NO29G00310, NO29G00310 (gene) Nannochloropsis oceanica

Overview
NameNO29G00310
Unique NameNO29G00310
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3315
Alignment locationchr29:125414..128728 +

Link to JBrowse

Properties
Property NameValue
DescriptionARM repeat protein interacting with ABF2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr29genomechr29:125414..128728 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR015915Kelch-typ_b-propeller
IPR011333BTB/POZ_fold
IPR006652Kelch_1
IPR000210BTB/POZ-like
Homology
BLAST of NO29G00310 vs. NCBI_GenBank
Match: CEM13230.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 384.0 bits (985), Expect = 9.400e-103
Identity = 216/519 (41.62%), Postives = 280/519 (53.95%), Query Frame = 0
Query:  231 PCQRSLHVAAVLEDKLIVFGGYQGTERVADCYLYDFLRRRWSVVVPAPGGHPPPSPRDRHVGVVYKRTFYIFGGFDGSQRVNDFMGFSLDTREWRSV--------------------------------------------------VCLMGSAPTPRHSHTGVVYKDKFYVLTGYDGS-YRNDFHAFSFLQSAWAPVPCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXNHLNDSAVIHHESMYVFGGSTGSAMDDLHELNLEERRWRPIIP--PSGSLRPGQ------------------RFCHVACVWKHQMLVFGGYDGSQRLNDFWAFKFGPALLACQIPEPSLLPDLRGFVNSQALSDVTFIVEG-QRVYAHKILCVRSPYFRALFTGGMREAREGE-VVLPDVRYPIFLSLLEYLYTDSLTIDLPTSFQLFEAADRFGVERLKKMCEHKMLTSLSLDNAAMILYTADVYHAAGLRQKCLGFILQNFDAVSKTEGFVEMGHRNVDLVFEILKKR 677
            P QRSLHVA V++  + VFGGY G+ RV D   Y+F   +WS +    G    PS RDRHV V + +  YIFGG+DGS R+NDF  F  +   W  +                                                  V     AP  R+  + VV+KD   V  G+DG+ + NDF+ ++F +  W  +                               +H+   AVIH +SM++FGGSTG A +DL E  L+ R W  + P  P+ SL P Q                  RFCH   V+ + + +FGGYDG  RLNDF  FK     +  +IP  SL+ DL+ ++NS   SDVTFIVEG +RVYAHK++CVR  YFRA+F G MREAR+ E V + +V + +FL LLEYLYTD L I L  +  LF AAD+FGVERLKK+CE K+LTS+ +DNAA IL  AD++ A  LRQ C  FIL+NFDAVSKT+ F EMG  NV+LVFEILK+R
Sbjct:   26 PRQRSLHVAVVVDKCMYVFGGYDGSNRVNDFLKYNFKTTKWSQI--QSGAERGPSARDRHVAVAHDKCIYIFGGYDGSNRINDFWCFDTENETWTPIESQGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDFHEFNFAQRKWAPVQVKNQNQAPKARYRTSAVVWKDTMLVFGGHDGAKHLNDFYEYNFEERIWTQI------------------EQGGKMGPPSPRDSHI---AVIHGDSMHLFGGSTGQARNDLFEFRLDTREWHEVKPALPNTSLSPVQGRTAASTQEAIQKATPCPRFCHTGVVYNNSLYIFGGYDGQNRLNDFRQFKLVDE-VNVEIPSSSLIQDLKNYINSPLFSDVTFIVEGDKRVYAHKLMCVRCSYFRAMFQGEMREARQSEPVEIKNVSHRVFLGLLEYLYTDELDISLDMAMDLFVAADQFGVERLKKLCERKILTSIDIDNAATILQAADLHTAVSLRQSCFDFILRNFDAVSKTQSFEEMGRANVELVFEILKRR 520          
BLAST of NO29G00310 vs. NCBI_GenBank
Match: GAX22724.1 (hypothetical protein FisN_4Hh164 [Fistulifera solaris])

