NO29G00960, NO29G00960 (gene) Nannochloropsis oceanica

Overview
NameNO29G00960
Unique NameNO29G00960
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4019
Alignment locationchr29:331864..335882 -

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Properties
Property NameValue
DescriptionS-adenosylmethionine decarboxylase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr29genomechr29:331864..335882 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006597spermine biosynthetic process
GO:0008295spermidine biosynthetic process
GO:0009987cellular process
GO:0009058biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0004014adenosylmethionine decarboxylase activity
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR016067S-AdoMet_deCO2ase_core
IPR001985S-AdoMet_decarboxylase
Homology
BLAST of NO29G00960 vs. NCBI_GenBank
Match: EWM21312.1 (s-adenosylmethionine decarboxylase [Nannochloropsis gaditana])

HSP 1 Score: 651.7 bits (1680), Expect = 1.900e-183
Identity = 320/379 (84.43%), Postives = 335/379 (88.39%), Query Frame = 0
Query:  149 YVAGCFEGPEKTLEVCFKPGVGHARGCRELTRKQLDVLCKQARCTILNQISNQYQDAYVLSESSLFVWPFKMMLKTCGTTTLLRCLPRLLKYTALLGLELEWVGYSRKNYSFPGDQFFPHSSFDQELAYLKSHSKLSAKLNGSGYVLGPVTGDHFYVYVADQCVRPSYECHDRVLNIMMFDMDPDAASVFYKGTGGARDAKEMTQKSGIADLVPGAQIDAFAFDPCGYSMNAITYGNYATIHVTPEAECSYASFETNTPLKSYDSLINNVLRVFRPRRFVLTMMADDGAVLEMESNKQRLPFERAHVLVPSLGLYTRCCSSSTTFEKDYRCFMGTWVREGGEEGGLKSPMGMEERKAHAVAR----KMDQMRTRGKSFG 524
            YV GCFEGPEKTLEVCFKPGVGHARGCRELTR+QLDVLC++ARCTILNQ+SN YQDAYVLSESSLFVWPFKMMLKTCGTTTLLRCLPRLL+YTA LGLELEWVGYSRKNYSFPGDQ FPHSSFDQEL+YL+SHSKLSAKLNGSGYVLGPVTGDHFYVYVADQCVRPSYECHDRVLNIMMFDMDP+AA+VFYK   G  DAKEMTQKSGIADLVPGA IDAFAFDPCGYSMNAITYGNYATIHVTPEA+CSYASFETNTPLKSYDSLINNVLRVFRPRRFVLTMMAD  AVLEMESNKQRLPFERAHV VP LG Y+R  SS+T FEKDYRCFMGTW+RE G  G      G E +   A  R    +    R RG SFG
Sbjct:  124 YVPGCFEGPEKTLEVCFKPGVGHARGCRELTRRQLDVLCRKARCTILNQMSNAYQDAYVLSESSLFVWPFKMMLKTCGTTTLLRCLPRLLRYTAALGLELEWVGYSRKNYSFPGDQAFPHSSFDQELSYLRSHSKLSAKLNGSGYVLGPVTGDHFYVYVADQCVRPSYECHDRVLNIMMFDMDPEAAAVFYKEQSG--DAKEMTQKSGIADLVPGASIDAFAFDPCGYSMNAITYGNYATIHVTPEADCSYASFETNTPLKSYDSLINNVLRVFRPRRFVLTMMADQAAVLEMESNKQRLPFERAHVAVPGLGAYSRASSSTTIFEKDYRCFMGTWLREQGAGGAGAQRKGAEVKPGLAGGRPAGLERYPYRPRGVSFG 500          
BLAST of NO29G00960 vs. NCBI_GenBank
Match: CBJ28070.1 (S-Adenosylmethionine decarboxylase [Ectocarpus siliculosus])

HSP 1 Score: 428.7 bits (1101), Expect = 2.600e-116
Identity = 210/340 (61.76%), Postives = 254/340 (74.71%), Query Frame = 0
Query:  147 REYVAGCFEGPEKTLEVCFKPGVGHARGCRELTRKQLDVLCKQARCTILNQISNQYQDAYVLSESSLFVWPFKMMLKTCGTTTLLRCLPRLLKYT-ALLGLELEWVGYSRKNYSFPGDQFFPHSSFDQELAYLKSHSKLSAKLNGSGYVLGPVTGDHFYVYVADQCVRPSYECHDRVLNIMMFDMDPDAASVFYKGTGGARDAKEMTQKSGIADLVPGAQIDAFAFDPCGYSMNAITYGNYATIHVTPEAECSYASFETNTPLKSYDSLINNVLRVFRPRRFVLTMMADDGAVLEMESNKQRLPFERAHVLVP-SLGLYTRCCSSSTTFEKDYRCFMGTW 485
