NO29G00390, NO29G00390 (gene) Nannochloropsis oceanica

Overview
NameNO29G00390
Unique NameNO29G00390
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1932
Alignment locationchr29:159070..161001 -

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Properties
Property NameValue
DescriptionRan GTPase-activating protein 1
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr29genomechr29:159070..161001 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR001611Leu-rich_rpt
Homology
BLAST of NO29G00390 vs. NCBI_GenBank
Match: XP_002906326.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY65727.1 conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 162.9 bits (411), Expect = 2.700e-36
Identity = 131/395 (33.16%), Postives = 199/395 (50.38%), Query Frame = 0
Query:   82 KRVQLSNKSLSEEAAKVVADA-LRNLGEEIEHADISDIIAGKHEDEALRVLEIVSSSLAHQPLISINLSDNALGEKGLIACSSLLTAQPLLQSFFVCNNGLSATATATVASLLMYR----TPTLLRVLHFYNNMSGDEGLAVLGDAGGEEGERGVYQHAVGGSDGKGRXXXXXXXXXXXXXXLTGLKKVDLADNFFGGGEEGXTEGGLSVAGKLAEALGAQQGLEWLNLRDCGLEDTGVKAVLKSVSGKCRAVKRLDLSGNEMTRSCGKALGRAVARWGGREEGKGGLTHLYLEENELGSPGAKALAEGGGKGGLRRCGALLYLNLNYNEVGRTGAVAVVRALVEREGGWKGRGEGRKRMTRVEMEGNQVGEEGREQMRALLEREGLGIMLGPME 472
            K + L  KS ++  AKV+ADA L  L  +++  D++D+IAG+ EDEALRVL ++  +L    L  I+LSDNALGEKG+ AC  LL  QP L+    CNNG+SA A + +A  ++ +      + L   HFYNNMSG +G   + +   +  +  + ++A      +                L  LK +DL+D  F   E+G T+        LAEA+  Q  L++L LRD  L   G   V+K+++     +  LDLSGNE+      +L   +       + +  L  L L+ENE+ S G K        G L    AL  L+L  NE+   GA+AVV   V            R  + R+E++ N + ++G E ++A L ++G   +LG +E
Sbjct:  476 KSISLRGKSYTDSGAKVIADALLSRLQSDLKVVDLADVIAGRPEDEALRVLSVMCRALRGHGLDEIDLSDNALGEKGVRACFDLLIPQPTLRRLLFCNNGISAAAASVIAQEIVLQNGKDAQSTLEEFHFYNNMSGHDGCVAVANVLAQCKKLTLLRYA----SARAGPEASEQMARSVNTHLRDLKSLDLSDCSF--EEDGATQ--------LAEAISKQPSLQYLKLRDALLCAEGATKVVKALASSKIQLVELDLSGNELADDGIVSLAPLL-------KFQSQLKVLRLDENEVTSEGLKDFVAALSSGSL---PALEELSLCGNEITAKGAIAVVDTFVPT----------RTALARLELDTNMISDKGVEHIKASLAKQGKTTILGSLE 836          
BLAST of NO29G00390 vs. NCBI_GenBank
Match: XP_005713207.1 (unnamed protein product [Chondrus crispus] >CDF33404.1 unnamed protein product [Chondrus crispus])

HSP 1 Score: 151.8 bits (382), Expect = 6.100e-33
Identity = 145/438 (33.11%), Postives = 208/438 (47.49%), Query Frame = 0
Query:   30 ARENVDAARAAALVAESLDQLRLDLAKAADAAAVIETKDEENGXXXXKKGGCKRVQLSNKSLSEEAAKVVADALRNLGEEIEHADISDIIAGKHEDEALRVLEIVSSSLA-HQPLISINLSDNALGEKGLIACSSLLTAQPLLQSFFVCNNGLSATATATVASLLMYRTPTLLRVLHFYNNM---SGDEGLAVLGDAGGEEGERGVYQHAVGGSDGKGRXXXXXXXXXXXXXXLTGLKKVDLADNFFGGGEEGXTEGGLSVAGKLAEALGAQQGLEWLNLRDCGLEDTGVKAVLKSVSGKCRAVKRLDLSGNEMTRSCGKALGRAVARWGGREEGKGGLTHLYLEENELGSPGAKALAEGGGKGGLRRCGALLYLNLNYNEVGRTGAVAVVRALVEREGGWKGRGEGRKRMTRVEMEGNQVGEEGREQMRALL-EREG 463
