jgi.p|Nanoce1779_2|559352, gene_8294 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|559352
Unique Namegene_8294
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_23:291900..296551 -

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Properties
Property NameValue
TranscriptId559438
ProteinId559352
Product nameArmadillo-type fold
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_23supercontigscaffold_23:291900..296551 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL038ncniL038Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO29G01180NO29G01180Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|559352mRNA_8294-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|559352mRNA_8294Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|559352

>mRNA_8294-protein ID=mRNA_8294-protein|Name=jgi.p|Nanoce1779_2|559352|organism=Nannochloropsis oceanica|type=polypeptide|length=1055bp
MREEPQMATFEDLSIDDSLDLLSRVQQYGTSNIALQRLVHVKMLTEAADS
VPYDALHDRLLPLLRILATDNEWVVRQHLGEQLGGVARACVKPQGEGRLE
EGPEGRGGQGPVGGEGGREGPGYRGVLELLLPLVHKLLNDNQEEVRLSTG
VSLCEICALLKQEDRGKHALTLVLQLAHDDEQEELRMTAAKLLNDMVESL
GPDLCHQFISPELVSLAEDPVFRVRKAAALSLHAACATAGEPDTTDRLLP
AFIRLSKDDIYRVRKACAEALVDLSKAVSTDLRGGVLLEVFSRLSTDSSQ
FVRQAALQQLGPFLTTLPPEKVSAELLGLFTAMGLGEGEGGEGGVGGGGM
LSGNEVRLWCAFSFPGVLWRVGWRRWREGGKEGGLRGAYGRLVRDGHWMV
RKTLACSLHEMAKVMGGGGEEGGVPLVGKGKERKANAEAEGENEGGLVGG
MVRVSIAGERGRVEGKEEEGAEEEEEEEVWQRLSGPARVAKELQFAFDFF
LRDVEEVRMGVLNNMASFLSSLPASSRRVYLPLLCEIATRTAPSQWRPRE
TLAKQLPALLPLFPLSALHSVFLPLSFALLEDPVAVVRERVFLAFGPLYD
AFAKEEEEEEEEEGGEGREALLRRLAGMANAETYVKRQLFVHVALALPST
SRTLPRDLFLRQVLPRLLLLARDRVSNVRISFARDVRLLPEWVFQAAEAA
AAAGADTAASTGDGGGAATENDDVKEISGNDEREEDSSSPLSISSSSSPF
PSSPLALTLLHLLNDDPHSDVRLYMGKCRKERADLAPLFNSRRAVPPSLP
PPQTLPPSLISEGEGEGEEGSEEGQRSPHGGSMVELVAPLSPSHAVALPP
SLPPSSLRPFEAGNSVFPSSSSSSSSCSHPLPPPLPRPLYPASSPPPPTT
ASSYLEDEITRLSPPPPSLTTTSSLVDMASLLLPPIATASSFFGKGEGLE
EGGERIGEKSPRSHRSVLHPSSPLEEEIALLSSPAAAAAEAPPSPLSPGF
RPFPPLTCFFSDDSSSLSDDPNAAVDPHHIHDILTHLTHDQNYCQSHTEH
RKKD*
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Synonyms
Publications