NO30G00010.1, NO30G00010.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO30G00010.1
Unique Name	NO30G00010.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3878
Alignment location	chr30:578..4958 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr30	genome	chr30:578..4958 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO30G00010.1 vs.
Match: XP_005854957.1 (zinc metalloendopeptidase, partial [Nannochloropsis gaditana CCMP526]; EKU21397.1 zinc metalloendopeptidase, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 316.2 bits (809), Expect = 3.400e-82
Identity = 174/340 (51.18%), Postives = 222/340 (65.29%), Query Frame = 0

Query:  612 PSLSPTTSPTSAPFLSPTMLPTSAPTSPFNITLINVNQSETGLDAFMSSAQARWQNIITAEAADIDL-GQTDLTSGRFAPY--TYSGPVDDIIIFYELATLPPGVLGSAGPTLVRTNNSQPIAGTMRFSIDFFNSGDITEDVILHEMAHAMGFGTVWDLIGCLSTVCDEDTPSPVTYTCANGLAQYALTNCTTIH-PNLTIETSTGSPGSDCGHWAEASYKTELMSPAVNIASLESNSLSRFTIGAMADIWGSVNYAEADPFSCSVGIASASQAQSDDAPISEMLYPLNSGEVILSLALAGRTIYDYQLTRLSEEDKQAVVEALASLGKTIVTTGPDRRR 948
            P+ +  T  T AP  SPT+ PT  PTS FNITLIN   ++T +D+ M SA+ARW  II A  + +   G  DLT GRF P    Y   VDDIIIFY LATL PGVLGSAGPT VRT + QP A TM FS  FF++ ++TED ILHEMAHA+GFG VWD +GC ST C   + + V+Y C  G+AQY  TNC  +  P+L IETS+GS GSDCGHW EA Y  ELM+P   I  ++   LSRFTIGAM+DIWG VN  EA+ F+C  G+ +AS   S     S +L P+N  + ++  A  G T+Y++QL  L+  ++Q VV+ALA++GKT+    P  R+
Sbjct:    1 PTTAAPTGATPAPTPSPTIAPTPQPTSLFNITLINAQPNDTRMDSMMISAKARWTGIILATPSSVPFSGTDDLTGGRFLPEFGPYYSAVDDIIIFYRLATLSPGVLGSAGPTFVRTPSFQPYAATMEFSTTFFDASEVTEDTILHEMAHALGFGLVWDELGCYSTTCTVGSNANVSYICDQGVAQYNQTNCPDVGLPDLLIETSSGSAGSDCGHWTEADYDNELMTPISEIPEVD-QPLSRFTIGAMSDIWGPVNVLEANNFTCP-GVGAAS-VMSGPQHTSILLRPVNIKDALIQGAAMGETVYEHQLVNLTPAERQEVVDALAAMGKTVDQASPHERQ 337

The following BLAST results are available for this feature:

BLAST of NO30G00010.1 vs.