            REY  GCFEGPEKTLEVCFKPG+G+ +GCR LTR+ LD +C +A+CTIL+QISN Y DAYVLSESSLFV+P K+++KTCGTTTLLRC+  LL+      GL LEW+GYSRKN++FP DQ FPHSSF+QEL YL++H+ L  +LNG+GYVLGPVTGDH++VY+AD+C RP Y   DR +N+MMFDM PD A  FYK        +EMT+K+GIA+LVPGA +D FAFDPCGYSMNAI Y +Y TIHVTPE  CSYASFETN P KSY S+INNVL VFRP+R+VLTM+AD   +  +  N    PF+   + +P     Y R    ST  E D  C MG W
Sbjct:   75 REY-TGCFEGPEKTLEVCFKPGIGNPQGCRALTRQSLDRMCSRAKCTILHQISNDYLDAYVLSESSLFVYPHKVVMKTCGTTTLLRCVATLLQAALEQQGLVLEWMGYSRKNFTFPSDQLFPHSSFEQELQYLRAHTHLEKRLNGAGYVLGPVTGDHWFVYIADKCDRPDYTATDRTINMMMFDMHPDTAKHFYK--EACPTGREMTKKTGIAELVPGAVVDDFAFDPCGYSMNAILYDSYYTIHVTPEESCSYASFETNNPFKSYRSIINNVLNVFRPKRWVLTMVADKAGLNTITEN----PFDVEKIELPLRKAQYIRTSVCSTVVEGDCVCIMGAW 407          
BLAST of NO29G00960 vs. NCBI_GenBank
Match: GAX19122.1 (S-adenosylmethionine decarboxylase [Fistulifera solaris])

HSP 1 Score: 363.2 bits (931), Expect = 1.300e-96
Identity = 196/378 (51.85%), Postives = 248/378 (65.61%), Query Frame = 0
Query:  147 REYVAGCFEGPEKTLEVCFK--------PGVGHAR----------GCRELTRKQLDVLCKQARCTILNQISNQYQDAYVLSESSLFVWPFKMMLKTCGTTTLLRCLPRLLKYTALLGLELEWVGYSRKNYSFPGDQFFPHSSFDQELAYLKSHSKLSAKLNGSGYVLGPVTGDHFYVYVADQCVR-PSYECH-DRVLNIMMFDMDPDAASVFYKGTGGARD------------AKEMTQKSGIADLVPGAQIDAFAFDPCGYSMNAITYGNYATIHVTPEAECSYASFETNTPLKSYDSLINNVLRVFRPRRFVLTMMADDGAVLEMESNKQRLPFERAHVLVP--SLGL---YTRCCSSSTTFEKDYRCFMGTWVRE 488
            R+Y  G FEGPEKTLEV F+           G             G R LTR+QLD +C +ARCTIL+ ISNQY DAYVLSESSLFV+P+ ++LKTCGTTTLLRC+  L+     LGLE++WVGYSRKN++FPGDQ FPH SF QEL YL SH  L  +L+GSGY LGPVTGDH++V+VADQ +R  + +C  DRVLNIMMFD+D   A +FY       D            A   T+ +GI  L PGA ID+ AF+PCGYSMNA+ + +Y+T+H+TPEA  SYASFETN  + SY SLI+NV+R FRP+RFV+T+MAD+G + ++  N        A ++VP    G+   Y R  ++S   E+D  C MG WV E
Sbjct:   43 RDY-TGMFEGPEKTLEVVFRRVSDEYTDASTGDLTPMQTPPNTKLGLRNLTREQLDRICARARCTILSCISNQYLDAYVLSESSLFVYPYMLVLKTCGTTTLLRCIATLIDLGRTLGLEIDWVGYSRKNFNFPGDQSFPHQSFHQELDYLYSHRNLCERLDGSGYTLGPVTGDHWFVFVADQTLRSKALDCDTDRVLNIMMFDIDEQVAELFYYNRYQESDDEPIAENDMKRIAAAQTKAAGIDSLCPGALIDSAAFEPCGYSMNAVLFRSYSTMHITPEAGSSYASFETNQKVSSYKSLISNVIRTFRPKRFVMTLMADEGGLQQITENPLTDNASAAKIVVPFEKSGMKCSYKRASTASIKVEEDCCCLMGNWVLE 419          
BLAST of NO29G00960 vs. NCBI_GenBank
Match: GAX15592.1 (S-adenosylmethionine decarboxylase [Fistulifera solaris])

HSP 1 Score: 361.7 bits (927), Expect = 3.900e-96
Identity = 195/378 (51.59%), Postives = 247/378 (65.34%), Query Frame = 0
