NO29G01180, NO29G01180 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO29G01180
Unique Name	NO29G01180
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	1968
Alignment location	chr29:388641..390608 -

Link to JBrowse

Properties


Property Name	Value
Description	Serine/threonine-protein phosphatase 4 regulatory subunit 1

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr29	genome	chr29:388641..390608 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
PRJNA769958	2024-08-13
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005488	binding

Vocabulary: **INTERPRO**
Term	Definition
IPR016024	ARM-type_fold

Homology

[Close]

BLAST of NO29G01180 vs. NCBI_GenBank
Match: CBJ48502.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 114.0 bits (284), Expect = 1.800e-21
Identity = 71/202 (35.15%), Postives = 111/202 (54.95%), Query Frame = 0

Query:   91 VAKELQFAFDFFLQDVEEVRMGVLNNMASFLSSLPASSRRVYLPLLCEIATRTAPSQWRPRETLAKQLPALLPLFPLSALHSVFLPLSFALLEDPVAVVRERVFLAFGPLYDAFAKXXXXXXXXXXXXXXALLRRLAGMANAETYVKRQLFVHVALALP-STSRTLPRDLFLRQVLPRLLLLARDRVSNVRISFARDVRLLP 292
            V  +L  A + FL+D+E+VR+GV+ ++A F   +    R  +L +L EI   T+P  WR RE LA+QLP L PL    ++    +P++F LL DPVAVVRE+ F    PL                    +++ R+  +A+A TY  RQ++V++  ++  S +    R LF+++ +P L  LA D V NVRI+ +R +   P
Sbjct:  379 VEGDLVPAMEAFLRDMEDVRLGVIRHLADFFQEMTPQQREKHLNVLVEILQTTSPFNWRLREVLAQQLPRLAPLLTPDSVFFAVVPVAFGLLNDPVAVVREKTFEVVAPLLQ-------LAGAHSGARQASMVSRVRELAHAHTYQARQMYVYICHSMACSANVNHERPLFIQEFVPSLAELAMDSVVNVRIAMSRTLSKCP 573

[Close]

BLAST of NO29G01180 vs. NCBI_GenBank
Match: EXX51816.1 (Tpd3p [Rhizophagus irregularis DAOM 197198w] >PKC69575.1 ARM repeat-containing protein [Rhizophagus irregularis] >PKY20312.1 ARM repeat-containing protein [Rhizophagus irregularis] >POG82558.1 armadillo-type protein [Rhizophagus irregularis DAOM 181602=DAOM 197198])

HSP 1 Score: 96.7 bits (239), Expect = 2.900e-16
Identity = 67/202 (33.17%), Postives = 106/202 (52.48%), Query Frame = 0

Query:   84 RLSGPARVAKELQFAFDFFLQDVEEVRMGVLNNMASFLSSLPASSRRVYLPLLCEIATRTAPSQWRPRETLAKQLPALLPLFPLSALHSVFLPLSFALLEDPVAVVRERVFLAFGPLYDAFAKXXXXXXXXXXXXXXALLRRLAGMANAETYVKRQLFVHVALALPSTSRTLPRDLFLRQVLPRLLLLARDRVSNVRISFAR 286
            ++ GP++  ++L   F  +L D++EV+ G++ ++A F+  LP ++R  YLP L ++       QWR R+ +AKQLPAL  LF    + +  LPL+   ++D VA VRE    +F  L+                    +++R+   A+   +  R +FV +  AL ST    P++ F R  L  L  LA DRV NVRI+ AR
Sbjct:  530 KVIGPSKTERDLLSVFRSYLDDMDEVKSGLMEHLADFIECLPLNTRNDYLPSLNDV-WDGVNHQWRLRDEIAKQLPALCRLFNSQNVINHILPLTIRAIKDDVASVRETAVSSFPTLFQVVRNDESCYND--------MIKRVCEFASDNKFRGRVVFVQICNALVSTD--YPKEEFARHFLNDLEKLASDRVINVRIALAR 720

[Close]

BLAST of NO29G01180 vs. NCBI_GenBank
Match: GBC24169.1 (Protein serine/threonine phosphatase 4 regulatory subunit 1 [Rhizophagus irregularis DAOM 181602])

HSP 1 Score: 96.7 bits (239), Expect = 2.900e-16
Identity = 67/202 (33.17%), Postives = 106/202 (52.48%), Query Frame = 0

