACAATATTAAGGCC
TCCAAGGCCCGCAAGGCACAAGATCTTGCCATTGAACCAGGCTATGCTGT
GTACTGGCTTAATGTAGATCTGCCCCGACAGAAACGACTGAGATTTACCG
TGAGCTTCAGGCTTGCCACAAAGACCTGCTTTGCCCGAACAATCAATTTT
CCTGCATATGTTTACCTGATCGACTCTGTTAGTGGGTCAGCAACATGTCC
GTCGCCAGCGACATCCATTGATGTCCATGTCAAGGGCATCTCCTCTAAGA
GGCGGCCTTGCCCTACCACACCCAGCCCGACCGCGGCAAGCAATGTGACG
CAGTCTTTTCTGCTCATTGGTGTGAGCGAGCAGTGTTTGGAGGCAGGAAG
CCAGACTCCTTTTGAGAATCGGCGTGATCTGACAATGGCGGAAGCTAAGC
CGTTCATGACTCATGCCGACGAGGAAGGAAGGAGCTTTGTTCAACATCAG
GATTTACGGGGCCTCCAGACGGCTGTCATTAATACACTCGAGGACTGCTG
GCAATATTGCAGCACATTCGGGGGCACACCCGCCCCATTTTACTTCAATT
GGAACAGAGATACAAGCACATGCTTTTGCTGTGGTGGAACCTGTACACTC
GTCCGTAATCCTGCCTTCCTTGCGTTTGAAGTGATCTCGGCGGCTCCGCG
ACCTTTCAACTCCACTAGCCCTACTATAGCGCCTTCAGCTTCGCCCACGA
CAGGATTGCCTACCGTTTCACCCTCTCTCACACCATCGGCCTCTCCCACG
ACAGGCAGCCCAAGCTCCCCCCCCTCTTTGAGCCCCACTGGCTCGCCCAG
TGCGTCTCCGTCTCTCGCCTCGTCGGCCTCTCCCACGACGGGTAGCCCTA
GTGCGTCTCCGTCTCTTGCCCCATCGGCCTTTCCCACGACAGGCAGCCCA
AGCTCCTCCCCCTCTTTGAGCCCCACTGGCTCGCCCAGTGCGTCTCCGTC
TCTCGCCTCGTCGGCCTCTCCCACGACGGGTAGCCCTAGTGCGTCTCCGT
CTCTTGCCCCATCGGCCTTTCCCACGACAGGCAGCCCAAGCTTCCCCCCC
TCTTTGAGCCCCACTGGCTCGCCCAGTGCGTCTCCGTCTCTCGCCTCGTC
GGCCTCTCCCACGACGGGTAGCCCTAGTGCGTCTCCTTCTCTTGCCCCAT
CGGCCTTTCCCACGACAGGCAGCCCAAGCTCCCCCCCCTCTTTGAGCCCC
ACTGGCTCGCCCAGTGCGTCTCCGTCTCTCGCCTCGTCGGCCTCTCCCAC
GACGGGTAGCCCTAGTGCGTCTCCTTCTCTTGCCCCATCGGCCTTTCCCA
CGACAGGCAGCCCAAGCTCCCCCCCCTCTTTGAGCCCCACTGGCTCGCCC
AGTGCGTCTCCGTCTCTCGCCTCGTCGGCCTCTCCCACGACGGGTAGCCC
TAGTGCGTCTCCGTCTCTTGCCCCATCGGCCTTTCCCACGACAGGCAGCC
CAAGCTCCTCCCCCTCTTTGAGCCCCACTGACTCGCCCAGTAGCAGTCCT
ACCACTCCACTCTCAGCAACACCAACTCAATCTCCCTCACTTTCGCCCAC
TACATCGCCTACCTCTGCTCCCTTCCTTTCACCCACTATGCTGCCCACCT
CTGCACCCACCTCTgtgagttgtaaacgaaatgcttcacgcgaaatggtt
cctcttacgctaaaaattatctattctcacgtcacacattacacagCCAT
TTAATATCACACTAATTAATGTGAACCAAAGTGAAACTGGATTGGACGCG
