NO29G01610, NO29G01610 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO29G01610 vs. NCBI_GenBank
Match: EWM21340.1 (endonuclease [Nannochloropsis gaditana]) HSP 1 Score: 331.6 bits (849), Expect = 4.400e-87 Identity = 206/413 (49.88%), Postives = 224/413 (54.24%), Query Frame = 0 Query: 63 WRPEEAREAQTMLPQPQYDGDWEIQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVWEAEGHLRRLRPHASLNLFAAASSINDYGIHKESHPHTGMTAXXXXXXXXXXXXIVRRRLGQPNLRCPALVLNQDLTPLTLFPLTIAPWWSAIRSTLRGRVSVLESYDRRVRSTHALHQLPSVVALTRLQTPSYSHKHYDDAPAASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGWSGVEGAAGVGEDXXXXXXXXXXXXXXXXXXXXXXXXXXXRPFRRNVALRDGYRCCFCGCRLSYRTLTLDHVVPKCLGGEDSWENLASACMRCNSRKGSLRVEELGKINMRLLQAPYAPTALQLAYAYVDLLPAAILTQWGRYLEGPLAREAAKFRAFHAAFSL 476 W +E REA MLPQPQY+GDWEIQA V+ R A+ + AAS + +KES+ R + Q RCPALVLNQDLTPLTLFPLTIAPWWSA+RSTLRGRVSVL SYDR VRSTHALHQLPSVVALTR QTP + G +G + G GE RPFRRNVALRDGY CCFCG RLSYRTLTLDHVVP+CLGGEDSWENLASAC +CNSRKGSL V ELG+I+MRLL+ PYAPTALQLAYAYVDLLPAAIL QWGRYLEGPLAREAAK A HA FSL Sbjct: 79 WSNDEPREA--MLPQPQYEGDWEIQA-----EEEDQQERIGAKDREGEDEGEEGGVFGGGQTPHRPGAFATDHATPAASRRSGADSYKESYQDEYWE---------------RPGIVQATSRCPALVLNQDLTPLTLFPLTIAPWWSAVRSTLRGRVSVLSSYDRGVRSTHALHQLPSVVALTRQQTPGQRRQ-----------------------------------------------AGALEGREGEAGCKAGGGRGE--------------GDGERRFWPAARTPRPFRRNVALRDGYVCCFCGRRLSYRTLTLDHVVPRCLGGEDSWENLASACRQCNSRKGSLLVSELGRIDMRLLRVPYAPTALQLAYAYVDLLPAAILNQWGRYLEGPLAREAAKVSALHATFSL 408
BLAST of NO29G01610 vs. NCBI_GenBank
Match: EJK48710.1 (hypothetical protein THAOC_32472 [Thalassiosira oceanica]) HSP 1 Score: 99.0 bits (245), Expect = 4.800e-17 Identity = 45/101 (44.55%), Postives = 60/101 (59.41%), Query Frame = 0 Query: 355 RRNVALRDGYRCCFCGCRLSYRTLTLDHVVPKCLGGEDSWENLASACMRCNSRKGSLRVEELGKINMRLLQAPYAPTALQLAYAYVDLLPAAILTQWGRYL 456 RRNV LRDGYRC +CG L+LDHV P+CLGG+ +WEN + C +CN RKGSLR +L + M+LL P P+ +L +P + W +L Sbjct: 276 RRNVFLRDGYRCQYCGQLFRTSDLSLDHVQPRCLGGKLNWENAVTCCKKCNGRKGSLRPNQLHTVGMKLLSTPRCPSQFELLSEASKFVPRRVHPTWAPFL 376
BLAST of NO29G01610 vs. NCBI_GenBank
Match: WP_054109141.1 (HNH endonuclease [Novosphingobium sp. AAP83] >KPF89464.1 MFS transporter [Novosphingobium sp. AAP83]) HSP 1 Score: 98.6 bits (244), Expect = 6.300e-17 Identity = 73/251 (29.08%), Postives = 99/251 (39.44%), Query Frame = 0 Query: 185 CPALVLNQDLTPLTLFPLTIAPWWSAIRSTLRGRVSVLESYDRRVRSTHALHQLPSVVALTRLQTPSYSHKHYDDAPAASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGWSGVEGAAGVGEDXXXXXXXXXXXXXXXXXXXXXXXXXXXRPFRRNVALRDGYRCCFCGCRLSYRTLTLDHVVPKCLGGEDSWENLASACMRCNSRKGSLRVEELGKINMRLLQAPYAPTALQL 436 CPALVLN D TPL+ +PL++ PW +AI++ RV ++E+YDR V S +LPSV+AL + PS + PA + R N+ LRDG++C +CGC LT DH+VP+ LGG SWEN+A+AC CN RKG E+ M+L+ PT QL Sbjct: 11 CPALVLNADYTPLSYYPLSLWPWQTAIKAVFLERVDIIETYDREVHSASFGMKLPSVIALRQYVRPS-------EYPAFT------------------------------------------------------------------------------------------RFNLFLRDGFQCQYCGCP---DNLTFDHIVPRRLGGRTSWENVAAACSPCNLRKGGRTPEQ---ARMKLMNRAIRPTTWQL 158