BLAST of NO30G00010.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
XP_005854957.1	3.400e-82	51.18	zinc metalloendopeptidase, partial [Nannochloropsi...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO30G00010	NO30G00010	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO30G00010.1	NO30G00010.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO30G00010.1.cds1	NO30G00010.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO30G00010.1.cds2	NO30G00010.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO30G00010.1.cds3	NO30G00010.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO30G00010.1.cds4	NO30G00010.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO30G00010.1.cds5	NO30G00010.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr30:578..4958-
coding sequence from alignment at chr30:578..4958-

mRNA sequence

>NO30G00010.1 ID=NO30G00010.1|Name=NO30G00010.1|organism=Nannochloropsis oceanica|type=mRNA|length=3878bp
ATGTTTTCGGCGATGGCCATCAAAAGGGCCAATGATAGGGTCGGTAGCAT
GACCGGTCGTGGAGTCCTGAGGTATGCGCTGACCATCCTTGCCTTGATGC
TGGCCTCTCCTTTCAATCAAGGCGGCCCTGTGGAGGCGACAACTTGCCCT
TTGTCTCTCAACTTCAAAACTTGCAAGCATGTCGTGGGTAGATCCATAAA
AGTGACCTATATGCTGGCCAACACCGGGTACGAGAAGATCCGGGGCGCGG
CGATACGGATCGGGCTGCCCAGTCAAAATATGACAAACAATATTAAGGCC
TCCAAGGCCCGCAAGGCACAAGATCTTGCCATTGAACCAGGCTATGCTGT
GTACTGGCTTAATGTAGATCTGCCCCGACAGAAACGACTGAGATTTACCG
TGAGCTTCAGGCTTGCCACAAAGACCTGCTTTGCCCGAACAATCAATTTT
CCTGCATATGTTTACCTGATCGACTCTGTTAGTGGGTCAGCAACATGTCC
GTCGCCAGCGACATCCATTGATGTCCATGTCAAGGGCATCTCCTCTAAGA
GGCGGCCTTGCCCTACCACACCCAGCCCGACCGCGGCAAGCAATGTGACG
CAGTCTTTTCTGCTCATTGGTGTGAGCGAGCAGTGTTTGGAGGCAGGAAG
CCAGACTCCTTTTGAGAATCGGCGTGATCTGACAATGGCGGAAGCTAAGC
CGTTCATGACTCATGCCGACGAGGAAGGAAGGAGCTTTGTTCAACATCAG
GATTTACGGGGCCTCCAGACGGCTGTCATTAATACACTCGAGGACTGCTG
GCAATATTGCAGCACATTCGGGGGCACACCCGCCCCATTTTACTTCAATT
GGAACAGAGATACAAGCACATGCTTTTGCTGTGGTGGAACCTGTACACTC
GTCCGTAATCCTGCCTTCCTTGCGTTTGAAGTGATCTCGGCGGCTCCGCG
ACCTTTCAACTCCACTAGCCCTACTATAGCGCCTTCAGCTTCGCCCACGA