HSP 1 Score: 354.0 bits (907), Expect = 1.000e-93
Identity = 184/506 (36.36%), Postives = 249/506 (49.21%), Query Frame = 0
Query:  231 PCQRSLHVAAVLEDKLIVFGGYQGTERVADCYLYDFLRRRWSVVVPAPGGHPPPSPRDRHVGVVYKRTFYIFGGFDGSQRVNDFMGFSLDTREWRSVVC--LMGSAPTPRHSHTGVVYKDKFYVLTGYDGSYRNDFHAFSFLQSAWAPVPCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXNHLNDSAVIHHESMYVFGGSTG--------------------------------------------------SAMDDLHELNL--------EERRWRPIIPPSGSLRPGQRFCHVACVWKHQMLVFGGYDGSQRLNDFWAFKFGPALLACQIPEPSLLPDLRGFVNSQALSDVTFIVEGQRVYAHKILCVRSPYFRALFTGGMREAREGEVVLPDVRYPIFLSLLEYLYTDSLTIDLPTSFQLFEAADRFGVERLKKMCEHKMLTSLSLDNAAMILYTADVYHAAGLRQKCLGFILQNFDAVSKTEGFVEMGHRNVDLVFEILKKR 677
            P  RSLH  AVL   + +FGGY GT+RV   + + F+ +RWS V+P+P   PPPSPRDRHV  V+  +FY+ GGF+G  RV D  GF   T  WR +    + G  P+PRHSH+ VVY    ++  GYDGSY++D H + F+ S W+ +                                    + V+H   M VFGG  G                                                  SAM+D +EL L           RWRPI   S    P  RFCHV  V    +  FGGYDG  RLNDF  F F    L+ ++P  +L+ DLR  +N+  LSDVTF+VEG+ VYAHK++ +R PYF ALF   MRE+R  E+ +  V YP+F+S+LEYLYTD + +    +  +F AAD F + RLK MCE +ML S+                          +++ +F+ VSK+  F EMG  N++LVFE+L+ R
Sbjct:  161 PSPRSLHAGAVLNGAMYIFGGYDGTQRVNTFHAFSFIEKRWSPVLPSPHSPPPPSPRDRHVAFVFGNSFYVHGGFNGHSRVADMYGFDFSTMTWREINTSGMTGRVPSPRHSHSAVVYGHSLFIAFGYDGSYKSDIHEYDFVNSRWSAIAAGGRRPRP-----------------------RYRATTVVHKNYMLVFGGHDGVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAMNDFYELQLPAGSLDSSATARWRPIKSSSRDFEPRPRFCHVGAVHDGSLYCFGGYDGRDRLNDFVRFDFTVYDLSFELPPSTLVSDLRSMINNSTLSDVTFLVEGKPVYAHKLMLMRCPYFEALFLSKMRESRMTEIPISQVSYPVFMSILEYLYTDQVKMTTSNAMDIFVAADLFCIPRLKTMCEKQMLQSIXXXXXXXXXXXXXXXXXXXXXXXXXXYVVSHFEEVSKSSTFEEMGRNNIELVFELLQSR 643          
BLAST of NO29G00310 vs. NCBI_GenBank
Match: XP_002177255.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC51718.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 345.9 bits (886), Expect = 2.800e-91
Identity = 213/480 (44.38%), Postives = 263/480 (54.79%), Query Frame = 0
Query:  231 PCQRSLHVAAVLEDKLIVFGGYQGTERVADCYLYDFLRRRWSVVVPAPGGHPPPSPRDRHVGVVYKRTFYIFGGFDGSQRVNDFMGFSLDTREWRSVVCLMGSAPTPRHSHTGVVYKDKFYVLTGYDGSYRNDFHAFSF---------------------------LQSAWAPVPCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXNHLNDSAVIHHESMYVFGGSTGSAMDDLHELNLE-----ERRWRPIIPPSGSLRPGQRFCHVACVWKHQMLVFGGYDGSQRLNDFWAFKFGPALLACQIPEPSLLPDLRGFVNSQALSDVTFIVEGQ--RVYAHKILCVRSPYFRALFTGGMREAREGEVVLPDVRYPIFLSLLEYLYTDSLTIDLPTSFQLFEAADRFGVERLKKMCEHKMLTSLSLDNAAMILYTADVYHAAGLRQKCLGFILQNFDAVSKTEGFVEMGHRNVDLVFEILKKR 677