BLAST of NO29G01610 vs. NCBI_GenBank
Match: OYX63057.1 (HNH endonuclease [Novosphingobium sp. 32-60-15]) HSP 1 Score: 98.6 bits (244), Expect = 6.300e-17 Identity = 73/251 (29.08%), Postives = 99/251 (39.44%), Query Frame = 0 Query: 185 CPALVLNQDLTPLTLFPLTIAPWWSAIRSTLRGRVSVLESYDRRVRSTHALHQLPSVVALTRLQTPSYSHKHYDDAPAASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGWSGVEGAAGVGEDXXXXXXXXXXXXXXXXXXXXXXXXXXXRPFRRNVALRDGYRCCFCGCRLSYRTLTLDHVVPKCLGGEDSWENLASACMRCNSRKGSLRVEELGKINMRLLQAPYAPTALQL 436 CPALVLN D TPL+ +PL++ PW +AI++ RV ++E+YDR V S +LPSV+AL + PS + PA + R N+ LRDG++C +CGC LT DH+VP+ LGG SWEN+A+AC CN RKG E+ M+L+ PT QL Sbjct: 10 CPALVLNADYTPLSYYPLSLWPWQTAIKAVFLERVDIIETYDREVHSASFGMKLPSVIALRQYVRPS-------EYPAFT------------------------------------------------------------------------------------------RFNLFLRDGFQCQYCGCP---DNLTFDHIVPRRLGGRTSWENVAAACSPCNLRKGGRTPEQ---ARMKLMNRAIRPTTWQL 157
BLAST of NO29G01610 vs. NCBI_GenBank
Match: EWM28559.1 (hnh endonuclease [Nannochloropsis gaditana]) HSP 1 Score: 96.7 bits (239), Expect = 2.400e-16 Identity = 81/285 (28.42%), Postives = 104/285 (36.49%), Query Frame = 0 Query: 177 RLGQPNLRCPALVLNQDLTPLTLFPLTIAPWWSAIRSTLRGRVSVLESYDRRVRSTHALHQLPSVVALTRLQTPSYSHKHYDDAPAASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGWSGVEGAAGVGEDXXXXXXXXXXXXXXXXXXXXXXXXXXXRPFRRNVALRDGYRCCFCGCRLSYRTLTLDHVVPKCLGGEDSWENLASACMRCNSRKGSLRVEELGKINMRLLQAPYAPTALQL---AYAYVDLLPAAILTQWGRYLEGP 459 RL + + P LVLN D PL+ PL+I W AI++ RV+VL YD ++ST QLPSVV L + Q K + P RRN+ +RD Y C +C RLS LTLDHV+P+ GG+ SW+NL + C +CN RKG V+EL +I M LL P P +L A Y W YL GP Sbjct: 263 RLLRQTGKYPVLVLNTDAQPLSYLPLSIIRWQEAIKAIFLERVTVLAYYDSYIQSTAGPWQLPSVVCLKQYQ------KGCRERPPPLN-----------------------------------------------------------------------------------------RRNIYIRDRYSCAYCSQRLSAHDLTLDHVMPRSKGGKGSWDNLVTCCRQCNRRKGKRTVKELKEIGMVLLNPPRKPKMSELQRQARLYRTAAGVFPHESWETYLGGP 452
BLAST of NO29G01610 vs. NCBI_GenBank