            A  ++DA +  AL A   ++L  DL+                        G   V+LS  S  + +A V A+AL      +   D+SDIIA + EDEA R L +++ +L+    L S+NLSDNALG KG+ A  SLL  +  LQ   +CNNGL+A A   +AS ++   PT L+ LHF+NN+   +G   LA + D      E   +     G DG  R                 L+ ++L+DN F  GEEG        A  LA+ LG    LE L LRD  L D GV+AV K++      + +LD+SGNEM     + LG+ V+         G LT +  E+NELGS GA ALA       +     +  L+++ +E+G  GA+ +  A+ E EG           +  + M+ N +     EQ+  LL ER G
Sbjct:    9 AHFSIDATKREALTASRAEELLRDLS-----------------------AGITSVKLSGVSFGDGSAPVAAEALSRAAATLRDVDLSDIIASRPEDEAKRALTVIADALSICDALRSLNLSDNALGAKGIRALGSLLAGRAELQELLLCNNGLAADAGDLIASAVLETAPTKLKKLHFHNNLLETAGSVALAPIVD-NSPMLEDFRFSSLRLGRDGSVRICKALHPRLGET-----LRHLNLSDNTF--GEEG--------AEALADVLGDAAVLETLLLRDDALGDDGVQAVCKALVHGAPRLFKLDVSGNEMEAGAARQLGKLVS--------VGRLTEVLAEDNELGSSGACALAR-----EISEEARVEVLDVSSSEIGGRGALRLATAVQELEG-----------LKTLRMDANCIPRSVVEQVEELLGERLG 383          
BLAST of NO29G00390 vs. NCBI_GenBank
Match: XP_008869661.1 (hypothetical protein H310_06389, partial [Aphanomyces invadans] >ETW01813.1 hypothetical protein H310_06389, partial [Aphanomyces invadans])

HSP 1 Score: 148.7 bits (374), Expect = 5.200e-32
Identity = 144/437 (32.95%), Postives = 212/437 (48.51%), Query Frame = 0
Query:   46 SLDQLRLD-LAKAADAAAVIETKDEENGXXXXKKGGCKRVQLSNKSLSEEAAKVVADALRNLGEEIEHADISDIIAGKHEDEALRVLEIVSSSLAHQPLISINLSDNALGEKGLIACSSLLTAQPLLQSFFVCNNGLSATATATVASLLMYRTPTLLRVL---HFYNNMSGDEG-LAVLGDAGGEEGERGV-YQHAVGGSDGKGRXXXXXXXXXXXXXXLTGLKKVDLADNFFGGGEEGXTEGGLSVAGKLAEALGAQQGLEWLNLRDCGLEDTGVKAVLKSVSGKCRAVKRLDLSGNEMTRSCGKALGRAVARWGGREEGK-----GGLTHLYLEENELGSPGAKALAEGGGKGGLRRCGALLYLNLNYNEVGRTGAVAVVRALVEREGGWKGRGEGRKRMTRVEMEGNQVGEEGREQMRALLEREGLGIMLGPME 472
            +LD LR D + +  DAA   E      G     +     + L  KS +   A V+AD LR++   I+ AD++DIIAG+ EDEAL VL  +S SL    L  I+LSDNALGEKG+ AC  +L  Q  L+    CNNG+SA A+A +A  ++ +   + + L   HF+NNMSG +G LAV     G    +   +  A  G+                   L  L  +DL+D  F   +EG        A  LA A+  Q  L+ L LRD  L   G K ++ +++     +  LDLSGNE+           +   GG   G+      GL  L L+ENE+ S G   LA+    G L    AL  L+L  NE+  +GAVA  +A+ ++             +  ++++ N +   G  ++RA+L++ G G +LGPM+
Sbjct:  425 ALDVLRFDAVREVVDAARAKELLAPFQG-----RTTFHTISLRGKSYTHAGAAVIADYLRHI-RGIKVADLADIIAGRPEDEALVVLTTISKSLVGHVLDEIDLSDNALGEKGVRACFDVLIPQTTLKHLSFCNNGISAAASAVIAQEVVLQQAGVAKSLESFHFFNNMSGHDGCLAVAAMLSGCPNLKSFRFASARAGAAAS------LQLALSIGQHLRHLTSLDLSDCSF--DDEG--------AVALATAISKQTQLKVLKLRDASLGSKGAKLIVAALASAQIQLDSLDLSGNELEDQ------GLINMIGGGNSGRLLDSQVGLKVLRLDENEVTSKGLAVLAD-ALHGPLPWAAALEELSLYGNEITASGAVAAAKAVADKAS-----------LKLLQLDSNMISSVGLSKLRAILDQAGKGHVLGPMD 821          