            P  RSLH  A+L      FGGY G +RV   + + F  +RWS V P+    PPP+PRDRHV V +   FY+ GGFDG+ RV DF  F   T  WR +V L G  P+PRHSH  VV+    Y+  GYDGSY++D H F F                                      XXXXXXXXXXXXXXXXXXXXXXXXXXXX                       AM+DLHEL L        +WR  I  S + +P  RFCHVA V    M VFGGYDGS RLNDF  F F    L+ ++P+ +L+ D R  +N   LSDV+FIVEG+   +YAHK++ VR PYF +LF G MRE+R+  + +  V YPIFL+ LEYLYTD ++I L  + +LFEAAD F + RLK MCE +ML S                       K   FIL NF+ VSK+  F EMG  N++LVFE+L+ R
Sbjct:  161 PSPRSLHAGALLNGNFYTFGGYDGNQRVNTFHAFSFAEKRWSPVFPSANSSPPPTPRDRHVAVAFGNAFYVHGGFDGTSRVADFWAFDFSTMSWREIVALQGRHPSPRHSHAAVVHGHSMYIFGGYDGSYKSDLHEFDFTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMNDLHELQLPSSSSMSAKWRS-INASHAEQPRHRFCHVAVVHSDAMFVFGGYDGSDRLNDFIRFDFTVYDLSFEVPQSTLIADFRSMINDVTLSDVSFIVEGRDSPIYAHKLMLVRCPYFESLFLGSMRESRQATIYIEQVSYPIFLATLEYLYTDHVSISLKNAMELFEAADLFCIPRLKTMCEKRMLQSXXXXXXXXXXXXXXXXXXXXXXXKVKKFILSNFEEVSKSSCFEEMGRSNIELVFELLQSR 639          
BLAST of NO29G00310 vs. NCBI_GenBank
Match: GAX19250.1 (hypothetical protein FisN_4Lh164 [Fistulifera solaris])

HSP 1 Score: 344.4 bits (882), Expect = 8.300e-91
Identity = 180/483 (37.27%), Postives = 238/483 (49.28%), Query Frame = 0
Query:  231 PCQRSLHVAAVLEDKLIVFGGYQGTERVADCYLYDFLRRRWSVVVPAPGGHPPPSPRDRHVGVVYKRTFYIFGGFDGSQRVNDFMGFSLDTREWR--SVVCLMGSAPTPRHSHTGVVYKDKFYVLTGYDGSYRNDFHAFSFLQSAWAPVPCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXNH---------------------------LNDSAVIHHESMYVFGGSTGSAMDDLHELNL--------EERRWRPIIPPSGSLRPGQRFCHVACVWKHQMLVFGGYDGSQRLNDFWAFKFGPALLACQIPEPSLLPDLRGFVNSQALSDVTFIVEGQRVYAHKILCVRSPYFRALFTGGMREAREGEVVLPDVRYPIFLSLLEYLYTDSLTIDLPTSFQLFEAADRFGVERLKKMCEHKMLTSLSLDNAAMILYTADVYHAAGLRQKCLGFILQNFDAVSKTEGFVEMGHRNVDLVFEILKKR 677
            P  RSLH  AVL   + +FGGY GT+RV   + + F+ +RWS V+P+P   PPPSPRDRHV  V+  +FY+ GGF+G  RV D  GF   T  WR  S+  + G  P+PRHSH+ VVY    ++  GYDGSY++D H + F+ S W+ V                                H                                               SAM+D +EL L           RWRPI   S    P  RFCHV  V    +  FGGYDG  RLNDF  F F    L+ ++P  +L+ DLR  +N+  LSDVTF+VEGQ VYAHK++ +R PYF ALF   MRE+R  E+ +  V YP+F+S+LEYLYTD + +    +  +F AAD F + RLK MCE  ML S++                             +F+ VSK+  F EMG  N++LVFE+L+ R