CAGGATTGCCTACCGTTTCACCCTCTCTCACACCATCGGCCTCTCCCACG
ACAGGCAGCCCAAGCTCCCCCCCCTCTTTGAGCCCCACTGGCTCGCCCAG
TGCGTCTCCGTCTCTCGCCTCGTCGGCCTCTCCCACGACGGGTAGCCCTA
GTGCGTCTCCGTCTCTTGCCCCATCGGCCTTTCCCACGACAGGCAGCCCA
AGCTCCTCCCCCTCTTTGAGCCCCACTGGCTCGCCCAGTGCGTCTCCGTC
TCTCGCCTCGTCGGCCTCTCCCACGACGGGTAGCCCTAGTGCGTCTCCGT
CTCTTGCCCCATCGGCCTTTCCCACGACAGGCAGCCCAAGCTTCCCCCCC
TCTTTGAGCCCCACTGGCTCGCCCAGTGCGTCTCCGTCTCTCGCCTCGTC
GGCCTCTCCCACGACGGGTAGCCCTAGTGCGTCTCCTTCTCTTGCCCCAT
CGGCCTTTCCCACGACAGGCAGCCCAAGCTCCCCCCCCTCTTTGAGCCCC
ACTGGCTCGCCCAGTGCGTCTCCGTCTCTCGCCTCGTCGGCCTCTCCCAC
GACGGGTAGCCCTAGTGCGTCTCCTTCTCTTGCCCCATCGGCCTTTCCCA
CGACAGGCAGCCCAAGCTCCCCCCCCTCTTTGAGCCCCACTGGCTCGCCC
AGTGCGTCTCCGTCTCTCGCCTCGTCGGCCTCTCCCACGACGGGTAGCCC
TAGTGCGTCTCCGTCTCTTGCCCCATCGGCCTTTCCCACGACAGGCAGCC
CAAGCTCCTCCCCCTCTTTGAGCCCCACTGACTCGCCCAGTAGCAGTCCT
ACCACTCCACTCTCAGCAACACCAACTCAATCTCCCTCACTTTCGCCCAC
TACATCGCCTACCTCTGCTCCCTTCCTTTCACCCACTATGCTGCCCACCT
CTGCACCCACCTCTCCATTTAATATCACACTAATTAATGTGAACCAAAGT
GAAACTGGATTGGACGCGTTCATGTCGTCTGCTCAGGCCCGCTGGCAGAA
TATTATCACTGCCGAAGCAGCAGACATTGATTTAGGTCAAACTGACCTCA
CGAGCGGGAGGTTTGCACCGTATACTTACTCTGGACCTGTTGACGATATT
ATTATCTTTTATGAACTCGCAACCTTACCTCCTGGCGTATTGGGGTCAGC
TGGACCAACTCTAGTCCGAACAAATAATTCTCAACCCATTGCGGGGACAA
TGAGATTTAGTATCGATTTTTTCAATAGTGGCGATATAACAGAAGATGTA
ATTTTGCATGAAATGGCGCATGCCATGGGGTTCGGCACGGTGTGGGACTT
AATAGGCTGCCTTTCGACGGTATGCGATGAAGACACCCCCTCGCCTGTCA
CTTACACCTGCGCAAATGGTCTCGCTCAATATGCCTTGACAAATTGTACG
ACTATTCATCCCAACCTTACCATCGAGACAAGCACTGGTTCTCCCGGTTC
CGACTGTGGACATTGGGCAGAGGCCTCTTACAAGACGGAGCTTATGTCAC
CGGCGGTTAATATAGCCAGTCTCGAATCGAACTCGCTCTCTCGTTTTACA
ATCGGAGCAATGGCAGATATTTGGGGCTCGGTCAACTACGCCGAGGCTGA
CCCGTTCTCATGCTCGGTAGGCATTGCATCAGCCTCACAAGCTCAGTCGG
ATGATGCACCAATTTCGGAGATGCTATACCCTCTAAATAGCGGCGAAGTC
ATTCTCTCACTGGCTCTGGCTGGCCGGACCATTTATGACTACCAACTTAC
GCGACTGTCAGAAGAGGACAAGCAAGCCGTAGTGGAAGCGTTGGCGAGCC
TGGGCAAGACCATCGTCACGACCGGACCCGACAGACGCCGTTATTAAGTC
TGTGTCGGTATGAGAGATAAATGGGACTTTATTTCTTCCGTTTTTCAAAA
TTATTATATGTTTTGAGCGGTCCGGGGTGGCTTTTGGGGGATTCAATTGT
CGACAGGCAGTAGAGCAGGAGCGATCTCATATCCATGAGACCAACTGTTA