Match: OYW50136.1 (HNH endonuclease [Novosphingobium sp. 12-62-10] >OYZ11760.1 HNH endonuclease [Novosphingobium sp. 28-62-57] >OZA31702.1 HNH endonuclease [Novosphingobium sp. 17-62-9]) HSP 1 Score: 96.7 bits (239), Expect = 2.400e-16 Identity = 72/251 (28.69%), Postives = 99/251 (39.44%), Query Frame = 0 Query: 185 CPALVLNQDLTPLTLFPLTIAPWWSAIRSTLRGRVSVLESYDRRVRSTHALHQLPSVVALTRLQTPSYSHKHYDDAPAASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGWSGVEGAAGVGEDXXXXXXXXXXXXXXXXXXXXXXXXXXXRPFRRNVALRDGYRCCFCGCRLSYRTLTLDHVVPKCLGGEDSWENLASACMRCNSRKGSLRVEELGKINMRLLQAPYAPTALQL 436 CPALVLN D TPL+ +PL++ PW +AI++ RV ++E+YDR V S +LPSV+AL + PS + PA + R N+ LRDG++C +CG + LT DH+VP+ LGG SWEN+A+AC CN +KG E+ MRL+ PT QL Sbjct: 10 CPALVLNADYTPLSYYPLSLWPWQTAIKAVFLERVDIIETYDREVHSASFGMKLPSVIALRQYVRPS-------EYPAFT------------------------------------------------------------------------------------------RFNLFLRDGFQCQYCG---TNENLTFDHIVPRRLGGRTSWENVAAACAPCNLKKGGRTPEQ---ARMRLMNRAIRPTTWQL 157
BLAST of NO29G01610 vs. NCBI_GenBank
Match: OYZ27070.1 (HNH endonuclease [Novosphingobium sp. 16-62-11]) HSP 1 Score: 96.7 bits (239), Expect = 2.400e-16 Identity = 72/251 (28.69%), Postives = 99/251 (39.44%), Query Frame = 0 Query: 185 CPALVLNQDLTPLTLFPLTIAPWWSAIRSTLRGRVSVLESYDRRVRSTHALHQLPSVVALTRLQTPSYSHKHYDDAPAASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGWSGVEGAAGVGEDXXXXXXXXXXXXXXXXXXXXXXXXXXXRPFRRNVALRDGYRCCFCGCRLSYRTLTLDHVVPKCLGGEDSWENLASACMRCNSRKGSLRVEELGKINMRLLQAPYAPTALQL 436 CPALVLN D TPL+ +PL++ PW +AI++ RV ++E+YDR V S +LPSV+AL + PS + PA + R N+ LRDG++C +CG + LT DH+VP+ LGG SWEN+A+AC CN +KG E+ MRL+ PT QL Sbjct: 11 CPALVLNADYTPLSYYPLSLWPWQTAIKAVFLERVDIIETYDREVHSASFGMKLPSVIALRQYVRPS-------EYPAFT------------------------------------------------------------------------------------------RFNLFLRDGFQCQYCG---TNENLTFDHIVPRRLGGRTSWENVAAACAPCNLKKGGRTPEQ---ARMRLMNRAIRPTTWQL 158
BLAST of NO29G01610 vs. NCBI_GenBank
Match: WP_046349151.1 (HNH endonuclease [Sphingomonas changbaiensis] >GAO40354.1 putative endonuclease [Sphingomonas changbaiensis NBRC 104936]) HSP 1 Score: 96.3 bits (238), Expect = 3.100e-16 Identity = 71/251 (28.29%), Postives = 99/251 (39.44%), Query Frame = 0 Query: 185 CPALVLNQDLTPLTLFPLTIAPWWSAIRSTLRGRVSVLESYDRRVRSTHALHQLPSVVALTRLQTPSYSHKHYDDAPAASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGWSGVEGAAGVGEDXXXXXXXXXXXXXXXXXXXXXXXXXXXRPFRRNVALRDGYRCCFCGCRLSYRTLTLDHVVPKCLGGEDSWENLASACMRCNSRKGSLRVEELGKINMRLLQAPYAPTALQL 436 CPALVLN D TPL+ +PL++ PW +AI++ RV ++ESY++ VRS + +LPSV+AL + PS PA + R N+ LRD + C +CG + R LT DHVVP+ GG +WEN+++AC CN +KG E +M L + PY PT QL Sbjct: 13 CPALVLNADYTPLSYYPLSLWPWQTAIKAVFLDRVDIIESYEKEVRSPTSAMKLPSVIALKQYVRPS-------QHPAFT------------------------------------------------------------------------------------------RFNLFLRDRFSCQYCG---TSRDLTFDHVVPRAYGGRTTWENVSTACAPCNLKKGGRTPTE---AHMALFEQPYRPTTWQL 160
