NO29G01010, NO29G01010 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO29G01010 vs. NCBI_GenBank
Match: EWM21310.1 (atp-dependent protease la [Nannochloropsis gaditana]) HSP 1 Score: 459.5 bits (1181), Expect = 1.300e-125 Identity = 248/365 (67.95%), Postives = 280/365 (76.71%), Query Frame = 0 Query: 1 MAESCMVALTWVKAKNRDLVRWMGMVEGREGEGTGGLLIDLLRPDMDVHINFPSCEAEKNGPSAGATVATSLVLMMTGARLRPNVAISGEINLRGELLPIGNVKEKVAAAARQGITHIVLSSANIKQFKRLPTKARNAVKALKADHMVEVLKHAVEPPGRGRGGYVSRYEHCVRKVEKMGTTASLACSHVKGKVQWVECCATFGRGDWHITGNVQEGTRGSVLVARTWVRRHAASIVARLGRGARVRVELCALKGLGPEWRGRGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTILPPSSFGVEDPPSSSPLPAPQLDMHVHLPETEVAKDVSINGAAAAVSLIAVMTGLAVRP 366 MAESCMVAL+WVKAK RDL WM + EG +GEG+ G L+DL RPD+DVH+NFPSCEAEKNGPSAGATVATSLVLMMTGA+L PN+AISGEINL+G+LLPIGNVKEKVAAAARQGITHIVLSSAN+KQF+RLP + RNAVKALKA+H+VEVLKHAV PPG GR GY +RYEH +R+V +G ASLACSHVKG+VQWVECCAT GRG+WHITGNV EGTRGSVLVARTWVRR+AA+IVARLG V+VELCAL GLGP WR RG P + DP + LP PQLD+H+H+P T+VAKDVSINGAAAAVS+IAVMTGLAVRP Sbjct: 241 MAESCMVALSWVKAKKRDLCLWMSL-EGEDGEGS-GCLVDLHRPDLDVHVNFPSCEAEKNGPSAGATVATSLVLMMTGAQLLPNIAISGEINLKGDLLPIGNVKEKVAAAARQGITHIVLSSANVKQFRRLPARIRNAVKALKANHIVEVLKHAVLPPG-GR-GYQARYEHRLREVAGLGLAASLACSHVKGRVQWVECCATTGRGEWHITGNVLEGTRGSVLVARTWVRRNAAAIVARLGGKTSVQVELCALHGLGPAWRLRGKETGAVGPALAAGTPSLPLEPSRRSNGKHPLSP----------SPGTLASGDP---ALLPPPQLDLHIHMPGTDVAKDVSINGAAAAVSMIAVMTGLAVRP 588
BLAST of NO29G01010 vs. NCBI_GenBank
Match: GAQ80864.1 (Lon protease [Klebsormidium nitens]) HSP 1 Score: 116.7 bits (291), Expect = 2.100e-22 Identity = 64/163 (39.26%), Postives = 97/163 (59.51%), Query Frame = 0 Query: 3 ESCMVALTWVKAKNRDLVRWMGMVEGREGEGTGGLLIDLLRPDMDVHINFPSCEAEKNGPSAGATVATSLVLMMTGARLRPNVAISGEINLRGELLPIGNVKEKVAAAARQGITHIVLSSANIKQFKRLPTKARNAVKALKADHMVEVLKHAVEPPGRGRGGY 166 ES +ALTWV+A+ ++L + G+ +G+ L +DVHI+FP+ K+GPSAG T+AT+LV +++G LR + A++GE+ LRG +LP+G VK+KV AA R G+ ++L N+K K +P ++ A M +VL HA E GGY Sbjct: 745 ESAQIALTWVRARAQEL-----NLHGKRADGS-------LVEGLDVHIHFPAGAVPKDGPSAGVTMATALVSLLSGRCLRADTAMTGEVTLRGLVLPVGGVKDKVLAAHRMGVKRVILPERNVKDLKEVPENVLKELEICPALRMEDVLTHAFE------GGY 889
BLAST of NO29G01010 vs. NCBI_GenBank
