NO29G01600, NO29G01600 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO29G01600 vs. NCBI_GenBank
Match: EWM21345.1 (hypothetical protein Naga_100075g19 [Nannochloropsis gaditana]) HSP 1 Score: 316.2 bits (809), Expect = 6.100e-83 Identity = 157/169 (92.90%), Postives = 163/169 (96.45%), Query Frame = 0 Query: 1 MATRKLNRLATQVAKLTSPLPPAYKPWGYTFAFDMMVKLAGTARIWVEEMSDQRAVVHLKNRRRVQNHIGGIHACGMALAAESATGIVVGMNVPDSALPLCKSMKVNFVRRCEGDIKAEAHLTEEQLTKIHTEEKGDVLVAVQVTDSSGKSPITAEMVWAWVPKVRKEK 170 M RKLNRLATQVAKLTSPLP AYKPWGYT AFDMMVKLAGTAR+WVEEMSD+RAVVHLKNRRRVQNHIGGIHACGMALAAESATGIVVGMNVPDSALPLCKSMKVNFVRRCEGDIKA AHLTEEQLTKI++EEKGDVLVAV+VTDSSGKSPITAEMVWAWVPK+RK K Sbjct: 1 MTCRKLNRLATQVAKLTSPLPAAYKPWGYTLAFDMMVKLAGTARLWVEEMSDKRAVVHLKNRRRVQNHIGGIHACGMALAAESATGIVVGMNVPDSALPLCKSMKVNFVRRCEGDIKAVAHLTEEQLTKINSEEKGDVLVAVEVTDSSGKSPITAEMVWAWVPKLRKGK 169
BLAST of NO29G01600 vs. NCBI_GenBank
Match: EJK62712.1 (hypothetical protein THAOC_16666 [Thalassiosira oceanica]) HSP 1 Score: 201.8 bits (512), Expect = 1.700e-48 Identity = 98/167 (58.68%), Postives = 128/167 (76.65%), Query Frame = 0 Query: 3 TRKLNRLATQVAKLTSPLPPAYKPWGYTFAFDMMVKLAGTARIWVEEMSDQRAVVHLKNRRRVQNHIGGIHACGMALAAESATGIVVGMNVPDSALPLCKSMKVNFVRRCEGDIKAEAHLTEEQLTKIHTEEKGDVLVAVQVTDSSGKSPITAEMVWAWVPKVRKEK 170 T KLN++A+ + ++ S LP + P+ +F F+ MVKLAGTA I ++E+S ++A + L N RRVQNHIGG+HAC MALAAESATGI++GMNVPD+ LPL K+MKV+FVRRC+GDI+AEA L++E +IH E+KG+V V V D SG PI AEM+WAWV K RK K Sbjct: 2 TYKLNKMASTIQRIQSTLPESMHPFANSFLFNNMVKLAGTAGIRIDELSHKKATISLANARRVQNHIGGLHACSMALAAESATGILIGMNVPDTHLPLIKTMKVDFVRRCKGDIRAEATLSDEDYRRIHEEDKGEVWVPCTVVDESGNEPIKAEMLWAWVAKRRKSK 168
BLAST of NO29G01600 vs. NCBI_GenBank
Match: CBJ31287.1 (conserved unknown protein [Ectocarpus siliculosus] >CBJ27405.1 conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 177.6 bits (449), Expect = 3.400e-41 Identity = 88/136 (64.71%), Postives = 105/136 (77.21%), Query Frame = 0 Query: 33 FDMMVKLAGTARIWVEEMSDQRAVVHLKNRRRVQNHIGGIHACGMALAAESATGIVVGMNVPDSALPLCKSMKVNFVRRCEGDIKAEAHLTEEQLTKIHTEEKGDVLVAVQVTDSSGKSPITAEMVWAWVPKVRKE 169 F VKLAGTA + VEE++ R+VV + N RRVQNHIG +HACGMALAAESATGI+VGM+VPDS LPLCKSM ++F R +GD+ A A L+EEQLT + +EKG+ V V VTD SGK PI AE VWAWVPK RK+ Sbjct: 44 FAFQVKLAGTAGVRVEELTPHRSVVKVANVRRVQNHIGSVHACGMALAAESATGILVGMSVPDSRLPLCKSMAIDFTRLSQGDVTAVAELSEEQLTAVRDQEKGEANVQVTVTDESGKEPIRAEFVWAWVPKRRKK 179
BLAST of NO29G01600 vs. NCBI_GenBank
Match: OQX35543.1 (DUF4442 domain-containing protein [Oceanospirillales bacterium LUC14_002_19_P2]) HSP 1 Score: 175.3 bits (443), Expect = 1.700e-40 Identity = 85/160 (53.12%), Postives = 111/160 (69.38%), Query Frame = 0 Query: 7 NRLATQVAKLTSPLPPAYKPWGYTFAFDMMVKLAGTARIWVEEMSDQRAVVHLKNRRRVQNHIGGIHACGMALAAESATGIVVGMNVPDSALPLCKSMKVNFVRRCEGDIKAEAHLTEEQLTKIHTEEKGDVLVAVQVTDSSGKSPITAEMVWAWVPKVR 167 NRL+ VAK T PP + W T F +K AGTA++ + +S Q + + +KNR+RVQNHIG +HAC MAL AESATG +VGMNVPD +P+ KSM +++V+R GD+ A AHLT+EQ+ +I T EKG+V VAV +TD G PI AEM+W W PK R Sbjct: 6 NRLSRIVAK-TQKAPPFMQSWLLTKVFGTAIKFAGTAKVDIHHLSHQESRLTIKNRKRVQNHIGSVHACAMALLAESATGYIVGMNVPDDRVPVIKSMHIDYVKRATGDLHAVAHLTDEQIQQIQTTEKGEVTVAVTITDEKGVEPIKAEMIWTWTPKRR 164