Query:   84 RLSGPARVAKELQFAFDFFLQDVEEVRMGVLNNMASFLSSLPASSRRVYLPLLCEIATRTAPSQWRPRETLAKQLPALLPLFPLSALHSVFLPLSFALLEDPVAVVRERVFLAFGPLYDAFAKXXXXXXXXXXXXXXALLRRLAGMANAETYVKRQLFVHVALALPSTSRTLPRDLFLRQVLPRLLLLARDRVSNVRISFAR 286
            ++ GP++  ++L   F  +L D++EV+ G++ ++A F+  LP ++R  YLP L ++       QWR R+ +AKQLPAL  LF    + +  LPL+   ++D VA VRE    +F  L+                    +++R+   A+   +  R +FV +  AL ST    P++ F R  L  L  LA DRV NVRI+ AR
Sbjct:  505 KVIGPSKTERDLLSVFRSYLDDMDEVKSGLMEHLADFIECLPLNTRNDYLPSLNDV-WDGVNHQWRLRDEIAKQLPALCRLFNSQNVINHILPLTIRAIKDDVASVRETAVSSFPTLFQVVRNDESCYND--------MIKRVCEFASDNKFRGRVVFVQICNALVSTD--YPKEEFARHFLNDLEKLASDRVINVRIALAR 695

[Close]

BLAST of NO29G01180 vs. NCBI_GenBank
Match: PKC02536.1 (ARM repeat-containing protein [Rhizophagus irregularis])

HSP 1 Score: 96.7 bits (239), Expect = 2.900e-16
Identity = 67/202 (33.17%), Postives = 106/202 (52.48%), Query Frame = 0

Query:   84 RLSGPARVAKELQFAFDFFLQDVEEVRMGVLNNMASFLSSLPASSRRVYLPLLCEIATRTAPSQWRPRETLAKQLPALLPLFPLSALHSVFLPLSFALLEDPVAVVRERVFLAFGPLYDAFAKXXXXXXXXXXXXXXALLRRLAGMANAETYVKRQLFVHVALALPSTSRTLPRDLFLRQVLPRLLLLARDRVSNVRISFAR 286
            ++ GP++  ++L   F  +L D++EV+ G++ ++A F+  LP ++R  YLP L ++       QWR R+ +AKQLPAL  LF    + +  LPL+   ++D VA VRE    +F  L+                    +++R+   A+   +  R +FV +  AL ST    P++ F R  L  L  LA DRV NVRI+ AR
Sbjct:  530 KVIGPSKTERDLLSVFRSYLDDMDEVKSGLMEHLADFIECLPLNTRNDYLPSLNDV-WDGVNHQWRLRDEIAKQLPALCRLFNSQNVINHILPLTIRAIKDDVASVRETAVSSFPTLFQVVRNDESCYND--------MIKRVCEFASDNKFRGRVVFVQICNALVSTD--YPKEEFARHFLNDLEKLASDRVINVRIALAR 720

[Close]

BLAST of NO29G01180 vs. NCBI_GenBank
Match: PKK74818.1 (ARM repeat-containing protein [Rhizophagus irregularis])

HSP 1 Score: 96.7 bits (239), Expect = 2.900e-16
Identity = 67/202 (33.17%), Postives = 106/202 (52.48%), Query Frame = 0

Query:   84 RLSGPARVAKELQFAFDFFLQDVEEVRMGVLNNMASFLSSLPASSRRVYLPLLCEIATRTAPSQWRPRETLAKQLPALLPLFPLSALHSVFLPLSFALLEDPVAVVRERVFLAFGPLYDAFAKXXXXXXXXXXXXXXALLRRLAGMANAETYVKRQLFVHVALALPSTSRTLPRDLFLRQVLPRLLLLARDRVSNVRISFAR 286
            ++ GP++  ++L   F  +L D++EV+ G++ ++A F+  LP ++R  YLP L ++       QWR R+ +AKQLPAL  LF    + +  LPL+   ++D VA VRE    +F  L+                    +++R+   A+   +  R +FV +  AL ST    P++ F R  L  L  LA DRV NVRI+ AR
Sbjct:  530 KVIGPSKTERDLLSVFRSYLDDMDEVKSGLMEHLADFIECLPLNTRNDYLPSLNDV-WDGVNHQWRLRDEIAKQLPALCRLFNSQNVINHILPLTIRAIKDDVASVRETAVSSFPTLFQVVRNDESCYND--------MIKRVCEFASDNKFRGRVVFVQICNALVSTD--YPKEEFARHFLNDLEKLASDRVINVRIALAR 720