Sbjct:  164 PSPRSLHAGAVLNGAMYIFGGYDGTQRVNTFHAFSFIEKRWSPVLPSPHSPPPPSPRDRHVAFVFGNSFYVHGGFNGHSRVADMFGFDFSTMTWREISMSGMTGRVPSPRHSHSAVVYGHSLFIAFGYDGSYKSDIHEYDFVNSRWSAVAAGGRRPRPRYRATTEVHKNYMLVFGGHDGVRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAMNDFYELQLPAGTLDSSAAARWRPIKSSSRDFEPRPRFCHVGVVHDGSLYCFGGYDGRDRLNDFVRFDFTVYDLSFELPPSTLVSDLRSMINNSTLSDVTFLVEGQPVYAHKLMLMRCPYFEALFLCKMRESRMTEIPVSQVSYPVFMSILEYLYTDQVKMSTSNAMDIFVAADLFCIPRLKTMCEKHMLQSITXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHFEEVSKSSTFEEMGRNNIELVFELLQSR 646          
BLAST of NO29G00310 vs. NCBI_GenBank
Match: GBG32762.1 (Kelch domain-containing protein 3 [Aurantiochytrium sp. FCC1311])

HSP 1 Score: 334.3 bits (856), Expect = 8.500e-88
Identity = 207/480 (43.12%), Postives = 273/480 (56.88%), Query Frame = 0
Query:  231 PCQRSLHVAAVLEDKLIVFGGYQGTERVADCYLYDFLRRRWSVVVPAPGGHPPPSPRDRHVGVVYKRTFYIFGGFDGSQRVNDFMGFSLDTREWRSVVCLMGSAPTPRHSHTGVVYKDK--FYVLTGYDGSYRNDFHAFSFLQSAW--------APVP--------------CA--------XXXXXXXXXXXXXXXXXXXXXXXXXXXXNHLNDSAVIHHESMYVFGGSTGSAMDDLHELNLEERRWRPIIPPSGSLRPGQRFCHVACVWKHQMLVFGGYDGSQRLNDFWAFKFGPALLACQIPEPSLLPDLRGFVNSQALSDVTFIVEGQRVYAHKILCVRSPYFRALFT--GGMREAREGEVVLPDVRYPIFLSLLEYLYTDSLTIDLPTSFQLFEAADRFGVERLKKMCEHKMLTSLSLDNAAMILYTADVYHAAGLRQKCLGFILQNFDAVSKTEGFVEMGHRNVDLVFEILKKR 677
            P +RSLH   V +D +++FGGY G ERV D Y +     +W +V    G  PPPSPRDRH  +      ++FGG+DG  RVN+   F L  ++W S++    SAPT RHSH+G     +   Y+  GYDGSY ND H F  +   W         P P              CA        XXXXXXXXXXXXXXXXXXXXXXXXXXXX                               + +E  W  +      + P  RFCH + +    M  +GGYDGS RL D+  F FG   ++ Q+P  +++ DL   V++   SDV+F+VEG+R+ AH+I+CVR  YF+A+F   GG RE+R+ E+ + DVRY  F +LL YLYTD   + L  +  LF AADRFG+ERLK +CE+ ML+SL ++N + +   AD++HAAGL  +CL FI+QNFD VSKT GF EMG  N+DL+F ILK R
Sbjct:  787 PGKRSLHAMTVYKDTILLFGGYNGRERVNDFYQFSLKTHKWEIVPVLEGSSPPPSPRDRHTIMQLGHCLWVFGGYDGQVRVNELHSFDLQRKQW-SIINKDLSAPTARHSHSGCAVPSRKCLYIFGGYDGSYLNDLHEFDVMDYTWRCVKTNGTPPTPRYRATLVCMGHHLVCAMGHDGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKDEGVWSRV--TCNGMLPSPRFCHSSVLIGKTMYTYGGYDGSNRLEDWIEFSFGENRVS-QVPRSAIVSDLASLVDNPKCSDVSFLVEGRRIAAHRIVCVRCDYFKAMFAREGGFRESRQQEITILDVRYDTFYTLLRYLYTDRQDVPLEMAMDLFIAADRFGIERLKNICENGMLSSLDMENVSELFAAADLHHAAGLHSECLRFIVQNFDIVSKTRGFEEMGRSNIDLIFTILKNR 1262          
BLAST of NO29G00310 vs. NCBI_GenBank
Match: OEU20548.1 (galactose oxidase [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 329.3 bits (843), Expect = 2.700e-86
Identity = 184/499 (36.87%), Postives = 244/499 (48.90%), Query Frame = 0