TCAGTCTTCCATGATCATAGTTCATAGCAGTCGAGGAATAAAGAGGAAAT
CTAGAGAGGGAGAGAGATAAAGAGAGGCAGGGGGGTGTGAAAAAAGGGCT
TTGCTCACGGGCCATGTGAATGTGGGTTCGCGGAGCTAGCATATTTTATT
ACCCAGAGTGGACTACCAAATACGACAAACGGCTGACATATCTTGCGGCG
ATAGAAGGAAGAAAGGGTGTGGCCAGGAAGATAGAAAAACGAGCACGAAA
AGCAGGGCACAGACATGATAGCGATTGGAAAAAACAAGAACGAAAACCCC
CCCAAAACAAAAGAGATAAAAAAGAGGAAGGAAGACAACCGTGGACACAC
ACATTGACCCCGATCGTAGTGATAAGTACCGTGATGCATGGCACCCTTCA
TCTAAAAACAGAATTTGTAATAATTCGACAAGTAGGATCGATAAACCGCT
TTAACGAGCTAGAGCTCTAAGATTTGCAAGATATTTGTGAACTGCATCTG
CAAATGCAGCTATGGAGCGAGATGAAGAAGCCAAAAACAAAACAGAAATA
GAAACCGATAGGAAGAGTGATGTTGGAAGAGGAGAGTGGATCTCGAATAA
GGCGAATTATACAGAAAGTTGTGTACATTTTTTGCTCTTTTTACTTTTTT
GGGGTTTTAATCCCTATATGCAGGAGGGGTGAAACTTGGACCAAGTTCCT
CCGTTCCGATCCTTCCCGAAAGGCAACAAAGTCAACCAAATGACCGATGC
TACTGCCAAGGAACGCAACATTTCCTTCTTTCTTCGGTATTTATGCATCC
TTCTTCAAGGTCATCTTTGGTTTCTTCCTCGCTCCACCCGACCTCTTCTG
TTTTCTCCTGACTTTCTCCGACCCCGAC

protein sequence of NO30G00010.1

>NO30G00010.1-protein ID=NO30G00010.1-protein|Name=NO30G00010.1|organism=Nannochloropsis oceanica|type=polypeptide|length=949bp
MFSAMAIKRANDRVGSMTGRGVLRYALTILALMLASPFNQGGPVEATTCP
LSLNFKTCKHVVGRSIKVTYMLANTGYEKIRGAAIRIGLPSQNMTNNIKA
SKARKAQDLAIEPGYAVYWLNVDLPRQKRLRFTVSFRLATKTCFARTINF
PAYVYLIDSVSGSATCPSPATSIDVHVKGISSKRRPCPTTPSPTAASNVT
QSFLLIGVSEQCLEAGSQTPFENRRDLTMAEAKPFMTHADEEGRSFVQHQ
DLRGLQTAVINTLEDCWQYCSTFGGTPAPFYFNWNRDTSTCFCCGGTCTL
VRNPAFLAFEVISAAPRPFNSTSPTIAPSASPTTGLPTVSPSLTPSASPT
TGSPSSPPSLSPTGSPSASPSLASSASPTTGSPSASPSLAPSAFPTTGSP
SSSPSLSPTGSPSASPSLASSASPTTGSPSASPSLAPSAFPTTGSPSFPP
SLSPTGSPSASPSLASSASPTTGSPSASPSLAPSAFPTTGSPSSPPSLSP
TGSPSASPSLASSASPTTGSPSASPSLAPSAFPTTGSPSSPPSLSPTGSP
SASPSLASSASPTTGSPSASPSLAPSAFPTTGSPSSSPSLSPTDSPSSSP
TTPLSATPTQSPSLSPTTSPTSAPFLSPTMLPTSAPTSPFNITLINVNQS
ETGLDAFMSSAQARWQNIITAEAADIDLGQTDLTSGRFAPYTYSGPVDDI
IIFYELATLPPGVLGSAGPTLVRTNNSQPIAGTMRFSIDFFNSGDITEDV
ILHEMAHAMGFGTVWDLIGCLSTVCDEDTPSPVTYTCANGLAQYALTNCT
TIHPNLTIETSTGSPGSDCGHWAEASYKTELMSPAVNIASLESNSLSRFT
IGAMADIWGSVNYAEADPFSCSVGIASASQAQSDDAPISEMLYPLNSGEV