TTCATGTCGgtaagtccaagctttcattgaatctcatgtcaataaccgcc
acacaaccgatgccaaccgacctacatgcctttttctatcaactcctctc
cctgcatctacccacacagTCTGCTCAGGCCCGCTGGCAGAATATTATCA
CTGCCGAAGCAGCAGACATTGATTTAGGTCAAACTGACCTCACGAGCGGG
AGGTTTGCACCGTATACTTACTCTGGACCTGTTGACGATATTATTATCTT
TTATGAACTCGCAACCTTACCTCCTGGCGTATTGGGGTCAGCTGGACCAA
CTCTAGTCCGAACAAATAATTCTCAACCCATTGCGGGGACAATGAGATTT
AGTATCGATTTTTTCAATAGTGGCGATATAACAGAAGATGTAATTTTGCA
TGAAATGGCGCATGCCATGGGGTTCGGCACGgtaagtgtagtgagaaatg
gaaaggcaaagactggagctgaaataatgctcataaacgttgttgctcgc
gtgttttatgatgtcatgaaccaaaatgggggatttaactttcacttcaa
tggctgcaggtcaacgacgcacacaaacaaagggaaacccacaatccttc
gtctcaatttctttatgtgtccaaagttatcattatcatcatcatcgttt
gatactcttcatccattatgacagGTGTGGGACTTAATAGGCTGCCTTTC
GACGGTATGCGATGAAGACACCCCCTCGCCTGTCACTTACACCTGCGCAA
ATGGTCTCGCTCAATATGCCTTGACAAATTGTACGACTATTCATCCCAAC
CTTACCATCGAGACAAGCACTGGTTCTCCCGGTTCCGACTGTGGACATTG
GGCAGAGGCCTCTTACAAGACGGAGCTTATGTCACCGGCGgtacgactcg
tgctccctcgctccctcactgatatgtccgacctaatcgataccaacgta
tgcaacagGTTAATATAGCCAGTCTCGAATCGAACTCGCTCTCTCGTTTT
ACAATCGGAGCAATGGCAGATATTTGGGGCTCGGTCAACTACGCCGAGGC
TGACCCGTTCTCATGCTCGGTAGGCATTGCATCAGCCTCACAAGCTCAGT
CGGATGATGCACCAATTTCGGAGATGCTATACCCTCTAAATAGCGGCGAA
GTCATTCTCTCACTGGCTCTGGCTGGCCGGACCATTTATGACTACCAACT
TACGCGACTGTCAGAAGAGGACAAGCAAGCCGTAGTGGAAGCGTTGGCGA
GCCTGGGCAAGACCATCGTCACGACCGGACCCGACAGACGCCGTTATTAA
GTCTGTGTCGGTATGAGAGATAAATGGGACTTTATTTCTTCCGTTTTTCA
AAATTATTATATGTTTTGAGCGGTCCGGGGTGGCTTTTGGGGGATTCAAT
TGTCGACAGGCAGTAGAGCAGGAGCGATCTCATATCCATGAGACCAACTG
TTATCAGTCTTCCATGATCATAGTTCATAGCAGTCGAGGAATAAAGAGGA
AATCTAGAGAGGGAGAGAGATAAAGAGAGGCAGGGGGGTGTGAAAAAAGG
GCTTTGCTCACGGGCCATGTGAATGTGGGTTCGCGGAGCTAGCATATTTT
ATTACCCAGAGTGGACTACCAAATACGACAAACGGCTGACATATCTTGCG
GCGATAGAAGGAAGAAAGGGTGTGGCCAGGAAGATAGAAAAACGAGCACG
AAAAGCAGGGCACAGACATGATAGCGATTGGAAAAAACAAGAACGAAAAC