Match: KOO31430.1 (ATP-dependent protease la [Chrysochromulina sp. CCMP291]) HSP 1 Score: 111.3 bits (277), Expect = 8.600e-21 Identity = 60/157 (38.22%), Postives = 94/157 (59.87%), Query Frame = 0 Query: 1 MAESCMVALTWVKAKNRDLVRWMGMVEGREGEGTGGLLIDLLRPDMDVHINFPSCEAEKNGPSAGATVATSLVLMMTGARLRPNVAISGEINLRGELLPIGNVKEKVAAAARQGITHIVLSSANIKQFKRLPTKARNAVKALKADHMVEVLKHAVEP 158 M ES M A +W++A +L G+V G +GG L L D+HI+FP+ K+GPSAG T+ T++V ++TG ++RP++A++GE+ LRG +LP+G +KEKV AA R G+ ++L + N K + LP + + + EVL A+ P Sbjct: 370 MKESAMAARSWIRAHAHEL----GLVGAEPGAVSGGPLGHFLN-STDLHIHFPAGAVPKDGPSAGVTITTAIVSLLTGRKVRPDLAMTGEVTLRGLVLPVGGIKEKVIAAHRGGMRTVILPAKNEKDLRELPQTVLRDMTFILVREIREVLDAALLP 521
BLAST of NO29G01010 vs. NCBI_GenBank
Match: XP_023752825.1 (lon protease homolog 2, peroxisomal-like isoform X1 [Lactuca sativa] >PLY93801.1 hypothetical protein LSAT_6X89400 [Lactuca sativa]) HSP 1 Score: 111.3 bits (277), Expect = 8.600e-21 Identity = 60/154 (38.96%), Postives = 90/154 (58.44%), Query Frame = 0 Query: 3 ESCMVALTWVKAKNRDLVRWMGMVEGREGEGTGGLLIDLLRPDMDVHINFPSCEAEKNGPSAGATVATSLVLMMTGARLRPNVAISGEINLRGELLPIGNVKEKVAAAARQGITHIVLSSANIKQFKRLPTKARNAVKALKADHMVEVLKHAVE 157 ES +ALTWV+A+ +L +V E L DVHI+FP+ K+GPSAG T+ TSLV + + R+RP+ A++GE+ LRG +LP+G +K+KV AA R GI +++ N+K +P +++ L A M +VL+HA E Sbjct: 731 ESAQIALTWVRARANEL----DLVSAEEKN---------LLEGRDVHIHFPAGAVPKDGPSAGVTLVTSLVSLFSRRRVRPDTAMTGEMTLRGLVLPVGGIKDKVLAAHRYGIKRVIMPERNLKDLVEVPAAVLGSLEILLAKRMEDVLQHAFE 871
BLAST of NO29G01010 vs. NCBI_GenBank
Match: XP_023752826.1 (lon protease homolog 2, peroxisomal-like isoform X2 [Lactuca sativa] >XP_023752827.1 lon protease homolog 2, peroxisomal-like isoform X2 [Lactuca sativa]) HSP 1 Score: 111.3 bits (277), Expect = 8.600e-21 Identity = 60/154 (38.96%), Postives = 90/154 (58.44%), Query Frame = 0 Query: 3 ESCMVALTWVKAKNRDLVRWMGMVEGREGEGTGGLLIDLLRPDMDVHINFPSCEAEKNGPSAGATVATSLVLMMTGARLRPNVAISGEINLRGELLPIGNVKEKVAAAARQGITHIVLSSANIKQFKRLPTKARNAVKALKADHMVEVLKHAVE 157 ES +ALTWV+A+ +L +V E L DVHI+FP+ K+GPSAG T+ TSLV + + R+RP+ A++GE+ LRG +LP+G +K+KV AA R GI +++ N+K +P +++ L A M +VL+HA E Sbjct: 574 ESAQIALTWVRARANEL----DLVSAEEKN---------LLEGRDVHIHFPAGAVPKDGPSAGVTLVTSLVSLFSRRRVRPDTAMTGEMTLRGLVLPVGGIKDKVLAAHRYGIKRVIMPERNLKDLVEVPAAVLGSLEILLAKRMEDVLQHAFE 714