[Close]

BLAST of NO29G01180 vs. NCBI_GenBank
Match: PKY40528.1 (ARM repeat-containing protein [Rhizophagus irregularis])

HSP 1 Score: 96.3 bits (238), Expect = 3.800e-16
Identity = 67/202 (33.17%), Postives = 106/202 (52.48%), Query Frame = 0

Query:   84 RLSGPARVAKELQFAFDFFLQDVEEVRMGVLNNMASFLSSLPASSRRVYLPLLCEIATRTAPSQWRPRETLAKQLPALLPLFPLSALHSVFLPLSFALLEDPVAVVRERVFLAFGPLYDAFAKXXXXXXXXXXXXXXALLRRLAGMANAETYVKRQLFVHVALALPSTSRTLPRDLFLRQVLPRLLLLARDRVSNVRISFAR 286
            ++ GP++  ++L   F  +L D++EV+ G++ ++A F+  LP ++R  YLP L ++       QWR R+ +AKQLPAL  LF    + +  LPL+   ++D VA VRE    +F  L+                    +++R+   A+   +  R +FV +  AL ST    P++ F R  L  L  LA DRV NVRI+ AR
Sbjct:  530 KVIGPSKTDRDLLSVFRSYLDDMDEVKSGLMEHLADFIECLPLNTRNDYLPSLNDV-WDGVNHQWRLRDEIAKQLPALCRLFNSQNVINHILPLTIRAIKDDVASVRETAVSSFPTLFQVVRNDESCYND--------MIKRVCEFASDNKFRGRVVFVQICNALVSTD--YPKEEFARHFLNDLEKLASDRVINVRIALAR 720

[Close]

BLAST of NO29G01180 vs. NCBI_GenBank
Match: XP_004338167.1 (protein phosphatase 4 regulatory subunit 1, putative [Acanthamoeba castellanii str. Neff] >ELR16154.1 protein phosphatase 4 regulatory subunit 1, putative [Acanthamoeba castellanii str. Neff])

HSP 1 Score: 92.8 bits (229), Expect = 4.200e-15
Identity = 61/199 (30.65%), Postives = 106/199 (53.27%), Query Frame = 0

Query:   87 GPARVAKELQFAFDFFLQDVEEVRMGVLNNMASFLSSLPASSRRVYLPLLCEIATRTAPSQWRPRETLAKQLPALLPLFPLSALHSVFLPLSFALLEDPVAVVRERVFLAFGPLYDAFAKXXXXXXXXXXXXXXALLRRLAGMANAETYVKRQLFVHVALALPSTSRTLPRDLFLRQVLPRLLLLARDRVSNVRISFAR 286
            G     K+L   F+ F++D++EV++GV+ +++ FLS L  +SR  YLPL+C+I   T  S WR R+ +A+QL  L  L+    ++   +P+S  L +D V+ VR+  +++ GPL    A+              A     A      +Y+ RQ++V++  A+      +  + F+   LP L  LA D+V NVR++ ++
Sbjct:  357 GQELTEKDLCPFFELFMKDLDEVKVGVVKHISEFLSVLSEASREKYLPLVCDITNET--SNWRFRKLMARQLGKLSALYSAPVVNKHLVPISLQLCQDAVSGVRKAAYMSVGPLMRRVAEGDQRMRDEYVEQIVA----FASTFPDTSYLDRQMYVNICGAIVD---DVSPEYFVETFLPHLFALAIDKVPNVRVAVSQ 546

[Close]

BLAST of NO29G01180 vs. NCBI_GenBank
Match: XP_017880449.1 (PREDICTED: serine/threonine-protein phosphatase 4 regulatory subunit 1-like isoform X1 [Ceratina calcarata])

HSP 1 Score: 92.0 bits (227), Expect = 7.200e-15
Identity = 73/215 (33.95%), Postives = 106/215 (49.30%), Query Frame = 0