BLAST of NO29G00390 vs. NCBI_GenBank
Match: KUF96663.1 (hypothetical protein AM588_10006275 [Phytophthora nicotianae])

HSP 1 Score: 146.4 bits (368), Expect = 2.600e-31
Identity = 123/397 (30.98%), Postives = 187/397 (47.10%), Query Frame = 0
Query:   82 KRVQLSNKSLSEEAAKVVADA-LRNLGEEIEHADISDIIAGKHEDEALRVLEIVSSSLAHQPLISINLSDNALGEKGLIACSSLLTAQPLLQSFFVCNNGLSATATATVASLLMYR----TPTLLRVLHFYNNMSGDEGLAVLGDAGGEEGERGVYQHAVGGSDGKGRXXXXXXXXXXXXXXLTGLKKVDLADNFFGGGEEGXTEGGLSVAGKLAEALGAQQGLEWLNLRDCGLEDTGVKAVLKSVSGKCRAVKRLDLSGNEMTRS--CGKALGRAVARWGGREEGKGGLTHLYLEENELGSPGAKALAEGGGKGGLRRCGALLYLNLNYNEVGRTGAVAVVRALVEREGGWKGRGEGRKRMTRVEMEGNQVGEEGREQMRALLEREGLGIMLGPME 472
            K + L  KS ++  AKV+AD+ L  L  +++  D++D+IAG+ EDEALRVL ++  +L    L  I+LSDNALGEKG+ AC  LL  QP L+    CNNG+SA A + +A  ++ +      + L   HFYNNMSG +G   + +   +  +  + ++A      +                L  LK +DL+D  F   E+G T+        LAEA+  Q  L++L LRD  L   GV+ V K+++     +  LDLSGNE+        AL                               A +L             AL  L+L  NE+   GA+AVV   V            +  + RVE++ N + ++G E ++A L ++G   +LG +E
Sbjct:  792 KSISLRGKSYTDSGAKVIADSFLSRLQSDLKVVDLADVIAGRPEDEALRVLSVMCHALRGHALDEIDLSDNALGEKGVRACFDLLIPQPTLRRLLFCNNGISAAAASVIAQEIVLQNGKDAQSTLEEFHFYNNMSGHDGCVAVANVLAQCKKLTLLRYA----SARAGPEASEEMARSVNTHLRQLKSLDLSDCSF--EEDGATQ--------LAEAISKQPNLQYLKLRDASLCAEGVEKVAKALTSSNIQLVELDLSGNELADEGIAALALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADSLP------------ALEELSLCGNEITAKGAIAVVDTFVPT----------KMALVRVELDTNMISDKGVEHIKASLAKQGKANILGSLE 1152          
BLAST of NO29G00390 vs. NCBI_GenBank
Match: ETI37564.1 (hypothetical protein F443_16512 [Phytophthora parasitica P1569] >KUF94700.1 RAN GTPase-activating protein 2 [Phytophthora nicotianae])

HSP 1 Score: 145.6 bits (366), Expect = 4.400e-31
Identity = 123/397 (30.98%), Postives = 186/397 (46.85%), Query Frame = 0
Query:   82 KRVQLSNKSLSEEAAKVVADA-LRNLGEEIEHADISDIIAGKHEDEALRVLEIVSSSLAHQPLISINLSDNALGEKGLIACSSLLTAQPLLQSFFVCNNGLSATATATVASLLMYR----TPTLLRVLHFYNNMSGDEGLAVLGDAGGEEGERGVYQHAVGGSDGKGRXXXXXXXXXXXXXXLTGLKKVDLADNFFGGGEEGXTEGGLSVAGKLAEALGAQQGLEWLNLRDCGLEDTGVKAVLKSVSGKCRAVKRLDLSGNEMTRS--CGKALGRAVARWGGREEGKGGLTHLYLEENELGSPGAKALAEGGGKGGLRRCGALLYLNLNYNEVGRTGAVAVVRALVEREGGWKGRGEGRKRMTRVEMEGNQVGEEGREQMRALLEREGLGIMLGPME 472