BLAST of NO29G01010 vs. NCBI_GenBank
Match: OVA12720.1 (Peptidase S16 [Macleaya cordata]) HSP 1 Score: 110.5 bits (275), Expect = 1.500e-20 Identity = 59/153 (38.56%), Postives = 91/153 (59.48%), Query Frame = 0 Query: 3 ESCMVALTWVKAKNRDL-VRWMGMVEGREGEGTGGLLIDLLRPDMDVHINFPSCEAEKNGPSAGATVATSLVLMMTGARLRPNVAISGEINLRGELLPIGNVKEKVAAAARQGITHIVLSSANIKQFKRLPTKARNAVKALKADHMVEVLKHA 155 ES +ALTWV+A+ DL + G + EG+ DVHI+FP+ K+GPSAG T+ TSLV + + R+RP+ A++GE+ LRG +LP+G +K+K+ AA R GI ++L N+K +P ++++ L M +VL+HA Sbjct: 736 ESAQIALTWVRARASDLKLVASGNISLMEGQ--------------DVHIHFPAGAVPKDGPSAGVTLVTSLVSLFSQQRVRPDTAMTGEMTLRGLVLPVGGIKDKILAAHRYGIKRVILPERNLKDLVEVPAAVLSSIEILLVKRMEDVLEHA 874
BLAST of NO29G01010 vs. NCBI_GenBank
Match: XP_023742192.1 (lon protease homolog 2, peroxisomal-like isoform X1 [Lactuca sativa] >PLY67410.1 hypothetical protein LSAT_6X67340 [Lactuca sativa]) HSP 1 Score: 110.5 bits (275), Expect = 1.500e-20 Identity = 60/154 (38.96%), Postives = 89/154 (57.79%), Query Frame = 0 Query: 3 ESCMVALTWVKAKNRDLVRWMGMVEGREGEGTGGLLIDLLRPDMDVHINFPSCEAEKNGPSAGATVATSLVLMMTGARLRPNVAISGEINLRGELLPIGNVKEKVAAAARQGITHIVLSSANIKQFKRLPTKARNAVKALKADHMVEVLKHAVE 157 ES +ALTWV+A+ +L EG EG D+HI+FP+ K+GPSAG T+ TSLV + + R+R + A++GEI LRG +LP+G +K+KV AA R G+ ++L N+K +P +++ L A M +VL+HA E Sbjct: 743 ESAQIALTWVRARAAELNLGCAQGEGNLLEG------------RDIHIHFPAGAVPKDGPSAGVTLVTSLVSLFSRRRVRSDTAMTGEITLRGLVLPVGGIKDKVLAAHRNGLKRVILPERNLKDLVEVPPAVLASMEILLAKRMEDVLEHAFE 884
BLAST of NO29G01010 vs. NCBI_GenBank
Match: XP_023742193.1 (lon protease homolog 2, peroxisomal-like isoform X2 [Lactuca sativa]) HSP 1 Score: 110.5 bits (275), Expect = 1.500e-20 Identity = 60/154 (38.96%), Postives = 89/154 (57.79%), Query Frame = 0 Query: 3 ESCMVALTWVKAKNRDLVRWMGMVEGREGEGTGGLLIDLLRPDMDVHINFPSCEAEKNGPSAGATVATSLVLMMTGARLRPNVAISGEINLRGELLPIGNVKEKVAAAARQGITHIVLSSANIKQFKRLPTKARNAVKALKADHMVEVLKHAVE 157 ES +ALTWV+A+ +L EG EG D+HI+FP+ K+GPSAG T+ TSLV + + R+R + A++GEI LRG +LP+G +K+KV AA R G+ ++L N+K +P +++ L A M +VL+HA E Sbjct: 742 ESAQIALTWVRARAAELNLGCAQGEGNLLEG------------RDIHIHFPAGAVPKDGPSAGVTLVTSLVSLFSRRRVRSDTAMTGEITLRGLVLPVGGIKDKVLAAHRNGLKRVILPERNLKDLVEVPPAVLASMEILLAKRMEDVLEHAFE 883
