NO29G01410.1, NO29G01410.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO29G01410.1
Unique NameNO29G01410.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length663
Alignment locationchr29:451205..451973 +

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr29genomechr29:451205..451973 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO29G01410.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO29G01410NO29G01410Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO29G01410.1NO29G01410.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO29G01410.1.cds1NO29G01410.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO29G01410.1.cds2NO29G01410.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO29G01410.1 ID=NO29G01410.1|Name=NO29G01410.1|organism=Nannochloropsis oceanica|type=mRNA|length=663bp
ATGGGGGCGGGCGTTGGCGAGGCGGTGGGGGCAAGTGTCGGGGCAGCCGA
TGATGCCACTGTTGGGGAAGCCGTGGGGAAGGAAGTCGGGGCACCAGTGG
GAGCGGCTGTTGGAAAGGCGGTAGGAGCAGCTGTGGGGGCAGCCTTGGTG
GGTCTGGACAAGGATGTGGTGAGGGATATGGCGGGAATCAAGTCTCAGCA
TTGCTTTGTGACGTGCGGTGGGTACGTTTTGATGTTTCCTACGTCCTGCA
CGTGCCAGCCTTGCAGGAACATGGAATATGATGAATGCGAGCTGGTGACG
TCGGGGGAGCGGGGAGGTGGGAAACGAATAGACCTGCAGACATTCGTTCC
TGCTATTCAGGAGGAGCGCACCACCTTTGGCTCCACCTTCGAGCGGGGGT
GGGCTGTGATGGCCAAATGCAAGGTGGACGATTGGGTGCTGATGCGTGCG
GACGTGGACCTACGCAAAGCATATTCGAAGACAAGCCCAAGAACTGGACA
TGTCGTAGTAGTTTCCGGCTGGCTCAAATCGCGGAGTTGCCAAAGCAGCG
CGCTACGGGAGAGAGGCTGTCGTCAACGGCGAGGAGGAGCGAGGGGAATT
TCCTTGTCTATTATGCGCAAGAGCACAAGCAAGAGGAACAGTGGCTCTTC
AAGTCAGCTCTAA
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protein sequence of NO29G01410.1

>NO29G01410.1-protein ID=NO29G01410.1-protein|Name=NO29G01410.1|organism=Nannochloropsis oceanica|type=polypeptide|length=221bp
MGAGVGEAVGASVGAADDATVGEAVGKEVGAPVGAAVGKAVGAAVGAALV
GLDKDVVRDMAGIKSQHCFVTCGGYVLMFPTSCTCQPCRNMEYDECELVT
SGERGGGKRIDLQTFVPAIQEERTTFGSTFERGWAVMAKCKVDDWVLMRA
DVDLRKAYSKTSPRTGHVVVVSGWLKSRSCQSSALRERGCRQRRGGARGI
SLSIMRKSTSKRNSGSSSQL*
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mRNA from alignment at chr29:451205..451973+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO29G01410.1 ID=NO29G01410.1|Name=NO29G01410.1|organism=Nannochloropsis oceanica|type=mRNA|length=769bp|location=Sequence derived from alignment at chr29:451205..451973+ (Nannochloropsis oceanica)
ATGGGGGCGGGCGTTGGCGAGGCGGTGGGGGCAAGTGTCGGGGCAGCCGA
TGATGCCACTGTTGGGGAAGCCGTGGGGAAGGAAGTCGGGGCACCAGTGG
GAGCGGCTGTTGGAAAGGCGGTAGGAGCAGCTGTGGGGGCAGCCGTAGGT
ACAGGGGTTGGAGCGCAAGCAGTACCACGACAGCGAGGAGTGCGAGGCGG
AGACGGGCATCCACCTGAAGGCGAAATCCCGCACCTTCGTATTTATAAAG
TTGGTGGGTCTGGACAAGGATGTGGTGAGGGATATGGCGGGAATCAAGTC
TCAGCATTGCTTTGTGACGTGCGGTGGGTACGTTTTGATGTTTCCTACGT
CCTGCACGTGCCAGCCTTGCAGGAACATGGAATATGATGAATGCGAGCTG
GTGACGTCGGGGGAGCGGGGAGGTGGGAAACGAATAGACCTGCAGACATT
CGTTCCTGCTATTCAGGAGGAGCGCACCACCTTTGGCTCCACCTTCGAGC
GGGGGTGGGCTGTGATGGCCAAATGCAAGGTGGACGATTGGGTGCTGATG
CGTGCGGACGTGGACCTACGCAAAGCATATTCGAAGACAAGCCCAAGAAC
TGGACATGTCGTAGTAGTTTCCGGCTGGCTCAAATCGCGGAGTTGCCAAA
GCAGCGCGCTACGGGAGAGAGGCTGTCGTCAACGGCGAGGAGGAGCGAGG
GGAATTTCCTTGTCTATTATGCGCAAGAGCACAAGCAAGAGGAACAGTGG
CTCTTCAAGTCAGCTCTAA
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Coding sequence (CDS) from alignment at chr29:451205..451973+

>NO29G01410.1 ID=NO29G01410.1|Name=NO29G01410.1|organism=Nannochloropsis oceanica|type=CDS|length=663bp|location=Sequence derived from alignment at chr29:451205..451973+ (Nannochloropsis oceanica)
ATGGGGGCGGGCGTTGGCGAGGCGGTGGGGGCAAGTGTCGGGGCAGCCGA
TGATGCCACTGTTGGGGAAGCCGTGGGGAAGGAAGTCGGGGCACCAGTGG
GAGCGGCTGTTGGAAAGGCGGTAGGAGCAGCTGTGGGGGCAGCCTTGGTG
GGTCTGGACAAGGATGTGGTGAGGGATATGGCGGGAATCAAGTCTCAGCA
TTGCTTTGTGACGTGCGGTGGGTACGTTTTGATGTTTCCTACGTCCTGCA
CGTGCCAGCCTTGCAGGAACATGGAATATGATGAATGCGAGCTGGTGACG
TCGGGGGAGCGGGGAGGTGGGAAACGAATAGACCTGCAGACATTCGTTCC
TGCTATTCAGGAGGAGCGCACCACCTTTGGCTCCACCTTCGAGCGGGGGT
GGGCTGTGATGGCCAAATGCAAGGTGGACGATTGGGTGCTGATGCGTGCG
GACGTGGACCTACGCAAAGCATATTCGAAGACAAGCCCAAGAACTGGACA
TGTCGTAGTAGTTTCCGGCTGGCTCAAATCGCGGAGTTGCCAAAGCAGCG
CGCTACGGGAGAGAGGCTGTCGTCAACGGCGAGGAGGAGCGAGGGGAATT
TCCTTGTCTATTATGCGCAAGAGCACAAGCAAGAGGAACAGTGGCTCTTC
AAGTCAGCTCTAA
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Synonyms
Publications