Query:  147 REYVAGCFEGPEKTLEVCFK--------PGVGHAR----------GCRELTRKQLDVLCKQARCTILNQISNQYQDAYVLSESSLFVWPFKMMLKTCGTTTLLRCLPRLLKYTALLGLELEWVGYSRKNYSFPGDQFFPHSSFDQELAYLKSHSKLSAKLNGSGYVLGPVTGDHFYVYVADQCVR-PSYECH-DRVLNIMMFDMDPDAASVFYKGTGGARD------------AKEMTQKSGIADLVPGAQIDAFAFDPCGYSMNAITYGNYATIHVTPEAECSYASFETNTPLKSYDSLINNVLRVFRPRRFVLTMMADDGAVLEMESNKQRLPFERAHVLVP--SLGL---YTRCCSSSTTFEKDYRCFMGTWVRE 488
            R+Y  G FEGPEKTLEV F+           G             G R LTR+QLD +C +ARCTIL+ ISNQY DAYVLSESSLFV+P+ ++LKTCGTTTLLRC+  L+     LGLE++WVGYSRKN++FPGDQ FPH SF QEL YL SH  L  +L+GSGY LGPVTGDH++V+VADQ +R  + +C  DRVLNIMMFD+D   A +FY       D            A   T+ +GI  L PGA ID+ AF+PCGYSMNA+ + +Y+T+H+TPE   SYASFETN  + SY SLI+NV+R FRP+RFV+T+MAD+G + ++  N        A ++VP    G+   Y R  ++S   E+D  C MG WV E
Sbjct:   43 RDY-TGMFEGPEKTLEVVFRRVSDEYTDASTGDLTPMQTPPNTKLGLRNLTREQLDRICARARCTILSCISNQYLDAYVLSESSLFVYPYMLVLKTCGTTTLLRCIATLIDLGRTLGLEIDWVGYSRKNFNFPGDQSFPHQSFHQELDYLYSHRNLCERLDGSGYTLGPVTGDHWFVFVADQTLRSKALDCDTDRVLNIMMFDIDEQVAELFYYNRYQESDDEPIAENDMKRIAAAQTKAAGIDSLCPGALIDSAAFEPCGYSMNAVLFRSYSTMHITPETGSSYASFETNQKVSSYKSLISNVIRTFRPKRFVMTLMADEGGLQQITENPLTDNASAAKIVVPFEKSGMKCSYKRASTASIKVEEDCCCLMGNWVLE 419          
BLAST of NO29G00960 vs. NCBI_GenBank
Match: XP_009034111.1 (hypothetical protein AURANDRAFT_21325 [Aureococcus anophagefferens] >EGB11777.1 hypothetical protein AURANDRAFT_21325 [Aureococcus anophagefferens])

HSP 1 Score: 353.2 bits (905), Expect = 1.400e-93
Identity = 184/345 (53.33%), Postives = 231/345 (66.96%), Query Frame = 0
Query:  152 GCFEGPEKTLEVCFKPGVGHARGCRELTRKQLDVLCKQARCTILNQISNQYQDAYVLSESSLFVWPFKMMLKTCGTTTLLRCLPRLLKYTAL------LGLELEWVGYSRKNYSFPGDQFFPHSSFDQELAYLKSHSKLSAKLNGSGYVLGPVTGDHFYVYVADQCVRPSYECHDRVLNIMMFDMDPDAASVFYKGTGGARD----AKEMTQKSGIADLVP-GAQIDAFAFDPCGYSMNAITYGNYATIHVTPEAECSYASFETNTPLKSYDSLINNVLRVFRPRRFVLTMMADDGAVLEMESNKQRLPFERAHVL-VPSLGLYTRCCSSSTTFEKDYRCFMGTW 485
            G FEGPEKTLEVCF PGVG  RGCR+LTR QLD +  +ARCTIL+ ISN + DAYVLSESSLFV+PFK+++KTCG TTLLRC+  L+           LGL+LEWVGYSRKNY+FP +Q  PH+SF +ELAYL++H          GYVLGP+TGDH++VYVADQC RP+    +R +NIMMFD+  D    FY   G   D    A+ MT +SG+  L+P  + +D  AF PCGYSMNA+ + +Y T+HVTPEA CSYASFETNT LK Y SL+ NVL VF+P++ VLT+ AD+  + E+    +   F+    L +  LG Y R   S    E D  C M  +
Sbjct:   11 GVFEGPEKTLEVCFLPGVGRERGCRDLTRAQLDTMLTEARCTILSHISNAHLDAYVLSESSLFVYPFKVVIKTCGRTTLLRCVRPLVDAATKAAEFGGLGLKLEWVGYSRKNYAFPDEQPSPHTSFGEELAYLRAHR--------DGYVLGPITGDHWFVYVADQCERPAASATERTINIMMFDLGEDVRDAFYLKPGEKGDLRSAARAMTARSGLGALIPSSSHLDDHAFAPCGYSMNALCFESYTTVHVTPEASCSYASFETNTALKGYASLVKNVLAVFKPKKVVLTLFADEAGLAEL---PKHATFDGLPKLDINPLGTYHRNDLSLLHVEHDCVCMMANY 344          
BLAST of NO29G00960 vs. NCBI_GenBank
Match: XP_002177188.1 (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >EEC51651.1 predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 335.5 bits (859), Expect = 3.000e-88