            K + L  KS ++  AKV+AD+ L  L  +++  D++D+IAG+ EDEALRVL ++  +L    L  I+LSDNALGEKG+ AC  LL  QP L+    CNNG+SA A + +A  ++ +      + L   HFYNNMSG +G   + +   +  +  + ++A      +                L  LK +DL+D  F   E+G T+        LAEA+  Q  L +L LRD  L   GV+ V K+++     +  LDLSGNE+        AL                               A +L             AL  L+L  NE+   GA+AVV   V            +  + RVE++ N + ++G E ++A L ++G   +LG +E
Sbjct:  473 KSISLRGKSYTDSGAKVIADSFLSRLQSDLKVVDLADVIAGRPEDEALRVLSVMCHALRGHALDEIDLSDNALGEKGVRACFDLLIPQPTLRRLLFCNNGISAAAASVIAQEIVLQNGKDAQSTLEEFHFYNNMSGHDGCVAVANVLAQCKKLTLLRYA----SARAGPEASEEMARSVNTHLRQLKSLDLSDCSF--EEDGATQ--------LAEAISKQPNLRYLKLRDASLCAEGVEKVAKALTSSNIQLVELDLSGNELADEGIAALALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADSLP------------ALEELSLCGNEITAKGAIAVVDTFVPT----------KMALVRVELDTNMISDKGVEHIKASLAKQGKANILGSLE 833          
BLAST of NO29G00390 vs. NCBI_GenBank
Match: ETK87014.1 (hypothetical protein L915_08456, partial [Phytophthora parasitica])

HSP 1 Score: 145.6 bits (366), Expect = 4.400e-31
Identity = 123/397 (30.98%), Postives = 186/397 (46.85%), Query Frame = 0
Query:   82 KRVQLSNKSLSEEAAKVVADA-LRNLGEEIEHADISDIIAGKHEDEALRVLEIVSSSLAHQPLISINLSDNALGEKGLIACSSLLTAQPLLQSFFVCNNGLSATATATVASLLMYR----TPTLLRVLHFYNNMSGDEGLAVLGDAGGEEGERGVYQHAVGGSDGKGRXXXXXXXXXXXXXXLTGLKKVDLADNFFGGGEEGXTEGGLSVAGKLAEALGAQQGLEWLNLRDCGLEDTGVKAVLKSVSGKCRAVKRLDLSGNEMTRS--CGKALGRAVARWGGREEGKGGLTHLYLEENELGSPGAKALAEGGGKGGLRRCGALLYLNLNYNEVGRTGAVAVVRALVEREGGWKGRGEGRKRMTRVEMEGNQVGEEGREQMRALLEREGLGIMLGPME 472
            K + L  KS ++  AKV+AD+ L  L  +++  D++D+IAG+ EDEALRVL ++  +L    L  I+LSDNALGEKG+ AC  LL  QP L+    CNNG+SA A + +A  ++ +      + L   HFYNNMSG +G   + +   +  +  + ++A      +                L  LK +DL+D  F   E+G T+        LAEA+  Q  L +L LRD  L   GV+ V K+++     +  LDLSGNE+        AL                               A +L             AL  L+L  NE+   GA+AVV   V            +  + RVE++ N + ++G E ++A L ++G   +LG +E
Sbjct:  490 KSISLRGKSYTDSGAKVIADSFLSRLQSDLKVVDLADVIAGRPEDEALRVLSVMCHALRGHALDEIDLSDNALGEKGVRACFDLLIPQPTLRRLLFCNNGISAAAASVIAQEIVLQNGKDAQSTLEEFHFYNNMSGHDGCVAVANVLAQCKKLTLLRYA----SARAGPEASEEMARSVNTHLRQLKSLDLSDCSF--EEDGATQ--------LAEAISKQPNLRYLKLRDASLCAEGVEKVAKALTSSNIQLVELDLSGNELADEGIAALALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADSLP------------ALEELSLCGNEITAKGAIAVVDTFVPT----------KMALVRVELDTNMISDKGVEHIKASLAKQGKANILGSLE 850          
BLAST of NO29G00390 vs. NCBI_GenBank
Match: ETM46841.1 (hypothetical protein L914_08335, partial [Phytophthora parasitica])

HSP 1 Score: 145.6 bits (366), Expect = 4.400e-31
Identity = 123/397 (30.98%), Postives = 186/397 (46.85%), Query Frame = 0