Query:   87 GPARVAKELQFAFDFFLQDVEEVRMGVLNNMASFLSSLPASSRRVYLPLLCEIATRTAPSQWRPRETLAKQLPALLPLFPLSALHSVFLPLSFALLEDPVAVVRERVFLAFGPLYDAFAKXXXXXXXXXXXXXXALLRRLAGMAN--AETYVKRQLFVHVALALPSTSRTLPRDLFLRQVLPRLLLLARDRVSNVRISFARD-----VRLLPEWV 295
            G    A +L   +D F++D++EVR+GVL ++A+FL  L  + RR YLP L E  T    S WR RE LA QL  ++ LF  + +    +PLS  LL D VA VR            +                 AL + L       A+ +++RQ F  V   L S +  +  D F +++LP LL L+ D+V NVR++ AR      V + PEW+
Sbjct:  581 GEELTATDLVPIYDGFIKDLDEVRIGVLKHLATFLKILKPADRRQYLPRLKEFLTTDNESNWRFREELATQLLEIVNLFGPADVERHIVPLSLELLGDKVAAVRHVAL--------SLVTQIVAHLSDNERLVTALFQELKFSLGVYAKKWIRRQTFAFVCAKLIS-NNAISGDRFSQEMLPNLLKLSLDKVPNVRLAVARTLSRNVVPMGPEWL 786

[Close]

BLAST of NO29G01180 vs. NCBI_GenBank
Match: XP_017880451.1 (PREDICTED: serine/threonine-protein phosphatase 4 regulatory subunit 1-like isoform X3 [Ceratina calcarata])

HSP 1 Score: 92.0 bits (227), Expect = 7.200e-15
Identity = 73/215 (33.95%), Postives = 106/215 (49.30%), Query Frame = 0

Query:   87 GPARVAKELQFAFDFFLQDVEEVRMGVLNNMASFLSSLPASSRRVYLPLLCEIATRTAPSQWRPRETLAKQLPALLPLFPLSALHSVFLPLSFALLEDPVAVVRERVFLAFGPLYDAFAKXXXXXXXXXXXXXXALLRRLAGMAN--AETYVKRQLFVHVALALPSTSRTLPRDLFLRQVLPRLLLLARDRVSNVRISFARD-----VRLLPEWV 295
            G    A +L   +D F++D++EVR+GVL ++A+FL  L  + RR YLP L E  T    S WR RE LA QL  ++ LF  + +    +PLS  LL D VA VR            +                 AL + L       A+ +++RQ F  V   L S +  +  D F +++LP LL L+ D+V NVR++ AR      V + PEW+
Sbjct:  574 GEELTATDLVPIYDGFIKDLDEVRIGVLKHLATFLKILKPADRRQYLPRLKEFLTTDNESNWRFREELATQLLEIVNLFGPADVERHIVPLSLELLGDKVAAVRHVAL--------SLVTQIVAHLSDNERLVTALFQELKFSLGVYAKKWIRRQTFAFVCAKLIS-NNAISGDRFSQEMLPNLLKLSLDKVPNVRLAVARTLSRNVVPMGPEWL 779

[Close]

BLAST of NO29G01180 vs. NCBI_GenBank
Match: XP_017880452.1 (PREDICTED: serine/threonine-protein phosphatase 4 regulatory subunit 1-like isoform X4 [Ceratina calcarata])

HSP 1 Score: 92.0 bits (227), Expect = 7.200e-15
Identity = 73/215 (33.95%), Postives = 106/215 (49.30%), Query Frame = 0

Query:   87 GPARVAKELQFAFDFFLQDVEEVRMGVLNNMASFLSSLPASSRRVYLPLLCEIATRTAPSQWRPRETLAKQLPALLPLFPLSALHSVFLPLSFALLEDPVAVVRERVFLAFGPLYDAFAKXXXXXXXXXXXXXXALLRRLAGMAN--AETYVKRQLFVHVALALPSTSRTLPRDLFLRQVLPRLLLLARDRVSNVRISFARD-----VRLLPEWV 295
            G    A +L   +D F++D++EVR+GVL ++A+FL  L  + RR YLP L E  T    S WR RE LA QL  ++ LF  + +    +PLS  LL D VA VR            +                 AL + L       A+ +++RQ F  V   L S +  +  D F +++LP LL L+ D+V NVR++ AR      V + PEW+
Sbjct:  516 GEELTATDLVPIYDGFIKDLDEVRIGVLKHLATFLKILKPADRRQYLPRLKEFLTTDNESNWRFREELATQLLEIVNLFGPADVERHIVPLSLELLGDKVAAVRHVAL--------SLVTQIVAHLSDNERLVTALFQELKFSLGVYAKKWIRRQTFAFVCAKLIS-NNAISGDRFSQEMLPNLLKLSLDKVPNVRLAVARTLSRNVVPMGPEWL 721