BLAST of NO29G01010 vs. NCBI_GenBank
Match: OMP08170.1 (hypothetical protein COLO4_06710 [Corchorus olitorius]) HSP 1 Score: 109.8 bits (273), Expect = 2.500e-20 Identity = 58/154 (37.66%), Postives = 91/154 (59.09%), Query Frame = 0 Query: 3 ESCMVALTWVKAKNRDLVRWMGMVEGREGEGTGGLLIDLLRPDMDVHINFPSCEAEKNGPSAGATVATSLVLMMTGARLRPNVAISGEINLRGELLPIGNVKEKVAAAARQGITHIVLSSANIKQFKRLPTKARNAVKALKADHMVEVLKHAVE 157 ES +ALTWV+A+ DL + GEGT L D+HI+FP+ K+GPSAG T+ T+LV + + +R + A++GE+ LRG +LP+G +K+K+ AA R G+ ++L N+K +P ++++ L A M +VL+HA E Sbjct: 616 ESAQIALTWVRARAADL-------KLAAGEGTN------LLQGRDIHIHFPAGAVPKDGPSAGVTLVTALVSLFSQKSVRADTAMTGEMTLRGLVLPVGGIKDKILAAHRHGVKRVILPERNLKDLVEVPAAVLSSLEILLAKRMEDVLEHAFE 756
BLAST of NO29G01010 vs. NCBI_GenBank
Match: XP_013457545.1 (lon protease homolog 2, peroxisomal [Medicago truncatula] >KEH31576.1 lon-related ATP-dependent protease, putative [Medicago truncatula]) HSP 1 Score: 109.0 bits (271), Expect = 4.300e-20 Identity = 60/158 (37.97%), Postives = 89/158 (56.33%), Query Frame = 0 Query: 3 ESCMVALTWVKAKNRDL----VRWMGMVEGREGEGTGGLLIDLLRPDMDVHINFPSCEAEKNGPSAGATVATSLVLMMTGARLRPNVAISGEINLRGELLPIGNVKEKVAAAARQGITHIVLSSANIKQFKRLPTKARNAVKALKADHMVEVLKHAVE 157 ES +ALTWV+A+ DL + ++EGR DVHI+FP+ K+GPSAG T+ TSLV + T +R + A++GE+ LRG +LP+G VK+K+ AA R GI ++L N+K +P ++ L A M +VL+HA + Sbjct: 737 ESAQIALTWVRARTTDLKVDAAKGFNLLEGR-----------------DVHIHFPAGAVPKDGPSAGVTLVTSLVSLFTQKSVRSDTAMTGEMTLRGLVLPVGGVKDKILAAHRYGIKRVILPERNLKDLAEVPASVLANLEILLAKRMEDVLEHAFD 877 The following BLAST results are available for this feature:
BLAST of NO29G01010 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO29G01010 ID=NO29G01010|Name=NO29G01010|organism=Nannochloropsis oceanica|type=gene|length=1852bpback to top protein sequence of NO29G01010.1 >NO29G01010.1-protein ID=NO29G01010.1-protein|Name=NO29G01010.1|organism=Nannochloropsis oceanica|type=polypeptide|length=496bpback to top Synonyms
Publications
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