Query:   82 KRVQLSNKSLSEEAAKVVADA-LRNLGEEIEHADISDIIAGKHEDEALRVLEIVSSSLAHQPLISINLSDNALGEKGLIACSSLLTAQPLLQSFFVCNNGLSATATATVASLLMYR----TPTLLRVLHFYNNMSGDEGLAVLGDAGGEEGERGVYQHAVGGSDGKGRXXXXXXXXXXXXXXLTGLKKVDLADNFFGGGEEGXTEGGLSVAGKLAEALGAQQGLEWLNLRDCGLEDTGVKAVLKSVSGKCRAVKRLDLSGNEMTRS--CGKALGRAVARWGGREEGKGGLTHLYLEENELGSPGAKALAEGGGKGGLRRCGALLYLNLNYNEVGRTGAVAVVRALVEREGGWKGRGEGRKRMTRVEMEGNQVGEEGREQMRALLEREGLGIMLGPME 472
            K + L  KS ++  AKV+AD+ L  L  +++  D++D+IAG+ EDEALRVL ++  +L    L  I+LSDNALGEKG+ AC  LL  QP L+    CNNG+SA A + +A  ++ +      + L   HFYNNMSG +G   + +   +  +  + ++A      +                L  LK +DL+D  F   E+G T+        LAEA+  Q  L +L LRD  L   GV+ V K+++     +  LDLSGNE+        AL                               A +L             AL  L+L  NE+   GA+AVV   V            +  + RVE++ N + ++G E ++A L ++G   +LG +E
Sbjct:  490 KSISLRGKSYTDSGAKVIADSFLSRLQSDLKVVDLADVIAGRPEDEALRVLSVMCHALRGHALDEIDLSDNALGEKGVRACFDLLIPQPTLRRLLFCNNGISAAAASVIAQEIVLQNGKDAQSTLEEFHFYNNMSGHDGCVAVANVLAQCKKLTLLRYA----SARAGPEASEEMARSVNTHLRQLKSLDLSDCSF--EEDGATQ--------LAEAISKQPNLRYLKLRDASLCAEGVEKVAKALTSSNIQLVELDLSGNELADEGIAALALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADSLP------------ALEELSLCGNEITAKGAIAVVDTFVPT----------KMALVRVELDTNMISDKGVEHIKASLAKQGKANILGSLE 850          
BLAST of NO29G00390 vs. NCBI_GenBank
Match: KUF86691.1 (RAN GTPase-activating protein 2 [Phytophthora nicotianae])

HSP 1 Score: 145.2 bits (365), Expect = 5.700e-31
Identity = 123/397 (30.98%), Postives = 186/397 (46.85%), Query Frame = 0
Query:   82 KRVQLSNKSLSEEAAKVVADA-LRNLGEEIEHADISDIIAGKHEDEALRVLEIVSSSLAHQPLISINLSDNALGEKGLIACSSLLTAQPLLQSFFVCNNGLSATATATVASLLMYR----TPTLLRVLHFYNNMSGDEGLAVLGDAGGEEGERGVYQHAVGGSDGKGRXXXXXXXXXXXXXXLTGLKKVDLADNFFGGGEEGXTEGGLSVAGKLAEALGAQQGLEWLNLRDCGLEDTGVKAVLKSVSGKCRAVKRLDLSGNEMTRS--CGKALGRAVARWGGREEGKGGLTHLYLEENELGSPGAKALAEGGGKGGLRRCGALLYLNLNYNEVGRTGAVAVVRALVEREGGWKGRGEGRKRMTRVEMEGNQVGEEGREQMRALLEREGLGIMLGPME 472
            K + L  KS ++  AKV+AD+ L  L  +++  D++D+IAG+ EDEALRVL ++  +L    L  I+LSDNALGEKG+ AC  LL  QP L+    CNNG+SA A + +A  ++ +      + L   HFYNNMSG +G   + +   +  +  + ++A      +                L  LK +DL+D  F   E+G T+        LAEA+  Q  L +L LRD  L   GV+ V K+++     +  LDLSGNE+        AL                               A +L             AL  L+L  NE+   GA+AVV   V            +  + RVE++ N + ++G E ++A L ++G   +LG +E
Sbjct:  473 KSISLRGKSYTDSGAKVIADSFLSRLQSDLKVVDLADVIAGRPEDEALRVLSVMCHALRGHALDEIDLSDNALGEKGVRACFDLLIPQPTLRRLLFCNNGISAAAASVIAQEIVLQNGKDAQSTLEEFHFYNNMSGHDGCVAVANVLAQCKKLTLLRYA----SARAGPEASEEMARSVNTHLRQLKSLDLSDCSF--EEDGATQ--------LAEAISKQPNLXYLKLRDASLCAEGVEKVAKALTSSNIQLVELDLSGNELADEGIAALALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADSLP------------ALEELSLCGNEITAKGAIAVVDTFVPT----------KMALVRVELDTNMISDKGVEHIKASLAKQGKANILGSLE 833          