The following BLAST results are available for this feature:

BLAST of NO29G01180 vs. NCBI_GenBank

BLAST of NO29G01180 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
CBJ48502.1	1.800e-21	35.15	conserved unknown protein [Ectocarpus siliculosus]	[more]
EXX51816.1	2.900e-16	33.17	Tpd3p [Rhizophagus irregularis DAOM 197198w] >PKC6...	[more]
GBC24169.1	2.900e-16	33.17	Protein serine/threonine phosphatase 4 regulatory ...	[more]
PKC02536.1	2.900e-16	33.17	ARM repeat-containing protein [Rhizophagus irregul...	[more]
PKK74818.1	2.900e-16	33.17	ARM repeat-containing protein [Rhizophagus irregul...	[more]
PKY40528.1	3.800e-16	33.17	ARM repeat-containing protein [Rhizophagus irregul...	[more]
XP_004338167.1	4.200e-15	30.65	protein phosphatase 4 regulatory subunit 1, putati...	[more]
XP_017880449.1	7.200e-15	33.95	PREDICTED: serine/threonine-protein phosphatase 4 ...	[more]
XP_017880451.1	7.200e-15	33.95	PREDICTED: serine/threonine-protein phosphatase 4 ...	[more]
XP_017880452.1	7.200e-15	33.95	PREDICTED: serine/threonine-protein phosphatase 4 ...	[more]

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Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL061	nonsL061	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR038	ncniR038	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR081	ngnoR081	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK005242	NSK005242	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO29G01180.1	NO29G01180.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|559352	gene_8294	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO29G01180.1	NO29G01180.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO29G01180 ID=NO29G01180|Name=NO29G01180|organism=Nannochloropsis oceanica|type=gene|length=1968bp
ATGGTGAGGAAGACGCTGGCGTGCTCACTGCATGAGATGGCCAAGGTGAT
GGGAGGGGGGGGGGAAGAGGGAGGGGTGCCGCTAGTGGGCAAGGGGAAAG
AGAGGAAGGCGAACGCAGAGGCAGAGGGAGAGAATGAGGGCGGGTTGGTG
GGGGGAATGGTGAGAGTGTCGATTGCTGGGGAGAGAGGGAGGGTGGAGGG
TAAGGAGGAGGAGGGTGCGGAGGAGGAGGAGGAGGAGGAGGTATGGCAAC
GGCTGTCCGGTCCAGCGCGAGTGGCGAAAGAGCTTCAATTTGCCTTTGAT
TTCTTCTTGCAGGACGTGGAGGAGGTGCGTATGGGCGTGTTGAACAACAT
GGCCTCCTTTCTATCCTCCCTCCCCGCCTCTTCCCGACGCGTCTACCTCC
CCCTCCTCTGTGAGATCGCCACTAGAACTGCCCCCTCCCAGTGGCGGCCC
AGGGAAACGCTCGCCAAGCAGCTCCCTGCCCTCCTCCCGCTCTTCCCCCT
CTCTGCTTTGCACTCGGTCTTCTTGCCACTGTCTTTTGCCTTGTTGGAGG
ACCCCGTGGCCGTGGTGAGAGAGAGGGTGTTTCTCGCTTTTGGGCCCTTG
TACGACGCGTTTGCCAAGGAGGAGGAGGAGGAGGAGGAAGAGGGGGGGGA
GGGGAGGGAGGCGCTGCTCCGGCGGCTGGCAGGGATGGCGAACGCGGAGA
CGTATGTGAAGAGGCAATTATTCGTCCATGTGGCCCTCGCCCTTCCCTCC
ACCTCCCGCACCCTCCCCCGGGACCTCTTCCTCCGGCAAGTCCTCCCTCG
GCTCCTGCTTCTTGCCAGGGACAGGGTCTCCAACGTCCGCATTTCGTTTG
CGAGGGACGTCAGGTTGTTGCCCGAGTGGGTATTTCAAGCGGCTGAAGCT
GCTGCTGCTGCTGGTGCTGATACTGCTGCTTCTACTGGTGATGGTGGTGG
AGCAGCGACTGAAAATGATGACGTGAAAGAAATCAGTGGAAATGACGAGA
GGGAGGAGGATAGCTCGTCTCCCCTTTCCATCTCCTCCTCGTCATCCCCC
TTCCCCTCCTCCCCCCTAGCCCTCACCCTCCTTCATCTCCTCAACGACGA
CCCCCACAGCGACGTCCGCCTCTACATGGGCAAGTGCCGCAAGGAACGGG
CAGACTTGGCGCCTCTCTTCAACTCCCGCCGCGCTGTCCCTCCCTCCCTT
CCTCCTCCTCAAACTCTACCTCCTTCACTAATATCGGAGGGGGAGGGCGA
AGGGGAGGAAGGGAGCGAGGAAGGGCAGAGGAGCCTGCACGGAGGGTCTA
TGGTAGAGCTTGTCGCACCTCTTTCTCCTTCACATGCGGTAGCCCTTCCT
CCCTCCCTTCCTCCTTCTTCCCTTCGTCCTTTCGAGGCCGGCAACTCGGT
CTTCCCTTCTTCTTCTTCTTCTTCTTCTTCATGTTCCCACCCTCTTCCTC
CTCCTCTTCCTCGACCTCTTTATCCTGCTTCCTCCCCTCCTCCTCCTACC
ACAGCCTCCTCCTATCTAGAGGACGAGATAACTCGGCTCTCCCCTCCTCC
TCCCTCCCTCACCACCACCTCCTCTCTGGTGGACATGGCCTCCCTCCTTC
TCCCCCCTATAGCCACGGCGAGCTCTTTCTTTGGAAAAGGGGAAGGTCTA
GAAGAGGGAGGAGAAAGAATTGGAGAAAAGTCGCCTCGTTCCCATCGTTC
TGTCCTCCACCCCTCTTCCCCCCTGGAAGAAGAAATTGCTCTCCTCTCCT
CCCCTGCAGCCGCTGCTGCCGAAGCTCCTCCCTCTCCTCTCTCTCCGGGT
TTTCGTCCTTTTCCTCCCCTAACCTGCTTCTTCTCCGACGACTCCTCCTC
CCTCTCGGACGATCCCAACGCTGCTGTGGACCCCCATCATATACACGACA
TTCTCACACACCTTACCCACGATCAAAATTACTGCCAATCCCACACTGAA
CACCGAAAGAAGGATTAG