ILSLALAGRTIYDYQLTRLSEEDKQAVVEALASLGKTIVTTGPDRRRY*

mRNA from alignment at chr30:578..4958-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO30G00010.1 ID=NO30G00010.1|Name=NO30G00010.1|organism=Nannochloropsis oceanica|type=mRNA|length=4381bp|location=Sequence derived from alignment at chr30:578..4958- (Nannochloropsis oceanica)
ATGTTTTCGGCGATGGCCATCAAAAGGGCCAATGATAGGGTCGGTAGCAT
GACCGGTCGTGGAGTCCTGAGGTATGCGCTGACCATCCTTGCCTTGATGC
TGGCCTCTCCTTTCAATCAAGGCGGCCCTGTGGAGGCGACAACTTGCCCT
TTGTCTCTCAACTTCAAAACTTGCAAGCATGTCGTGGGTAGATCCATAAA
AGTGACCTATATGCTGGCCAACACCGGGTACGAGAAGATCCGGGGCGCGG
CGATACGGATCGGGCTGCCCAGTCAAAATATGACAAACAATATTAAGGCC
TCCAAGGCCCGCAAGGCACAAGATCTTGCCATTGAACCAGGCTATGCTGT
GTACTGGCTTAATGTAGATCTGCCCCGACAGAAACGACTGAGATTTACCG
TGAGCTTCAGGCTTGCCACAAAGACCTGCTTTGCCCGAACAATCAATTTT
CCTGCATATGTTTACCTGATCGACTCTGTTAGTGGGTCAGCAACATGTCC
GTCGCCAGCGACATCCATTGATGTCCATGTCAAGGGCATCTCCTCTAAGA
GGCGGCCTTGCCCTACCACACCCAGCCCGACCGCGGCAAGCAATGTGACG
CAGTCTTTTCTGCTCATTGGTGTGAGCGAGCAGTGTTTGGAGGCAGGAAG
CCAGACTCCTTTTGAGAATCGGCGTGATCTGACAATGGCGGAAGCTAAGC
CGTTCATGACTCATGCCGACGAGGAAGGAAGGAGCTTTGTTCAACATCAG
GATTTACGGGGCCTCCAGACGGCTGTCATTAATACACTCGAGGACTGCTG
GCAATATTGCAGCACATTCGGGGGCACACCCGCCCCATTTTACTTCAATT
GGAACAGAGATACAAGCACATGCTTTTGCTGTGGTGGAACCTGTACACTC
GTCCGTAATCCTGCCTTCCTTGCGTTTGAAGTGATCTCGGCGGCTCCGCG
ACCTTTCAACTCCACTAGCCCTACTATAGCGCCTTCAGCTTCGCCCACGA
CAGGATTGCCTACCGTTTCACCCTCTCTCACACCATCGGCCTCTCCCACG
ACAGGCAGCCCAAGCTCCCCCCCCTCTTTGAGCCCCACTGGCTCGCCCAG
TGCGTCTCCGTCTCTCGCCTCGTCGGCCTCTCCCACGACGGGTAGCCCTA
GTGCGTCTCCGTCTCTTGCCCCATCGGCCTTTCCCACGACAGGCAGCCCA
AGCTCCTCCCCCTCTTTGAGCCCCACTGGCTCGCCCAGTGCGTCTCCGTC
TCTCGCCTCGTCGGCCTCTCCCACGACGGGTAGCCCTAGTGCGTCTCCGT
CTCTTGCCCCATCGGCCTTTCCCACGACAGGCAGCCCAAGCTTCCCCCCC
TCTTTGAGCCCCACTGGCTCGCCCAGTGCGTCTCCGTCTCTCGCCTCGTC
GGCCTCTCCCACGACGGGTAGCCCTAGTGCGTCTCCTTCTCTTGCCCCAT
CGGCCTTTCCCACGACAGGCAGCCCAAGCTCCCCCCCCTCTTTGAGCCCC
ACTGGCTCGCCCAGTGCGTCTCCGTCTCTCGCCTCGTCGGCCTCTCCCAC
GACGGGTAGCCCTAGTGCGTCTCCTTCTCTTGCCCCATCGGCCTTTCCCA
CGACAGGCAGCCCAAGCTCCCCCCCCTCTTTGAGCCCCACTGGCTCGCCC