Query:  231 PCQRSLHVAAVLEDKLIVFGGYQGTERVADCYLYDFLRRRWSVVVPAPGGHPPPSPRDRHVGVVYKRTFYIFGGFDGSQRVNDFMGFSLDTREWRSVV------------------------------------------------CLMGSAPTPRHSHTGVVYKDKFYVLTGYDGSYRNDFHAFSFLQSAWAPVPCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXNHLNDSAVIHHESMYVFGGSTGSAMDDLHELNLEER-----RWRPIIPPSGSLRPGQRFCHVACVWKHQMLVFGGYDGSQRLNDFWAFKFGPALLACQIPEPSLLPDLRGFVNSQALSDVTFIVEGQRVYAHKILCVRSPYFRALFTGGMREAREGEVVLPDVRYPIFLSLLEYLYTDSLTIDLPTSFQLFEAADRFGVERLKKMCEHKMLTSLSLDNAAMILYTADVYHAAGLRQKCLGFILQNFDAVSKTEGFVEMGHRNVDLVFEILKKR 677
            P  RSLH AA+L D   VFGGY G  RV   + + F  +RWS V+P+     PPSPRDRHV V +  +FY+ GGFDG  RV DF  F   +  WR V+                                                                               + +D H F  +   W+P+  A                            +H+   AV H  SMY+FGGSTGSAMDDL+EL L E      +WR  +  SGS+    RFCHV       + VFGGY G  RLNDF  F F    L+ +IP  SL+ + RG V+++ LSDV F+VEG +VYAHK++ +R  YFRAL  G M+E++E  + +  V +PIFL +LEYLYTD L I L ++ +LFEAAD F + RLK MCE +ML S++++N            A  LRQK   +I+  F+ +SKT  F +MG  N+DLVFE+L+ R
Sbjct:   43 PAARSLHAAAILNDIFYVFGGYDGILRVNTFHAFSFAEKRWSPVLPSANSDGPPSPRDRHVAVGFGNSFYVHGGFDGISRVGDFWLFDFSSMTWREVIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRHLSDTHIFDIVNRVWSPLSIA------------------SGSNTPIPRDSHI---AVTHSNSMYIFGGSTGSAMDDLYELQLPENPSLPGKWRE-LKSSGSII--ARFCHVGACHGEALFVFGGYSGLTRLNDFVRFDFAAYDLSFEIPSSSLISEFRGLVDNETLSDVRFVVEGTQVYAHKLMLMRCSYFRALILGEMKESKEETIRIEQVSHPIFLDILEYLYTDQLRIPLESAMELFEAADLFCIPRLKTMCEKRMLQSINIENXXXXXXXXXXXXALSLRQKAKKYIMSRFEIISKTSSFEDMGRNNIDLVFELLQSR 517          
BLAST of NO29G00310 vs. NCBI_GenBank
Match: XP_002290420.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED92172.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 318.2 bits (814), Expect = 6.300e-83
Identity = 231/644 (35.87%), Postives = 291/644 (45.19%), Query Frame = 0
Query:  231 PCQRSLHVAAVLEDKLIVFGGYQGTERVADCYLYDFLRRRWSVVV----PAPGG---------------------------------------------------HPPPSPRDRHVGVVYKRTFYIFGGFDGSQRVNDFMGFSLDTREWRSV-----------------------------------------------------------------------------VCLMGSAPTPRHSHTGVVYKDKFYVLTGYDGSYRNDFHAFSFLQSAWAPVPCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXNHL---------------------------NDSAVIHHESMYVFGGSTGSAMDDLHEL---------------------------NLEE--------RRWRPIIPPSGSLRPGQRFCHVACVWKHQMLVFGGYDGSQRLNDFWAFKFG-PALLACQIPEPSLLPDLRGFVNSQ---ALSDVTFIVEGQRVYAHKILCVRSPYFRALFTGGMREAREGEVVLPDVRYPIFLSLLEYLYTDSLTIDLPTSFQLFEAADRFGVERLKKMCEHKMLTSLSLDNAAMILYTADVYHAAGLRQKCLGFILQNFDAVSKTEGFVEMGHRNVDLVFEILKKR 677