Identity = 174/319 (54.55%), Postives = 216/319 (67.71%), Query Frame = 0
Query:  152 GCFEGPEKTLEVCFK--------------PGVGHAR------GCRELTRKQLDVLCKQARCTILNQISNQYQDAYVLSESSLFVWPFKMMLKTCGTTTLLRCLPRLLKYTALLGLELEWVGYSRKNYSFPGDQFFPHSSFDQELAYLKSHSKLSAKLNGSGYVLGPVTGDHFYVYVADQCVRPSY--ECHDRVLNIMMFDMDPDAASVFY------------KGTGGARDAKEMTQKSGIADLVPGAQIDAFAFDPCGYSMNAITYGNYATIHVTPEAECSYASFETNTPLKSYDSLINNVLRVFRPRRFVLTMMADDG 437
            G FEGPEKTLEV F+               G   +       G R L R  LDV+C +ARCTIL+ ISNQY DAYVLSESSLF++P+ ++LKTCGTTTLLRC+  L+     LGLE++WVGYSRKN++FPGDQ FPH SF QEL YL  H  L  +L+GSGY LGPVTGDH++V+VADQ +R        DRVLNIMMFD+D +   +FY            K     R ++E T  SGI  L PGA ID  AF+PCGYSMNA+ + +Y+TIH+TPE+  SYASFETN  + SY +LI+NV+R FRP+RFV+T+MAD+G
Sbjct:    4 GMFEGPEKTLEVVFRRDSDEHTDLSMGELSGTSSSNAPILRTGLRRLDRSDLDVVCARARCTILSSISNQYLDAYVLSESSLFIYPYMLVLKTCGTTTLLRCIATLIDLGRKLGLEIDWVGYSRKNFNFPGDQAFPHQSFHQELDYLYGHRNLCERLDGSGYTLGPVTGDHWFVFVADQTIRAKALDIDTDRVLNIMMFDIDENVTQLFYYDQYEQHLDGETKDDAVKRISEEQTSVSGIRSLCPGAIIDPRAFEPCGYSMNAVLFRSYSTIHITPESGSSYASFETNQKVGSYKALISNVIRTFRPKRFVMTLMADEG 322          
BLAST of NO29G00960 vs. NCBI_GenBank
Match: OEU18640.1 (S-adenosylmethionine decarboxylase [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 334.0 bits (855), Expect = 8.600e-88
Identity = 180/326 (55.21%), Postives = 223/326 (68.40%), Query Frame = 0
Query:  147 REYVAGCFEGPEKTLEVCFKP------------GVGHAR------------GCRELTRKQLDVLCKQARCTILNQISNQYQDAYVLSESSLFVWPFKMMLKTCGTTTLLRCLPRLLKYTALLGLELEWVGYSRKNYSFPGDQFFPHSSFDQELAYLKSHSKLSAKLNGSGYVLGPVTGDHFYVYVADQCVR-PSYECH-DRVLNIMMFDMDPDAASVFYKGT-----GGARD------AKEMTQKSGIADLVPGAQIDAFAFDPCGYSMNAITYGNYATIHVTPEAECSYASFETNTPLKSYDSLINNVLRVFRPRRFVLTMMADD 436
            REY  G FEGPEKTLEV F+              VG A             G R L R  LD +C +ARCTIL+ +SN Y DAYVLSESSLFV+P+ ++LKTCGTTTLLRC+  L+     LGLE++WVGYSRKN+++PGDQ FPH SF QEL YL SH  L  +L+GSGY LGPVT DH++V+VAD  +R  S E   DRVLNIMMFD+D D +S+FY        G ++D      +K+ + KSGI DL PG+ ID  AF+PCGYSMNAI + +Y+TIH+TPE+  SY SFETN  + SY SLI+NV+R FRP+RFV+T+MADD
Sbjct:   43 REY-TGVFEGPEKTLEVVFRKEGTEGLPTIFPVPVGGASGTTTAEASTRNIGLRRLGRDDLDQICARARCTILSSVSNNYLDAYVLSESSLFVYPYMVVLKTCGTTTLLRCIAILIDLGHKLGLEIDWVGYSRKNFNYPGDQAFPHQSFHQELDYLYSHRNLCDRLDGSGYTLGPVTADHWFVFVADHTIRSQSLEIDTDRVLNIMMFDIDEDVSSLFYYNNYDTIEGESKDDEIKRISKQQSAKSGINDLCPGSIIDPRAFEPCGYSMNAILFRSYSTIHITPESGSSYVSFETNQKVASYKSLISNVIRTFRPKRFVMTLMADD 367          
BLAST of NO29G00960 vs. NCBI_GenBank
Match: CBJ32442.1 (S-Adenosylmethionine decarboxylase [Ectocarpus siliculosus])

HSP 1 Score: 320.9 bits (821), Expect = 7.600e-84
Identity = 158/340 (46.47%), Postives = 221/340 (65.00%), Query Frame = 0