BLAST of NO29G01610 vs. NCBI_GenBank
Match: XP_005718133.1 (unnamed protein product [Chondrus crispus] >CDF38248.1 unnamed protein product [Chondrus crispus]) HSP 1 Score: 95.9 bits (237), Expect = 4.100e-16 Identity = 75/272 (27.57%), Postives = 108/272 (39.71%), Query Frame = 0 Query: 185 CPALVLNQDLTPLTLFPLTIAPWWSAIRSTLRGRVSVLESYDRRVRSTHALHQLPSVVALTRLQTPSYSHKHYDDAPAASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGWSGVEGAAGVGEDXXXXXXXXXXXXXXXXXXXXXXXXXXXRPFRRNVALRDGYRCCFCGCRLSYRTLTLDHVVPKCLGGEDSWENLASACMRCNSRKGSLRVEELGKINMRLLQAPYAPTALQLAYAYVDLLPAAILTQ-WGRYL 456 CPALVLN D +PL+ PL++ PW AI++ RV+V+ +YD VRS + LPSV++L + Q + PA S R NV +RD + C +CG R + LT DHV+P+C GG+ +W+N+ +AC+ CN KG + EL +M+LL+ P+ PT QL A L P L + W Y+ Sbjct: 94 CPALVLNADFSPLSYMPLSLWPWQDAIKAVFLDRVTVVATYDIGVRSPGMIFPLPSVISLKQYQPRARKR------PAFS------------------------------------------------------------------------------------------RFNVFMRDAFSCQYCGRRFPTQELTFDHVIPRCAGGKTNWQNVVTACIGCNHSKGRYLLHELK--HMKLLRMPHEPTNGQL-QARARLFPPRYLHESWRDYV 266
BLAST of NO29G01610 vs. NCBI_GenBank
Match: WP_023839641.1 (MULTISPECIES: HNH endonuclease [Proteobacteria] >ESZ85484.1 endonuclease [Blastomonas sp. CACIA14H2]) HSP 1 Score: 95.5 bits (236), Expect = 5.300e-16 Identity = 77/279 (27.60%), Postives = 108/279 (38.71%), Query Frame = 0 Query: 185 CPALVLNQDLTPLTLFPLTIAPWWSAIRSTLRGRVSVLESYDRRVRSTHALHQLPSVVALTRLQTPSYSHKHYDDAPAASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGWSGVEGAAGVGEDXXXXXXXXXXXXXXXXXXXXXXXXXXXRPFRRNVALRDGYRCCFCGCRLSYRTLTLDHVVPKCLGGEDSWENLASACMRCNSRKGSLRVEELGKINMRLLQAPYAPTALQLAYAYVDLLPAAILTQWGRYLEGPLAREA 464 CPALVLN D TPL+ +PL++ PW +AI++ RV V+E+Y+R V S ++PSV+AL + PS + PA + R N+ LRD + C +CG S LT DHVVP+ LGG+ +W+N+A+AC CN RKG + NMRL+ P PT+ QL P + W +L + EA Sbjct: 25 CPALVLNADYTPLSYYPLSLWPWQTAIKAIFLDRVDVIETYEREVHSPTIQMKIPSVIALKQYVKPS-------EYPAFT------------------------------------------------------------------------------------------RFNLFLRDRFHCQYCG---SPHNLTFDHVVPRRLGGKTTWQNVATACAPCNMRKGG---RTPAQANMRLMVQPIRPTSWQLQERGRAFPPNYLHESWHDWLYWDVELEA 200 The following BLAST results are available for this feature:
BLAST of NO29G01610 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20 Position : 0 Zoom : x 1
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO29G01610 ID=NO29G01610|Name=NO29G01610|organism=Nannochloropsis oceanica|type=gene|length=3650bpback to top protein sequence of NO29G01610.1 >NO29G01610.1-protein ID=NO29G01610.1-protein|Name=NO29G01610.1|organism=Nannochloropsis oceanica|type=polypeptide|length=539bpback to top Synonyms
Publications
|