CCCCCCAAAACAAAAGAGATAAAAAAGAGGAAGGAAGACAACCGTGGACA
CACACATTGACCCCGATCGTAGTGATAAGTACCGTGATGCATGGCACCCT
TCATCTAAAAACAGAATTTGTAATAATTCGACAAGTAGGATCGATAAACC
GCTTTAACGAGCTAGAGCTCTAAGATTTGCAAGATATTTGTGAACTGCAT
CTGCAAATGCAGCTATGGAGCGAGATGAAGAAGCCAAAAACAAAACAGAA
ATAGAAACCGATAGGAAGAGTGATGTTGGAAGAGGAGAGTGGATCTCGAA
TAAGGCGAATTATACAGAAAGTTGTGTACATTTTTTGCTCTTTTTACTTT
TTTGGGGTTTTAATCCCTATATGCAGGAGGGGTGAAACTTGGACCAAGTT
CCTCCGTTCCGATCCTTCCCGAAAGGCAACAAAGTCAACCAAATGACCGA
TGCTACTGCCAAGGAACGCAACATTTCCTTCTTTCTTCGGTATTTATGCA
TCCTTCTTCAAGGTCATCTTTGGTTTCTTCCTCGCTCCACCCGACCTCTT
CTGTTTTCTCCTGACTTTCTCCGACCCCGAC
back to top

protein sequence of NO30G00010.1

>NO30G00010.1-protein ID=NO30G00010.1-protein|Name=NO30G00010.1|organism=Nannochloropsis oceanica|type=polypeptide|length=949bp
MFSAMAIKRANDRVGSMTGRGVLRYALTILALMLASPFNQGGPVEATTCP
LSLNFKTCKHVVGRSIKVTYMLANTGYEKIRGAAIRIGLPSQNMTNNIKA
SKARKAQDLAIEPGYAVYWLNVDLPRQKRLRFTVSFRLATKTCFARTINF
PAYVYLIDSVSGSATCPSPATSIDVHVKGISSKRRPCPTTPSPTAASNVT
QSFLLIGVSEQCLEAGSQTPFENRRDLTMAEAKPFMTHADEEGRSFVQHQ
DLRGLQTAVINTLEDCWQYCSTFGGTPAPFYFNWNRDTSTCFCCGGTCTL
VRNPAFLAFEVISAAPRPFNSTSPTIAPSASPTTGLPTVSPSLTPSASPT
TGSPSSPPSLSPTGSPSASPSLASSASPTTGSPSASPSLAPSAFPTTGSP
SSSPSLSPTGSPSASPSLASSASPTTGSPSASPSLAPSAFPTTGSPSFPP
SLSPTGSPSASPSLASSASPTTGSPSASPSLAPSAFPTTGSPSSPPSLSP
TGSPSASPSLASSASPTTGSPSASPSLAPSAFPTTGSPSSPPSLSPTGSP
SASPSLASSASPTTGSPSASPSLAPSAFPTTGSPSSSPSLSPTDSPSSSP
TTPLSATPTQSPSLSPTTSPTSAPFLSPTMLPTSAPTSPFNITLINVNQS
ETGLDAFMSSAQARWQNIITAEAADIDLGQTDLTSGRFAPYTYSGPVDDI
IIFYELATLPPGVLGSAGPTLVRTNNSQPIAGTMRFSIDFFNSGDITEDV
ILHEMAHAMGFGTVWDLIGCLSTVCDEDTPSPVTYTCANGLAQYALTNCT
TIHPNLTIETSTGSPGSDCGHWAEASYKTELMSPAVNIASLESNSLSRFT
IGAMADIWGSVNYAEADPFSCSVGIASASQAQSDDAPISEMLYPLNSGEV
ILSLALAGRTIYDYQLTRLSEEDKQAVVEALASLGKTIVTTGPDRRRY*
back to top
Synonyms
Publications