Query:  154 FEGPEKTLEVCFKPGVGHARGCRELTRKQLDVLCKQARCTILNQISNQYQDAYVLSESSLFVWPFKMMLKTCGTTTLLRCLPRLLKYTALLGLELEWVGYSRKNYSFPGDQFFPHSSFDQELAYLKSHSKLSAKLNGSGYVLGPVTGDHFYVYVADQCVRPSYECHDRVLNIMMFDMDPDAASVFYKGTGGARDAKEMTQKSGIADLVPGAQIDAFAFDPCGYSMNAITYGNYATIHVTPEAECSYASFETNTPLKSYDSLINNVLRVFRPRRFVLTMMADDGAVLEMESNKQRLPFERAHVLV------PSLGLYTRCCSSSTTFEKDYRCFMGTWVRE 488
            FEGPEKTLE+ F+P VGH  G R + R+Q D + +QA+C IL+Q  N + D+YVLSESSLFV+  K++LKTCGTTTLLRCLP L   +   GL LEW+GYSRKN++FP DQ +PH+SF +E+ +L+         +GS YV GP+  DH+Y YVAD C + +    DR LN+MM+D++P+ A  FYK T   +  ++++ +SGI  ++P A +    F+PCGYSMNA+    Y T+HVTPE + SYASFETN  L  YD+L+  VL VFRPR+F +T+  +D  + +++ +    PF+ + +         +   Y R   ++T F  DY   MG WVRE
Sbjct:   50 FEGPEKTLEIEFEPDVGHEEGLRAIRREQWDAILEQAQCHILHQRGNDHFDSYVLSESSLFVYKSKLVLKTCGTTTLLRCLPLLTVVSKNYGLNLEWIGYSRKNFTFPTDQTYPHTSFAEEVDFLQ------GMFSGSAYVHGPLNSDHWYTYVADDCKKSTNAAADRTLNMMMYDLEPEVAQNFYK-TDKIQTGEDVSSRSGIKSVLPNAALQDHLFEPCGYSMNALEGQAYYTVHVTPEPDFSYASFETNVRLPDYDALVRGVLEVFRPRKFTMTLFGEDSGIEDIKQS----PFDYSDIACGPTSASSTSARYERTLKTTTNFSGDYFSQMGNWVRE 378          
BLAST of NO29G00960 vs. NCBI_GenBank
Match: EJK52003.1 (hypothetical protein THAOC_28771 [Thalassiosira oceanica])

HSP 1 Score: 318.5 bits (815), Expect = 3.800e-83
Identity = 191/454 (42.07%), Postives = 248/454 (54.63%), Query Frame = 0
Query:  147 REYVAGCFEGPEKTLEVCFKPGVGHA------------------------RGCRELTRKQLDVLCKQARCTILNQISNQYQDAYVLSESSLFVWPFKMMLKTCGTTT-------------------LLRCLPRLLKYTALLGLELEWVGYSRKNYSFPGDQFFPHSSFDQELAYLKSHSKLSAKLNGSGYVLGPVTGDHFYVYVADQCVRPSYE--------------CH---------DRVLNIMMFDMDPDAASVFYKGTGGARD-------------AKEMTQKSGIADLVPGAQIDAFAFDPCGYSMNAITYGNYATIHVTPEAECSYASFETNTPLKSYDSLINNVLRVFRPRRFVLTMMADDGAVLEMESNKQ----------RLPFERAHVLVPSLG-----------------LYTRCCSSSTTFEKDYRCFMGTWV-REGGEEGG 494
            REY  G FEGPEKTLEV F+    H                          G R L R  LD +C +ARCTIL+ +SN++ DAYVLSESSLFV+P+ ++LKTCGTT+                   LLRC+  L++    LGLE++W+GY+RKN+SFP DQ FPH SF QE+ YL SH  L  +L+G+GY LGPVTGDH++V+VAD+  R S+E              C          DRVLN+MMFD+D D A  FY     AR              + E T+ +GI +LVPGA ID  AF+PCGYSMNA+ + +Y+T+H+TPE   SYASFETN  +K+Y  LI+NV+R FRP+RFV+T+MAD+  + EM  N             +P  +      ++G                  Y R   +S   E D  CFMG WV  +GGE  G
Sbjct:   45 REY-NGLFEGPEKTLEVMFRKIAPHGIQEPYPADDLSVGSIASAEQPIRRVGLRTLERTDLDRICARARCTILSCVSNRFLDAYVLSESSLFVYPYMIVLKTCGTTSELCHNPNSISNSKNIATPALLRCVATLIELGHKLGLEIDWLGYNRKNFSFPSDQMFPHGSFHQEMEYLYSHRNLCERLDGNGYTLGPVTGDHWFVFVADKTKRASWETDTGKTGFSLNFLVCQMPIHLHRLADRVLNLMMFDIDEDVARKFYYDQYEARTGPDETDDEAILRISGEQTKAAGIDELVPGATIDPRAFEPCGYSMNAVLFHSYSTMHITPEEGSSYASFETNQKVKNYIPLISNVVRAFRPKRFVVTLMADEFGLKEMGKNPLFMGSARGATIEVPIAKFKATAAAIGSPTPPAVASASFCGKKASYKRSNVASIQVEDDVCCFMGNWVLADGGECDG 497          