BLAST of NO29G00390 vs. NCBI_GenBank
Match: XP_005535850.1 (probable Ran GTPase activating protein [Cyanidioschyzon merolae strain 10D] >BAM79564.1 probable Ran GTPase activating protein [Cyanidioschyzon merolae strain 10D])

HSP 1 Score: 144.8 bits (364), Expect = 7.500e-31
Identity = 137/421 (32.54%), Postives = 201/421 (47.74%), Query Frame = 0
Query:    7 PDHEDEEA---HRLFLARNPSFVLRGARENVDAARAAALVAESLDQLRLDLAKAADAAAVIETKDEENGXXXXKKGGCKRVQLSNKSLSEEAAKVVADALRNLGE-EIEHADISDIIAGKHEDEALRVLEIVSSSLAHQPLISINLSDNALGEKGLIACSSLLTAQPLLQSFFVCNNGLSATATATVASLLM-YRTPTLLRVLHFYNNMSGDEGLAVLGDAGGEEGERGVYQHAVGGSDGKGRXXXXXXXXXXXXXXLTGLKKVDLADNFFGGGEEGXTEGGLSVAGKLAEALGAQQGLEWLNLRDCGLEDTGVKAVLKSVSGKCR--AVKRLDLSGNEMTRSCGKALGRAVARWGGREEGKGGLTHLYLEENELGSPGAKALAEGGGKGGLRRCGALLYLNLNYNEVGRTGAVAVVRALV 421
            PD   EEA   H  F  + PSF L+G RE +DA RA AL     D            A++  T   E           +RV LS KS   EAA V A+ +  L    + +  ++D+IAG+ E EAL+VLE+++++ A   ++ ++LSDNALG KG+ AC++L      L+S  +CNNGL+A A   +   L        L+ LH +NN+  DEG   L        ER         +  +                   L+++D+ DN    G++G        A  LA+ L  Q  LE L LRDC L D G + +L+++  +     ++ LDLSGNE+    G A G  + ++   E     LTHL L+ENELG  GA A+A    +   R    L+ L+L  N++G   A  +V+  V
Sbjct:   13 PDGVAEEARPGHVGFDPQRPSFCLQGEREKIDAERARALFTPLRD------------ASIATTSGTE------ADPSFERVSLSGKSFDVEAAGVAAEHIALLRPGSVRYLQLADVIAGQSEIEALQVLELLAAAFAAHQVVELDLSDNALGAKGVRACAALFQRSERLESLILCNNGLAADAIKLIVDALTGSEKRVYLKKLHLFNNLLKDEGALALVPL----IERAPLLEDFRFASLRVSRGGSIAVAEALTRVAPTLRRLDMTDNVI--GKDG--------AKALAQLLEQQTHLEELYLRDCLLTDAGARCILEALMRQTEQPRLRVLDLSGNEL---IGAATGSLLGKF--LEHCAPTLTHLRLDENELGDGGALAIANALARDPQR--FRLVELSLYLNDIGGRAAFMLVQRCV 394          
BLAST of NO29G00390 vs. NCBI_GenBank
Match: OQR95756.1 (hypothetical protein THRCLA_07598 [Thraustotheca clavata])

HSP 1 Score: 136.3 bits (342), Expect = 2.700e-28
Identity = 154/448 (34.38%), Postives = 205/448 (45.76%), Query Frame = 0
Query:   24 SFVLRGARENVDAARAAALVAESLDQLRLDLAKAADAAAVIETKDEENGXXXXKKGGCKRVQLSNKSLSEEAAKVVADALRNLGEEIEHADISDIIAGKHEDEALRVLEIVSSSLAHQPLISINLSDNALGEKGLIACSSLLTAQPLLQSFFVCNNGLSATATATVASLLMYRTPTLLRVLHFYNNMSGDEGLAVLGDAGGEEGERGVYQHAVGGSDGKGRXXXXXXXXXXXXXXLTGLKKVDLADNFFGGGEEGXTEGGLSVAGKLAEALGAQQGLEWLNLRDCGLEDTGVKAVLKSVSGKCRAVKRLDLSGNEMTRSCGKALGRAVARWGGREEGKGGLTHLYLEENELGSPGAKALAEGGGKGGLRRCGALLYLNLNYNEVGRTGAVAVVRALVEREGGWKGRGEGRKRMTRVEMEGNQVGEEGREQMRALLEREGLGIMLGPME 472