protein sequence of NO29G01180.1

>NO29G01180.1-protein ID=NO29G01180.1-protein|Name=NO29G01180.1|organism=Nannochloropsis oceanica|type=polypeptide|length=656bp
MVRKTLACSLHEMAKVMGGGGEEGGVPLVGKGKERKANAEAEGENEGGLV
GGMVRVSIAGERGRVEGKEEEGAEEEEEEEVWQRLSGPARVAKELQFAFD
FFLQDVEEVRMGVLNNMASFLSSLPASSRRVYLPLLCEIATRTAPSQWRP
RETLAKQLPALLPLFPLSALHSVFLPLSFALLEDPVAVVRERVFLAFGPL
YDAFAKEEEEEEEEGGEGREALLRRLAGMANAETYVKRQLFVHVALALPS
TSRTLPRDLFLRQVLPRLLLLARDRVSNVRISFARDVRLLPEWVFQAAEA
AAAAGADTAASTGDGGGAATENDDVKEISGNDEREEDSSSPLSISSSSSP
FPSSPLALTLLHLLNDDPHSDVRLYMGKCRKERADLAPLFNSRRAVPPSL
PPPQTLPPSLISEGEGEGEEGSEEGQRSLHGGSMVELVAPLSPSHAVALP
PSLPPSSLRPFEAGNSVFPSSSSSSSSCSHPLPPPLPRPLYPASSPPPPT
TASSYLEDEITRLSPPPPSLTTTSSLVDMASLLLPPIATASSFFGKGEGL
EEGGERIGEKSPRSHRSVLHPSSPLEEEIALLSSPAAAAAEAPPSPLSPG
FRPFPPLTCFFSDDSSSLSDDPNAAVDPHHIHDILTHLTHDQNYCQSHTE
HRKKD*

Synonyms

Publications