AGTGCGTCTCCGTCTCTCGCCTCGTCGGCCTCTCCCACGACGGGTAGCCC
TAGTGCGTCTCCGTCTCTTGCCCCATCGGCCTTTCCCACGACAGGCAGCC
CAAGCTCCTCCCCCTCTTTGAGCCCCACTGACTCGCCCAGTAGCAGTCCT
ACCACTCCACTCTCAGCAACACCAACTCAATCTCCCTCACTTTCGCCCAC
TACATCGCCTACCTCTGCTCCCTTCCTTTCACCCACTATGCTGCCCACCT
CTGCACCCACCTCTGTGAGTTGTAAACGAAATGCTTCACGCGAAATGGTT
CCTCTTACGCTAAAAATTATCTATTCTCACGTCACACATTACACAGCCAT
TTAATATCACACTAATTAATGTGAACCAAAGTGAAACTGGATTGGACGCG
TTCATGTCGGTAAGTCCAAGCTTTCATTGAATCTCATGTCAATAACCGCC
ACACAACCGATGCCAACCGACCTACATGCCTTTTTCTATCAACTCCTCTC
CCTGCATCTACCCACACAGTCTGCTCAGGCCCGCTGGCAGAATATTATCA
CTGCCGAAGCAGCAGACATTGATTTAGGTCAAACTGACCTCACGAGCGGG
AGGTTTGCACCGTATACTTACTCTGGACCTGTTGACGATATTATTATCTT
TTATGAACTCGCAACCTTACCTCCTGGCGTATTGGGGTCAGCTGGACCAA
CTCTAGTCCGAACAAATAATTCTCAACCCATTGCGGGGACAATGAGATTT
AGTATCGATTTTTTCAATAGTGGCGATATAACAGAAGATGTAATTTTGCA
TGAAATGGCGCATGCCATGGGGTTCGGCACGGTAAGTGTAGTGAGAAATG
GAAAGGCAAAGACTGGAGCTGAAATAATGCTCATAAACGTTGTTGCTCGC
GTGTTTTATGATGTCATGAACCAAAATGGGGGATTTAACTTTCACTTCAA
TGGCTGCAGGTCAACGACGCACACAAACAAAGGGAAACCCACAATCCTTC
GTCTCAATTTCTTTATGTGTCCAAAGTTATCATTATCATCATCATCGTTT
GATACTCTTCATCCATTATGACAGGTGTGGGACTTAATAGGCTGCCTTTC
GACGGTATGCGATGAAGACACCCCCTCGCCTGTCACTTACACCTGCGCAA
ATGGTCTCGCTCAATATGCCTTGACAAATTGTACGACTATTCATCCCAAC
CTTACCATCGAGACAAGCACTGGTTCTCCCGGTTCCGACTGTGGACATTG
GGCAGAGGCCTCTTACAAGACGGAGCTTATGTCACCGGCGGTACGACTCG
TGCTCCCTCGCTCCCTCACTGATATGTCCGACCTAATCGATACCAACGTA
TGCAACAGGTTAATATAGCCAGTCTCGAATCGAACTCGCTCTCTCGTTTT
ACAATCGGAGCAATGGCAGATATTTGGGGCTCGGTCAACTACGCCGAGGC
TGACCCGTTCTCATGCTCGGTAGGCATTGCATCAGCCTCACAAGCTCAGT
CGGATGATGCACCAATTTCGGAGATGCTATACCCTCTAAATAGCGGCGAA
GTCATTCTCTCACTGGCTCTGGCTGGCCGGACCATTTATGACTACCAACT
TACGCGACTGTCAGAAGAGGACAAGCAAGCCGTAGTGGAAGCGTTGGCGA
GCCTGGGCAAGACCATCGTCACGACCGGACCCGACAGACGCCGTTATTAA
GTCTGTGTCGGTATGAGAGATAAATGGGACTTTATTTCTTCCGTTTTTCA
AAATTATTATATGTTTTGAGCGGTCCGGGGTGGCTTTTGGGGGATTCAAT
TGTCGACAGGCAGTAGAGCAGGAGCGATCTCATATCCATGAGACCAACTG
TTATCAGTCTTCCATGATCATAGTTCATAGCAGTCGAGGAATAAAGAGGA
AATCTAGAGAGGGAGAGAGATAAAGAGAGGCAGGGGGGTGTGAAAAAAGG