            + VL+G RE VDAARA AL+A           KA+ +                      R+ L NKS S EAAKV+A+ L+ +   +  AD++D+IAG+ EDEAL VLE V  SL    L+ I+LSDNALGEKG+ AC  +L  Q  L+  F+CNNGLSA +   VA +L++R  T L+  HFYNNMSGD         GG +    +  H     D   RXXXXXXXXXXXXXX                    X                                       LK+   K   ++ LD+SGN++T +  +ALG+ VA     EE       L +EENE+GS GA+ LA    K  +     L     N NE+   GA  +  AL                + RVE++GN + EE  E+++ L        +L  ME
Sbjct:    3 ALVLQGDREFVDAARATALLAP---------FKASSS--------------------FYRISLRNKSYSLEAAKVLANFLKTIPNGLRVADLADMIAGRPEDEALLVLENVCRSLKGHQLVEIDLSDNALGEKGVRACFDILLEQYHLEKLFLCNNGLSAESAKVVADVLLFRGDTKLKTFHFYNNMSGD---------GGAKALATLIPHCPELED--LRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKN---KVTGIRVLDVSGNDLTEASMEALGQLVAALPQLEE-------LRIEENEIGSDGAQKLARFLHKKNV--ISKLRVFQSNTNEISSVGAWWIANALANNSA-----------LERVELDGNMLTEETIEKIKELFTAHKKSSVLVEME 387          
The following BLAST results are available for this feature:
BLAST of NO29G00390 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_002906326.12.700e-3633.16conserved hypothetical protein [Phytophthora infes... [more]
XP_005713207.16.100e-3333.11unnamed protein product [Chondrus crispus] >CDF334... [more]
XP_008869661.15.200e-3232.95hypothetical protein H310_06389, partial [Aphanomy... [more]
KUF96663.12.600e-3130.98hypothetical protein AM588_10006275 [Phytophthora ... [more]
ETI37564.14.400e-3130.98hypothetical protein F443_16512 [Phytophthora para... [more]
ETK87014.14.400e-3130.98hypothetical protein L915_08456, partial [Phytopht... [more]
ETM46841.14.400e-3130.98hypothetical protein L914_08335, partial [Phytopht... [more]
KUF86691.15.700e-3130.98RAN GTPase-activating protein 2 [Phytophthora nico... [more]
XP_005535850.17.500e-3132.54probable Ran GTPase activating protein [Cyanidiosc... [more]
OQR95756.12.700e-2834.38hypothetical protein THRCLA_07598 [Thraustotheca c... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL061nonsL061Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR038ncniR038Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR081ngnoR081Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005137NSK005137Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO29G00390.1NO29G00390.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100538g3gene9160Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO29G00390.1NO29G00390.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO29G00390 ID=NO29G00390|Name=NO29G00390|organism=Nannochloropsis oceanica|type=gene|length=1932bp
ATGGCCTCCACCTTCACCCCGGACCATGAAGACGAAGAAGCCCACCGACT
TTTCCTAGCCCGAAACCCTTCCTTCGTCCTCCGCGGAGCCCGTGAGAATG
TCGACGCCGCCCGTGCCGCTGCGCTCGTGGCCGAGTCCCTCGACCAGCTC
AGATTGGACCTTGCAAAAGCTGCAGACGCAGCGGCGGTGATAGAAACGAA