BLAST of NO29G01600 vs. NCBI_GenBank
Match: WP_020405245.1 (DUF4442 domain-containing protein [Hahella ganghwensis]) HSP 1 Score: 172.6 bits (436), Expect = 1.100e-39 Identity = 86/162 (53.09%), Postives = 115/162 (70.99%), Query Frame = 0 Query: 5 KLNRLATQVAKLTSPLPPAYKPWGYTFAFDMMVKLAGTARIWVEEMSDQRAVVHLKNRRRVQNHIGGIHACGMALAAESATGIVVGMNVPDSALPLCKSMKVNFVRRCEGDIKAEAHLTEEQLTKIHTEEKGDVLVAVQVTDSSGKSPITAEMVWAWVPKVR 167 +LNR+ +++ + LP + T F VK GTA VEE+SDQR VV LKNR+RVQNHIG +HA AL AE+ATG VVGMN+PDS++P+ K+MK+++V+R GD++AEA LTEEQ+ I T+EKG++ VAV +TD+ K P+ AEMVWAW P R Sbjct: 3 QLNRIVSKI----NLLPRFARSRALTTFFGKTVKFVGTANATVEELSDQRCVVTLKNRKRVQNHIGSVHAVANALIAETATGFVVGMNIPDSSVPVIKTMKLDYVKRSTGDMRAEARLTEEQVEAIRTQEKGEITVAVSITDAENKEPVLAEMVWAWTPNRR 160
BLAST of NO29G01600 vs. NCBI_GenBank
Match: WP_011394570.1 (DUF4442 domain-containing protein [Hahella chejuensis] >ABC27493.1 conserved hypothetical protein [Hahella chejuensis KCTC 2396]) HSP 1 Score: 171.4 bits (433), Expect = 2.400e-39 Identity = 86/161 (53.42%), Postives = 116/161 (72.05%), Query Frame = 0 Query: 6 LNRLATQVAKLTSPLPPAYKPWGYTFAFDMMVKLAGTARIWVEEMSDQRAVVHLKNRRRVQNHIGGIHACGMALAAESATGIVVGMNVPDSALPLCKSMKVNFVRRCEGDIKAEAHLTEEQLTKIHTEEKGDVLVAVQVTDSSGKSPITAEMVWAWVPKVR 167 +N+L + V+K+ + LP + T F +VK AGT I VEE++ R ++ LKNRR V+NHIG +HA AL AESATG +VGMNVPD A+P+ K+MK+++V+R +GD++AEAHLTEEQ+ I T EKG+V VAV +TDS K P+ AEM+WAW PK R Sbjct: 1 MNKLMSIVSKI-NLLPEIARSRALTLFFGKVVKYAGTTGIVVEELTGHRCIITLKNRRAVRNHIGSVHAVANALIAESATGFLVGMNVPDHAVPVIKTMKLDYVKRAKGDMRAEAHLTEEQIHAIQTLEKGEVTVAVAITDSEDKEPVMAEMIWAWTPKRR 160
BLAST of NO29G01600 vs. NCBI_GenBank
Match: WP_094705608.1 (DUF4442 domain-containing protein [Hahella sp. CCB-MM4] >OZG75117.1 DUF4442 domain-containing protein [Hahella sp. CCB-MM4]) HSP 1 Score: 171.4 bits (433), Expect = 2.400e-39 Identity = 85/161 (52.80%), Postives = 115/161 (71.43%), Query Frame = 0 Query: 6 LNRLATQVAKLTSPLPPAYKPWGYTFAFDMMVKLAGTARIWVEEMSDQRAVVHLKNRRRVQNHIGGIHACGMALAAESATGIVVGMNVPDSALPLCKSMKVNFVRRCEGDIKAEAHLTEEQLTKIHTEEKGDVLVAVQVTDSSGKSPITAEMVWAWVPKVR 167 +N+L V+K+ + LP + T F VK GTA VEE+SD R VV LKNR+R+QNHIG +HA AL AE+ATG +VGMNVPDS++P+ K+MK+++V+R GD++AEA LT+EQ+ I T+EKG+V V V +TD+ GK P+ AEM+WAW PK R Sbjct: 1 MNQLNKIVSKI-NLLPEVARSRALTLFFGKTVKFVGTAGAKVEELSDSRCVVTLKNRKRIQNHIGSVHAVANALIAETATGFIVGMNVPDSSVPVIKTMKLDYVKRTAGDMRAEACLTDEQINAIQTQEKGEVAVPVTITDAEGKEPVVAEMIWAWTPKRR 160
BLAST of NO29G01600 vs. NCBI_GenBank