GCTTTGCTCACGGGCCATGTGAATGTGGGTTCGCGGAGCTAGCATATTTT
ATTACCCAGAGTGGACTACCAAATACGACAAACGGCTGACATATCTTGCG
GCGATAGAAGGAAGAAAGGGTGTGGCCAGGAAGATAGAAAAACGAGCACG
AAAAGCAGGGCACAGACATGATAGCGATTGGAAAAAACAAGAACGAAAAC
CCCCCCAAAACAAAAGAGATAAAAAAGAGGAAGGAAGACAACCGTGGACA
CACACATTGACCCCGATCGTAGTGATAAGTACCGTGATGCATGGCACCCT
TCATCTAAAAACAGAATTTGTAATAATTCGACAAGTAGGATCGATAAACC
GCTTTAACGAGCTAGAGCTCTAAGATTTGCAAGATATTTGTGAACTGCAT
CTGCAAATGCAGCTATGGAGCGAGATGAAGAAGCCAAAAACAAAACAGAA
ATAGAAACCGATAGGAAGAGTGATGTTGGAAGAGGAGAGTGGATCTCGAA
TAAGGCGAATTATACAGAAAGTTGTGTACATTTTTTGCTCTTTTTACTTT
TTTGGGGTTTTAATCCCTATATGCAGGAGGGGTGAAACTTGGACCAAGTT
CCTCCGTTCCGATCCTTCCCGAAAGGCAACAAAGTCAACCAAATGACCGA
TGCTACTGCCAAGGAACGCAACATTTCCTTCTTTCTTCGGTATTTATGCA
TCCTTCTTCAAGGTCATCTTTGGTTTCTTCCTCGCTCCACCCGACCTCTT
CTGTTTTCTCCTGACTTTCTCCGACCCCGAC

Coding sequence (CDS) from alignment at chr30:578..4958-

>NO30G00010.1 ID=NO30G00010.1|Name=NO30G00010.1|organism=Nannochloropsis oceanica|type=CDS|length=2847bp|location=Sequence derived from alignment at chr30:578..4958- (Nannochloropsis oceanica)
ATGTTTTCGGCGATGGCCATCAAAAGGGCCAATGATAGGGTCGGTAGCAT
GACCGGTCGTGGAGTCCTGAGGTATGCGCTGACCATCCTTGCCTTGATGC
TGGCCTCTCCTTTCAATCAAGGCGGCCCTGTGGAGGCGACAACTTGCCCT
TTGTCTCTCAACTTCAAAACTTGCAAGCATGTCGTGGGTAGATCCATAAA
AGTGACCTATATGCTGGCCAACACCGGGTACGAGAAGATCCGGGGCGCGG
CGATACGGATCGGGCTGCCCAGTCAAAATATGACAAACAATATTAAGGCC
TCCAAGGCCCGCAAGGCACAAGATCTTGCCATTGAACCAGGCTATGCTGT
GTACTGGCTTAATGTAGATCTGCCCCGACAGAAACGACTGAGATTTACCG
TGAGCTTCAGGCTTGCCACAAAGACCTGCTTTGCCCGAACAATCAATTTT
CCTGCATATGTTTACCTGATCGACTCTGTTAGTGGGTCAGCAACATGTCC
GTCGCCAGCGACATCCATTGATGTCCATGTCAAGGGCATCTCCTCTAAGA
GGCGGCCTTGCCCTACCACACCCAGCCCGACCGCGGCAAGCAATGTGACG
CAGTCTTTTCTGCTCATTGGTGTGAGCGAGCAGTGTTTGGAGGCAGGAAG
CCAGACTCCTTTTGAGAATCGGCGTGATCTGACAATGGCGGAAGCTAAGC
CGTTCATGACTCATGCCGACGAGGAAGGAAGGAGCTTTGTTCAACATCAG
GATTTACGGGGCCTCCAGACGGCTGTCATTAATACACTCGAGGACTGCTG
GCAATATTGCAGCACATTCGGGGGCACACCCGCCCCATTTTACTTCAATT
GGAACAGAGATACAAGCACATGCTTTTGCTGTGGTGGAACCTGTACACTC