AGATGAGGAAAATGGAGGGAACGGAGGAAAGAAGGGAGGCTGTAAACGCG
TGCAGCTTTCTAACAAGTCCTTGTCTGAGGAAGCGGCCAAAGTGGTAGCC
GATGCTTTGAGAAACTTAGGGGAGGAAATCGAGCATGCTGATATCTCAGA
CATCATTGCTGGAAAACATGAGGATGAAGCGTTGAGGGTCCTCGAGATTG
gtaagtttacaaggaatggagggaaggagggaagtaagtagggaaggagg
gacggagggagggaaggggatgtctatgatgatgtaattatttctgctgc
atttatgatggcagaaaatgcggcgcatagcatgcagtagctaagcaaat
tgatgccattagtttaatgcgcaggtgcttttttttctttgtgcctcatg
tcacgtgcgatggagcatccaccttccatccatccactcatcgcccctct
atctacctacctacctacctacctccctccctccctccctctccctcctc
ttagTCTCGTCCTCCCTTGCCCACCAGCCCCTCATCAGCATCAATCTCAG
CGACAACGCCCTGGGCGAGAAGGGATTGATTGCCTGCTCCTCCCTCCTCA
CTGCCCAACCCCTCCTACAGTCCTTCTTCGTCTGCAATAACGGCCTCAGT
GCCACGGCCACAGCCACCGTCGCCTCCCTCCTGATGTACCGCACTCCCAC
CCTCCTTCGTGTGCTGCATTTTTACAACAACATGTCCGGGGATGAGGgtg
cggtggcgtttgcttcccttttgcctcactgccctttactggagGACTTG
CGGTTCTCGGGGACGCGGGCGGGGAGGAAGGGGAGCGCGGCGTTTATCAA
CACGCTGTGGGAGGAAGCGACGGGAAAGGGAGGAGCCGAAGGAGGGGGGG
AGGAGGGAAGGAGGGAGGGGGGAGGTTGACGGGATTGAAGAAGGTCGACT
TGGCGGATAACTTTTTTGGAGGGGGGGAGGAGGGCGGGACGGAGGGAGGG
TTGTCTGTGGCTGGGAAGCTGGCCGAGGCTCTAGGAGCACAGCAAGGTCT
CGAGTGGTTGAATTTAAGGGATTGTGGGTTGGAGGACACAGGGGTGAAGG
CGGTACTGAAGAGCGTGAGTGGGAAATGCCGAGCCGTTAAGCGACTGGAC
CTGTCGGGGAATGAGATGACGAGGTCTTGCGGCAAGGCTCTGGGGAGGGC
AGTGGCGAGGTGGGGAGGGAGGGAGGAAGGAAAAGGGGGGTTAACGCATT
TATATCTGGAGGAGAACGAATTGGGGAGTCCGGGAGCAAAGGCACTGGCG
GAGGGAGGGGGGAAGGGAGGGTTGAGGCGTTGTGGGGCGTTACTGTATTT
GAATTTAAATTATAACGAGGTGGGACGGACGGGAGCCGTGGCCGTGGTGA
GGGCGCTGGTGGAGAGGGAGGGAGGGTGGAAGGGAAGGGGGGAGGGCAGG
AAGAGGATGACGAGGGTGGAGATGGAGGGGAATCAGGTGGGGGAAGAAGG
GAGGGAGCAGATGAGGGCGTTGTTGGAAAGGGAGGGATTGGGCATTATGC
TAGGGCCGATGGAGGAGGATGAGGAAGGGGAGGAGGAGGAGGAGGAGGAG
GAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAGGACGAGGAGGACGAGGA
GGAGAGTGAGGAGGAGGAGGAAGGGGAGGATGAGGGAGGGGTGGAGGACT
TGATCAAGGGGGTGGAGAAGGTGACGATATAA
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protein sequence of NO29G00390.1

>NO29G00390.1-protein ID=NO29G00390.1-protein|Name=NO29G00390.1|organism=Nannochloropsis oceanica|type=polypeptide|length=527bp
MASTFTPDHEDEEAHRLFLARNPSFVLRGARENVDAARAAALVAESLDQL
RLDLAKAADAAAVIETKDEENGGNGGKKGGCKRVQLSNKSLSEEAAKVVA
DALRNLGEEIEHADISDIIAGKHEDEALRVLEIVSSSLAHQPLISINLSD
NALGEKGLIACSSLLTAQPLLQSFFVCNNGLSATATATVASLLMYRTPTL
LRVLHFYNNMSGDEGLAVLGDAGGEEGERGVYQHAVGGSDGKGRSRRRGG
GGKEGGGRLTGLKKVDLADNFFGGGEEGGTEGGLSVAGKLAEALGAQQGL
EWLNLRDCGLEDTGVKAVLKSVSGKCRAVKRLDLSGNEMTRSCGKALGRA
VARWGGREEGKGGLTHLYLEENELGSPGAKALAEGGGKGGLRRCGALLYL
NLNYNEVGRTGAVAVVRALVEREGGWKGRGEGRKRMTRVEMEGNQVGEEG
REQMRALLEREGLGIMLGPMEEDEEGEEEEEEEEEEEEEEEEEEDEEDEE
ESEEEEEGEDEGGVEDLIKGVEKVTI*
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Synonyms
Publications