Match: OQR80918.1 (hypothetical protein ACHHYP_17064 [Achlya hypogyna]) HSP 1 Score: 170.2 bits (430), Expect = 5.400e-39 Identity = 90/160 (56.25%), Postives = 116/160 (72.50%), Query Frame = 0 Query: 6 LNRLATQVAKLT-SPLPPAYKPWGYTFAFDMMVKLAGTARIWVEEMSDQRAVVHLKNRRRVQNHIGGIHACGMALAAESATGIVVGMNVPDSALPLCKSMKVNFVRRCEGDIKAEAHLTEEQLTKIHTEEKGDVLVAVQVTDSSGKSPITAEMVWAWVPK 165 +N+L VAK+ S LP + + AF+ VK+AG A I VE +++Q++VV LKN RVQNHIGG+HACGMAL AESA+G+V GMNV DS LPL KSM +N+V+R +GD+KA A LT+ Q +I E+KG+VLV V VTDS+G SP+ EM W WVPK Sbjct: 5 VNKLGKIVAKINGSGLPSFLRESALSTAFNAQVKMAGVAGIHVESLTEQQSVVSLKNTFRVQNHIGGVHACGMALLAESASGMVFGMNVRDSHLPLLKSMSMNYVKRAKGDLKAIATLTDAQRNEIAKEDKGEVLVNVVVTDSAGDSPVECEMRWVWVPK 164
BLAST of NO29G01600 vs. NCBI_GenBank
Match: XP_009839692.1 (hypothetical protein H257_13746 [Aphanomyces astaci] >ETV71029.1 hypothetical protein H257_13746 [Aphanomyces astaci]) HSP 1 Score: 169.5 bits (428), Expect = 9.200e-39 Identity = 84/164 (51.22%), Postives = 115/164 (70.12%), Query Frame = 0 Query: 7 NRLATQVAKLT-SPLPPAYKPWGYTFAFDMMVKLAGTARIWVEEMSDQRAVVHLKNRRRVQNHIGGIHACGMALAAESATGIVVGMNVPDSALPLCKSMKVNFVRRCEGDIKAEAHLTEEQLTKIHTEEKGDVLVAVQVTDSSGKSPITAEMVWAWVPKVRKEK 170 N+LA VAK+ S LP + + AF+ VK+AG A I +E +++ ++V+HLKNR RVQNHIGG+HACGMAL AESA+G+V G+NV D+ LPL KSM +N+V+R GD+KA A LT EQ I ++KG+++V V +TD G+ P+ +M WAW PK R K Sbjct: 5 NKLAGLVAKINQSGLPSFLRESALSLAFNSQVKMAGVAGIHIESLTESQSVLHLKNRFRVQNHIGGVHACGMALLAESASGVVFGVNVKDTHLPLLKSMSINYVKRAHGDLKAVATLTPEQREAIQRDDKGNLVVDVVLTDEKGEQPVECQMTWAWTPKKRSTK 168
BLAST of NO29G01600 vs. NCBI_GenBank
Match: XP_008605323.1 (hypothetical protein SDRG_01568 [Saprolegnia diclina VS20] >EQC41609.1 hypothetical protein SDRG_01568 [Saprolegnia diclina VS20]) HSP 1 Score: 169.1 bits (427), Expect = 1.200e-38 Identity = 88/160 (55.00%), Postives = 116/160 (72.50%), Query Frame = 0 Query: 6 LNRLATQVAKLTSPLPPAY-KPWGYTFAFDMMVKLAGTARIWVEEMSDQRAVVHLKNRRRVQNHIGGIHACGMALAAESATGIVVGMNVPDSALPLCKSMKVNFVRRCEGDIKAEAHLTEEQLTKIHTEEKGDVLVAVQVTDSSGKSPITAEMVWAWVPK 165 +N+L VAK+ S PA+ + + AF+ VK+AG A I VE +++Q++VV LKN RVQNHIGG+HACGMAL AESA+G+V GMNV DS LPL KSM +++V+R +GD+KA A LT+ Q +I +KG+VLV V VTDS+G SP+ EM W WVPK Sbjct: 5 VNKLGKLVAKINSSSAPAFLREGALSTAFNAQVKMAGVAGIHVETLTEQKSVVSLKNSFRVQNHIGGVHACGMALLAESASGMVFGMNVRDSHLPLLKSMSMSYVKRAKGDLKAVATLTDAQRDEIAKSDKGEVLVNVVVTDSAGDSPVECEMRWVWVPK 164 The following BLAST results are available for this feature:
BLAST of NO29G01600 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO29G01600 ID=NO29G01600|Name=NO29G01600|organism=Nannochloropsis oceanica|type=gene|length=1463bpback to top protein sequence of NO29G01600.1 >NO29G01600.1-protein ID=NO29G01600.1-protein|Name=NO29G01600.1|organism=Nannochloropsis oceanica|type=polypeptide|length=171bpback to top Synonyms
Publications
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