GTCCGTAATCCTGCCTTCCTTGCGTTTGAAGTGATCTCGGCGGCTCCGCG
ACCTTTCAACTCCACTAGCCCTACTATAGCGCCTTCAGCTTCGCCCACGA
CAGGATTGCCTACCGTTTCACCCTCTCTCACACCATCGGCCTCTCCCACG
ACAGGCAGCCCAAGCTCCCCCCCCTCTTTGAGCCCCACTGGCTCGCCCAG
TGCGTCTCCGTCTCTCGCCTCGTCGGCCTCTCCCACGACGGGTAGCCCTA
GTGCGTCTCCGTCTCTTGCCCCATCGGCCTTTCCCACGACAGGCAGCCCA
AGCTCCTCCCCCTCTTTGAGCCCCACTGGCTCGCCCAGTGCGTCTCCGTC
TCTCGCCTCGTCGGCCTCTCCCACGACGGGTAGCCCTAGTGCGTCTCCGT
CTCTTGCCCCATCGGCCTTTCCCACGACAGGCAGCCCAAGCTTCCCCCCC
TCTTTGAGCCCCACTGGCTCGCCCAGTGCGTCTCCGTCTCTCGCCTCGTC
GGCCTCTCCCACGACGGGTAGCCCTAGTGCGTCTCCTTCTCTTGCCCCAT
CGGCCTTTCCCACGACAGGCAGCCCAAGCTCCCCCCCCTCTTTGAGCCCC
ACTGGCTCGCCCAGTGCGTCTCCGTCTCTCGCCTCGTCGGCCTCTCCCAC
GACGGGTAGCCCTAGTGCGTCTCCTTCTCTTGCCCCATCGGCCTTTCCCA
CGACAGGCAGCCCAAGCTCCCCCCCCTCTTTGAGCCCCACTGGCTCGCCC
AGTGCGTCTCCGTCTCTCGCCTCGTCGGCCTCTCCCACGACGGGTAGCCC
TAGTGCGTCTCCGTCTCTTGCCCCATCGGCCTTTCCCACGACAGGCAGCC
CAAGCTCCTCCCCCTCTTTGAGCCCCACTGACTCGCCCAGTAGCAGTCCT
ACCACTCCACTCTCAGCAACACCAACTCAATCTCCCTCACTTTCGCCCAC
TACATCGCCTACCTCTGCTCCCTTCCTTTCACCCACTATGCTGCCCACCT
CTGCACCCACCTCTCCATTTAATATCACACTAATTAATGTGAACCAAAGT
GAAACTGGATTGGACGCGTTCATGTCGTCTGCTCAGGCCCGCTGGCAGAA
TATTATCACTGCCGAAGCAGCAGACATTGATTTAGGTCAAACTGACCTCA
CGAGCGGGAGGTTTGCACCGTATACTTACTCTGGACCTGTTGACGATATT
ATTATCTTTTATGAACTCGCAACCTTACCTCCTGGCGTATTGGGGTCAGC
TGGACCAACTCTAGTCCGAACAAATAATTCTCAACCCATTGCGGGGACAA
TGAGATTTAGTATCGATTTTTTCAATAGTGGCGATATAACAGAAGATGTA
ATTTTGCATGAAATGGCGCATGCCATGGGGTTCGGCACGGTGTGGGACTT
AATAGGCTGCCTTTCGACGGTATGCGATGAAGACACCCCCTCGCCTGTCA
CTTACACCTGCGCAAATGGTCTCGCTCAATATGCCTTGACAAATTGTACG
ACTATTCATCCCAACCTTACCATCGAGACAAGCACTGGTTCTCCCGGTTC
CGACTGTGGACATTGGGCAGAGGCCTCTTACAAGACGGAGCTTATGTCAC
CGGCGGTTAATATAGCCAGTCTCGAATCGAACTCGCTCTCTCGTTTTACA
ATCGGAGCAATGGCAGATATTTGGGGCTCGGTCAACTACGCCGAGGCTGA
CCCGTTCTCATGCTCGGTAGGCATTGCATCAGCCTCACAAGCTCAGTCGG
ATGATGCACCAATTTCGGAGATGCTATACCCTCTAAATAGCGGCGAAGTC
ATTCTCTCACTGGCTCTGGCTGGCCGGACCATTTATGACTACCAACTTAC
GCGACTGTCAGAAGAGGACAAGCAAGCCGTAGTGGAAGCGTTGGCGAGCC
TGGGCAAGACCATCGTCACGACCGGACCCGACAGACGCCGTTATTAA

Synonyms

Publications