NO29G01410, NO29G01410 (gene) Nannochloropsis oceanica

Overview
NameNO29G01410
Unique NameNO29G01410
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length769
Alignment locationchr29:451205..451973 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr29genomechr29:451205..451973 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO29G01410 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL062nonsL062Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL061nonsL061Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR038ncniR038Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR081ngnoR081Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR079ngnoR079Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO29G01410.1NO29G01410.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO29G01410.1NO29G01410.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO29G01410 ID=NO29G01410|Name=NO29G01410|organism=Nannochloropsis oceanica|type=gene|length=769bp
ATGGGGGCGGGCGTTGGCGAGGCGGTGGGGGCAAGTGTCGGGGCAGCCGA
TGATGCCACTGTTGGGGAAGCCGTGGGGAAGGAAGTCGGGGCACCAGTGG
GAGCGGCTGTTGGAAAGGCGGTAGGAGCAGCTGTGGGGGCAGCCgtaggt
acaggggttggagcgcaagcagtaccacgacagcgaggagtgcgaggcgg
agacgggcatccacctgaaggcgaaatcccgcaccttcgtatttataaag
TTGGTGGGTCTGGACAAGGATGTGGTGAGGGATATGGCGGGAATCAAGTC
TCAGCATTGCTTTGTGACGTGCGGTGGGTACGTTTTGATGTTTCCTACGT
CCTGCACGTGCCAGCCTTGCAGGAACATGGAATATGATGAATGCGAGCTG
GTGACGTCGGGGGAGCGGGGAGGTGGGAAACGAATAGACCTGCAGACATT
CGTTCCTGCTATTCAGGAGGAGCGCACCACCTTTGGCTCCACCTTCGAGC
GGGGGTGGGCTGTGATGGCCAAATGCAAGGTGGACGATTGGGTGCTGATG
CGTGCGGACGTGGACCTACGCAAAGCATATTCGAAGACAAGCCCAAGAAC
TGGACATGTCGTAGTAGTTTCCGGCTGGCTCAAATCGCGGAGTTGCCAAA
GCAGCGCGCTACGGGAGAGAGGCTGTCGTCAACGGCGAGGAGGAGCGAGG
GGAATTTCCTTGTCTATTATGCGCAAGAGCACAAGCAAGAGGAACAGTGG
CTCTTCAAGTCAGCTCTAA
back to top

protein sequence of NO29G01410.1

>NO29G01410.1-protein ID=NO29G01410.1-protein|Name=NO29G01410.1|organism=Nannochloropsis oceanica|type=polypeptide|length=221bp
MGAGVGEAVGASVGAADDATVGEAVGKEVGAPVGAAVGKAVGAAVGAALV
GLDKDVVRDMAGIKSQHCFVTCGGYVLMFPTSCTCQPCRNMEYDECELVT
SGERGGGKRIDLQTFVPAIQEERTTFGSTFERGWAVMAKCKVDDWVLMRA
DVDLRKAYSKTSPRTGHVVVVSGWLKSRSCQSSALRERGCRQRRGGARGI
SLSIMRKSTSKRNSGSSSQL*
back to top
Synonyms
Publications