BLAST of NO29G00960 vs. NCBI_GenBank
Match: ETL44125.1 (S-adenosylmethionine decarboxylase proenzyme [Phytophthora parasitica])

HSP 1 Score: 316.6 bits (810), Expect = 1.400e-82
Identity = 164/350 (46.86%), Postives = 219/350 (62.57%), Query Frame = 0
Query:  150 VAGCFEGPEKTLEVCFKPGVGHARGCRELTRKQLDVLCKQARCTILNQISNQYQDAYVLSESSLFVWPFKMMLKTCGTTTLLRCLPRLLKYTALLGLELEWVGYSRKNYSFPGDQFFPHSSFDQELAYLKSHSKLSAKLNGSGYVLGPVTGDHFYVYVADQCVR------------PSYECHDRVLNIMMFDMDPDAASVFYKGTGGARDAKEMTQKSGIADLVPGAQIDAFAFDPCGYSMNAITYGNYATIHVTPEAECSYASFETNTPLKSYDSLINNVLRVFRPRRFVLTMMADDGAVLEMESNKQRLPFERAHVLVPSLGLYTRCCS-SSTTFEKDYRCFMGTWVR 487
            V   FEGPEK LE+ FK GVGH RG RE+TR  LD + +  +C IL++ SN++ DAYVLSESS+F++  K++LKTCGTTTLL+CLP +  ++  LGLE+EWV YSRKNY+FP +Q +PH+SF  E+A+L S+       +GS +VLGP+  DH+Y+Y  D  +                  ++  L ++M DM P  A  F+K       ++ MT +SGI DLVPGA ID FAFDPCGYSMN I +  Y TIH+TPE+ CSY SFETN  L+SY SL+ NVLR FRP ++ +++  D  A   +ES K    F    V +    LY R    +  TFE DY C M  + +
Sbjct:   27 VPNTFEGPEKNLEIDFKLGVGHERGLREVTRNDLDEMLEAGQCQILSRTSNEHIDAYVLSESSMFIYAHKIVLKTCGTTTLLKCLPYIKTFSERLGLEIEWVNYSRKNYTFPEEQKYPHTSFQTEVAFLSSYFP-----DGSAHVLGPLNHDHWYIYAWDADIHEQPGALTCNPDLKEPRANESTLQVLMQDMHPSVAKQFFKNNDSTMTSRRMTIESGIRDLVPGAVIDDFAFDPCGYSMNGILFDAYYTIHITPESHCSYVSFETNARLRSYASLLKNVLRCFRPAKYSVSVYTDRNA---LESAKGNNMFAEDMVKIDDDLLYKRKGGHTQATFEGDYMCRMANYAQ 368          
The following BLAST results are available for this feature:
BLAST of NO29G00960 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM21312.11.900e-18384.43s-adenosylmethionine decarboxylase [Nannochloropsi... [more]
CBJ28070.12.600e-11661.76S-Adenosylmethionine decarboxylase [Ectocarpus sil... [more]
GAX19122.11.300e-9651.85S-adenosylmethionine decarboxylase [Fistulifera so... [more]
GAX15592.13.900e-9651.59S-adenosylmethionine decarboxylase [Fistulifera so... [more]
XP_009034111.11.400e-9353.33hypothetical protein AURANDRAFT_21325 [Aureococcus... [more]
XP_002177188.13.000e-8854.55predicted protein, partial [Phaeodactylum tricornu... [more]
OEU18640.18.600e-8855.21S-adenosylmethionine decarboxylase [Fragilariopsis... [more]
CBJ32442.17.600e-8446.47S-Adenosylmethionine decarboxylase [Ectocarpus sil... [more]
EJK52003.13.800e-8342.07hypothetical protein THAOC_28771 [Thalassiosira oc... [more]
ETL44125.11.400e-8246.86S-adenosylmethionine decarboxylase proenzyme [Phyt... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL061nonsL061Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR038ncniR038Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR081ngnoR081Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005216NSK005216Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO29G00960.1NO29G00960.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|546003gene_8268Nannochloropsis oceanica (N. oceanica CCMP1779)gene
