jgi.p|Nanoce1779_2|546003, gene_8268 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|546003
Unique Namegene_8268
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_23:235577..239575 -

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Properties
Property NameValue
TranscriptId546089
ProteinId546003
Product nameS-adenosylmethionine decarboxylase
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_23supercontigscaffold_23:235577..239575 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004014adenosylmethionine decarboxylase activity
Vocabulary: Biological Process
TermDefinition
GO:0006597spermine biosynthetic process
GO:0008295spermidine biosynthetic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL038ncniL038Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO29G00960NO29G00960Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|546003mRNA_8268-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|546003mRNA_8268Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|546003

>mRNA_8268-protein ID=mRNA_8268-protein|Name=jgi.p|Nanoce1779_2|546003|organism=Nannochloropsis oceanica|type=polypeptide|length=524bp
MAKEGVNPVAAAAAAAIVAAVQQQQDTNKSTISTKNISGEAVAALASDDS
SSSTTTTLLTHLSVADDSSSSCNSNSRSSETNSAASVCSGSSSNGDTETE
EGMEEEHPHHSGSRSHMSASSDCGTSSGDEGPLEEEEEEEEEEEEGREYV
AGCFEGPEKTLEVCFKPGVGHARGCRELTRKQLDVLCKQARCTILNQISN
QYQDAYVLSESSLFVWPFKMMLKTCGTTTLLRCLPRLLKYTALLGLELEW
VGYSRKNYSFPGDQFFPHSSFDQELAYLKSHSKLSAKLNGSGYVLGPVTG
DHFYVYVADQCVRPSYECHDRVLNIMMFDMDPDAASVFYKGTGGARDAKE
MTQKSGIADLVPGAQIDAFAFDPCGYSMNAITYGNYATIHVTPEAECSYA
SFETNTPLKSYDSLINNVLRVFRPRRFVLTMMADDGAVLEMESNKQRLPF
ERAHVLVPSLGLYTRCCSSSTTFEKDYRCFMGTWVREGGEEGGLKSPMGM
EERKAHAVARKMDQMRTRGKSFG*
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Synonyms
Publications