            PCQRSLH AAVL D + +FGGY G  RV D Y Y F    W  ++    P  GG                                                     PP+PRDRH  V +  TFYIFGGFDG+ RV+D  GF ++   W  +                                                                                + S P+PRHSH  VVY D  YV  GYDGSYR+DFH F F+  +W PV  +   XXXXXXXXXXXXXXXXXXXXXXXXX HL                                               AM+DLHEL                            L E         +WR I P +G      RFCHV  V    + VFGGYDGS RLNDF  +      L   +IP P+LL DLR  ++ +   +LSD+T +VEG  V AHK++ +R PYFRA+  G M E+ +  V L  VR+PIF+S++EYLYTD ++I L ++ +LF AAD F + RL+ MCE K+L S+++DNAA I + ADV+ A+ LR K LG++L +F+AVSKT  F +M   NV+LVFEILK R
Sbjct:  216 PCQRSLHAAAVLRDSMFIFGGYDGQNRVNDFYQYHFPSASWKEIITLGAPLVGGVATAQQXXXXXXXXXXXXXXXXXXXXXXXXXXXVVGVGVHHRSFGATVTATGTPPTPRDRHAAVAHGSTFYIFGGFDGTSRVSDLYGFDVERLVWNEIRPRVMTTPTNNNVNEGNAGQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQIHSPPSPRHSHAAVVYNDSMYVFGGYDGSYRSDFHEFDFIHLSWRPVFGSGRSXXXXXXXXXXXXXXXXXXXXXXXXXRHLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMNDLHELAFPPSSQEKFATDSSAAPDYATTAGSFGLREGENGEPALAKWRQIPPIAGGGIAVHRFCHVGAVHNGSLYVFGGYDGSSRLNDFVKYDLAIDDLFQTEIPPPTLLSDLRSILDDEGAMSLSDITLMVEGIPVRAHKLMLMRCPYFRAMLLGDMAESSQTIVNLEIVRHPIFMSVMEYLYTDDVSIPLDSAMELFVAADLFDIPRLQAMCERKLLESITIDNAATIFHAADVHSASSLRNKALGYVLAHFEAVSKTPAFEDMARCNVELVFEILKNR 859          
BLAST of NO29G00310 vs. NCBI_GenBank
Match: XP_009034935.1 (hypothetical protein AURANDRAFT_23618 [Aureococcus anophagefferens] >EGB10102.1 hypothetical protein AURANDRAFT_23618 [Aureococcus anophagefferens])

HSP 1 Score: 309.7 bits (792), Expect = 2.300e-80
Identity = 207/471 (43.95%), Postives = 246/471 (52.23%), Query Frame = 0
Query:  231 PCQRSLHVAAVLEDKLIVFGGYQGTERVADCYLYDFLRRRWSVVVPAPGGHPPPSPRDRHVGVVYKRTFYIFGGFDGSQRVNDFMGFSLDTREWRSVVCLMGSAPTPRHSHTGVVYKDKFYVLTGYDGSYRNDFHAFSFLQSAWAPVPCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXNHLNDSAVIHHESMYVFGGSTGSAMDDLHELNLEERRWRPIIPPSGSLRPG-------------------------QRFCHVACVWKHQMLVFGGYDGSQRLNDFWAFKFGPALLACQIPEPSLLPDLRGFVNSQALSDVTFIVEGQRVYAHKILCVRSPYFRALFTGGMREAREGEVVLPDVRYPIFLSLLEYLYTDSLTIDLPTSFQLFEAADRFGVERLKKMCEHKMLTSLSLDNAAMILYTADVYHAAGLRQKCLGFILQNFDAVSKTEGFVEMGHRNVDLVFEILKKR 677
            PCQRSLHVAA+  DK++ FGGY G+ RV DC+ +DF +R WS+VVPA G   PP+PRDRHV VV+  +FY+F GFDG+ RVNDF  FS  +  W  V  L G AP+PRHSH  VVY D  YV  GYDGSYR                   XXXXXXXXXXXXXXXXXXXXXXXXXXXX                                                                                                    RLNDF  FKFG       IP  SL+ DLR  V+S+ LSDVTF+V+G  V AHK+LC+R  YFRAL TG M E+R  E+ + DVR+PIFL+LLEYLYTD++ I L  + +LF+AAD+FGVERLK+MCE KML S+ +                            NFDAV++T  F EMG  NV+LVFEILK R