SAMDCgene9110Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO29G00960.1NO29G00960.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO29G00960 ID=NO29G00960|Name=NO29G00960|organism=Nannochloropsis oceanica|type=gene|length=4019bp
AAACACAGGCAAAGACTTCGTCTTCGTCTGCCCCTCCCCGCCGCGAGCCC
CCAAGCTAGCCGCGGACCCGCACAACAACCTCGCATCTTTTGTTGCCCTA
GGATCGAGATCGACTCCTAGCCGGCACCCTTTTAAATAAAGTTACAAGCC
AGACCCTTTTCTGCGACAGAAAAGGCTGCCCCCAAGTGAGAACTGGGTGC
TGCCACTGTCTAACGAGACCGCTTCATGCATACGCAAAAGAGCGTGCTTC
AAGACCTGAAGgtgcgtcctagttatgggtggggaagaacaggagaagga
agaggacataggagaaagagtgtgccccttggttcttgtgtcagtcccat
acaccggcattgcttcctccagtctttcgtgtgtctatctatacagactt
ttatgtcctatgtcttcctccgtcccgggatcagtctgccttgctctgcc
ggatcaaaaaaaaagatgaccctcctttctcacgcattccctccttcctt
cccttcgtcttacgaattatcagGTGGAAGATATCGTCAACACGGCGAAC
ATTTTCAAAGGCGTATCTTACTTCAAGACGTGCGAGGAACCCGCCTGACA
GGCCTACTACCACAACAGCAAGAGCAAGAGCAGCAACAGCAGAAGCAGTA
GTTAGAGAGACAGAGTATAAACAGAGAGAGAACATAATTAAGTGTAACAT
TTTTATCACAGAAGAAGGAGACGATATAATTAATTAGAATCAAAGCAGTC
CAATTACGATAACGATAACGTTATCAACGGAAGAAACGCCCTAAAAAATT
GAAGAGAGGAGAAACCTATTCCTCCTGTTTCTCCGCCAAAAAAACTACAC
CAAGAGAAACCCACATGGCCAAGGAGGGAGTGAACCCCGTGGCTGCGGCA
GCTGCAGCCGCCATTGTTGCCGCTGTGCAGCAGCAGCAGGATACCAACAA
GAGCACAATTAGCACTAAAAATATTTCGGGTGAAGCGGTCGCAGCCTTGG
CGAGTGACGACAGCAGCAGCAGCACCACCACCACCTTGCTTACCCATCTT
TCGGTCGCCGATGATAGCAGCAGCAGCTGTAACAGCAACAGCAGAAGCAG
CGAGACAAACAGCGCAGCTTCCGTCTGTAGTGGCAGTAGCAGCAATGGGG
ACACTGAAACAGAGGAAGGGATGGAGGAAGAGCACCCTCACCACTCCGGC
AGCCGCTCTCACATGTCCGCGTCCTCGGACTGCGGCACGTCTTCTGGAGA
CGAAGGTCCACTCGAGGAAGAGGAAGAGGAAGAAGAGGAGGAAGAGGAAG
GGAGGGAGTATGTGGCTGGGTGTTTTGAAGGCCCGGAGAAGACGCTGGAG
GTCTGCTTCAAACCTGGGGTGGGTCACGCCCGGGGCTGCCGGGAACTGAC
CCGTAAGCAGCTGGACGTCCTCTGCAAACAGGCGCGGTGCACTATCCTCA
ATCAAATCTCGAATCAGTATCAGgtatgtacatgaccgggggtcgggttg
cttccttcttatatccggttgttgttccctccctttctctcttttccact
ccccccatttctccctcgctttcttttttctgacccttctccttatcgac
agctgccatctaggggtatcttgccagtcaaatatcaaatacgtttttcg
ctgttaaatttgtattcacctgtccctcccttcctccctccctccctcct
actcccctccactcagGATGCCTACGTGTTGTCCGAGTCATCGCTCTTCG
TCTGGCCCTTCAAGATGATGCTCAAGACTTGCGGCACCACCACCCTCCTT
CGCTGCCTCCCTCGGCTTCTCAAGTACACGGCCTTGCTGGGCCTCGAGCT
CGAATGGGTGGGCTATAGCCGCAAGAACTACTCTTTTCCGGgtatggctt
tggggtgttttccatctagtcctccctccgtctctccctccccctctctt
tgtccccctatgtccttccctttcgcctctccaactgaaagcatttcgct
caggggttaaaatctaagtaatataacaccattacactcataacactcaa
tacaatcagGGGATCAGTTCTTCCCCCACTCGTCTTTCGACCAAGAGCTA
GCCTACCTCAAGAGCCACTCCAAGCTATCTGCCAAGCTTAACGGTTCCGG
TTACGTCCTCGGGCCCGTTACGGGCGACCATTTCTATGTTTATGTCGCTG
ATCAATGCGTGCGTCCCTCGTACGAATGTCACGACCGAGTGCTAAACATC
ATGATGTTCGATATGgtccgtcttgccctccctcccttcgtcttgccctc
cctccctcccttcttccttcttgccttcccaccagcgtcccctgtggacg
tcactggccagtccatgcatccttctcacgaaagtcatcttcttgtcccc
tccctccctcccccccccccttccttcagGACCCGGACGCCGCCTCTGTC
TTCTACAAAGGCACTGGCGGTGCACGTGATGCCAAGGAAATGACCCAGAA
AAGTGGAATCGCGGATCTGGTTCCCGGGGCTCAGATTGATGCTTTTGCCT
TCGACCCATGCGGGTACTCGATGAATGCGATCACGTACGGGAATTACGCC
ACCATCCACGgtacgcccctccccttccctctggcccatgcactgaatcc
tctacgcaccctcccccttcccttttatttttttttggtggtctccgaaa
ccaaaaccattagcggaggtttttaatttaatttcttactttttgaactg
gctagaggaaagggaggagggggaggcacgttcacgtctcgttcctcaac
acaaccaccctccgttcctcaacacaaccaccctccgaaagcagggtgtc
tttattgccacttcgcttttagaaagggaagggctttaattcctgctgac
tgtagctggcgccttacccataattttatctttgtaatgaatcactttct
cccttaccagaactcgcatacactcacgcgtaaacattaaccgacagTGA
CGCCCGAGGCCGAATGTTCTTACGCTTCCTTCGAGACCAACACTCCCCTC
AAGAGTTACGACTCCTTGATCAATAACGTCCTCCGTGTCTTCCGTCCTCG
CCGTTTCGTCCTCACCATGATGGCCGACGACGGTGCTGTGCTCGAGATGG
AAAGCAACAAGCAACGCCTCCCCTTCGAGCGTGCCCATGTCCTCGTTCCC
TCCCTTGGGCTCTACACCCGCTGCTGCTCCTCCTCCACCACGTTTGAGAA
GGACTACCGTTGTTTCATGGGTACTTGGGTAAGGGAGGGAGGGGAGGAGG
GAGGGTTGAAATCACCGATGGGGATGGAGGAGAGGAAGGCGCATGCGGTG
GCGAGGAAGATGGATCAGATGCGGACAAGGGGTAAATCGTTCGGCTAGAG
GTAGAAGGAGGAAGGGGGGAAGGAATTGAGCGAGAGGATGATGTTGAGTA
ATTTTTTTGGGGGGCATTGGGAAATGGACGTACACCGGATTATTATATAA
GCTAGGCGTGGTCAGACGAGAACTCTGTCAGCAGCAGGAATAGCAGCAGC
AGAGACAGTGGGAATTGCAGTAGCAGTGGCAGCAGCAGCAGGAGCAGCAT
TTTCAAAAGCAGCAAAAGCAGCCAAAGCAGTATTAGTCCAGCGACGCTTA
ATTTGTTATACTTAAGGTAGAGAGAGGTCGAGCGAGATGGGGAAACCACA
AGCATAAAGAAACGAGGTGTGAAAGAATAGAGTGAAAGCGGTAGAATGCC
GATTCTGCGTTCTTGACACGACATTCTCCCAACAAAAAAAAATCATACTA
TGGGGAGGGAAGAAAAACAAGAATTGGTAGAGGGAAGGAAGCAGGGAGGC
AGGAAAGAGAACTATTAATACCGCTTCCTAACCGAAAAGAGATTAAGGAA
GCACGCAGAAGCCAGAATCGCAACAAAAAGAGAAAAGAAAAGAGGAGGGT
AATAGGATCATCAGACCTTCCAAAACCCTTACTGACCGATCAGTACCGCT
TATTTTTCCTCTATCGCTG
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protein sequence of NO29G00960.1

>NO29G00960.1-protein ID=NO29G00960.1-protein|Name=NO29G00960.1|organism=Nannochloropsis oceanica|type=polypeptide|length=524bp
MAKEGVNPVAAAAAAAIVAAVQQQQDTNKSTISTKNISGEAVAALASDDS
SSSTTTTLLTHLSVADDSSSSCNSNSRSSETNSAASVCSGSSSNGDTETE
EGMEEEHPHHSGSRSHMSASSDCGTSSGDEGPLEEEEEEEEEEEEGREYV
AGCFEGPEKTLEVCFKPGVGHARGCRELTRKQLDVLCKQARCTILNQISN
QYQDAYVLSESSLFVWPFKMMLKTCGTTTLLRCLPRLLKYTALLGLELEW
VGYSRKNYSFPGDQFFPHSSFDQELAYLKSHSKLSAKLNGSGYVLGPVTG
DHFYVYVADQCVRPSYECHDRVLNIMMFDMDPDAASVFYKGTGGARDAKE
MTQKSGIADLVPGAQIDAFAFDPCGYSMNAITYGNYATIHVTPEAECSYA
SFETNTPLKSYDSLINNVLRVFRPRRFVLTMMADDGAVLEMESNKQRLPF
ERAHVLVPSLGLYTRCCSSSTTFEKDYRCFMGTWVREGGEEGGLKSPMGM
EERKAHAVARKMDQMRTRGKSFG*
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Synonyms
Publications