Sbjct:   13 PCQRSLHVAAIWRDKMLCFGGYDGSNRVNDCWEFDFGKRSWSLVVPASGS--PPTPRDRHVAVVWGSSFYVFAGFDGTSRVNDFHEFSFGSSSWAPVRALSGLAPSPRHSHAAVVYHDSLYVFGGYDGSYRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRLNDFLEFKFG--FGGTDIPASSLITDLRQLVDSETLSDVTFLVDGLPVRAHKVLCMRCSYFRALLTGEMLESRASEIAINDVRHPIFLALLEYLYTDNVDIALDIAMELFQAADQFGVERLKRMCESKMLASIHVXXXXXXXXXXXXXXXXXXXXXXXXXXXXNFDAVTRTASFEEMGRVNVELVFEILKSR 479          
BLAST of NO29G00310 vs. NCBI_GenBank
Match: OQR97124.1 (hypothetical protein ACHHYP_20629 [Achlya hypogyna])

HSP 1 Score: 309.7 bits (792), Expect = 2.300e-80
Identity = 204/525 (38.86%), Postives = 259/525 (49.33%), Query Frame = 0
Query:  231 PCQRSLHVAAVLEDKLIVFGGYQGTERVADCYLYDFLRRRWSVVV-----------------------------------------------------------PAPGGHPPPSPRDRHVGVVYKRTFYIFGGFDGSQRVNDFMGFSLDTRE---WRSVVCLMGSAPTPRHSHTGVVYKDKFYVLTGYDGS-YRNDFHAFSFLQSAWAPVPCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXNHLNDSAVIHHESMYVFGGSTGSAMDDLHELNL-------------EERRWRPII---PPSGSLRPGQRFCHVACVWKHQMLVFGGYDGSQRLNDFWAFKFGPALLACQIPEPSLLPDLRGFVNSQALSDVTFIVEGQRVYAHKILCVRSPYFRALFTGGMREAREGEVVLPDVRYPIFLSLLEYLYTDSLTIDLPTSFQLFEAADRFGVERLKKMCEHKMLTSLSLDNAAMILYTADVYHAAGLRQKCLGFILQNFDAVSKTEGFVEMGHRNVDLVFEILKKR 677
            PC RSLHV AV +D + +FGGY G+ RV D + Y+F R+ W+ V+                                                                                              V        DT+E   W S V   G  P PR+  + V +K    +  G+DGS + ND H F+F                         XXXXXXXXXXXXXX                       AM+D HELNL             E   W+P+    PP     PGQRFCHV CV+   + +FGGYDGS RLNDF  F+FG   +   IP P L+ DLR  VN+Q +SD+TF+VEG  VYAHKILCVR  YF+A+ TG M E+R  EVV+PDVR  IFL+ LEYLYTD +T+D+ T+ +LF  ADR+GV+RLKK+CE KML+SL ++NAA IL+ AD++ A  LR +C+ F+L NFDAV+KT  F EMG  NVDLVFE+LK+R
Sbjct:   76 PCHRSLHVCAVHKDSMYIFGGYDGSNRVNDFFEYNFKRKVWTQVLAIGIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGPLRSAHADTKETCVW-SQVAATGRFPRPRYRASLVTHKSTCILFGGHDGSRHLNDVHIFNF-----------------------ALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMNDFHELNLGHLLLTPATDLAVENNVWQPMAFNGPP-----PGQRFCHVGCVYDDSLAIFGGYDGSNRLNDFKEFRFGEE-VELDIPPPCLVSDLRDLVNNQTMSDITFLVEGAPVYAHKILCVRCSYFKAMLTGEMLESRAREVVVPDVRKGIFLAFLEYLYTDHVTVDVETAMELFVTADRYGVDRLKKICESKMLSSLCIENAASILHAADMHSATILRDRCIAFMLNNFDAVTKTNAFEEMGRTNVDLVFELLKRR 570          
BLAST of NO29G00310 vs. NCBI_GenBank
Match: ETI34292.1 (hypothetical protein F443_19160 [Phytophthora parasitica P1569] >ETK74644.1 hypothetical protein L915_18586 [Phytophthora parasitica] >ETL28073.1 hypothetical protein L916_18489 [Phytophthora parasitica] >ETL81317.1 hypothetical protein L917_18310 [Phytophthora parasitica] >ETM34534.1 hypothetical protein L914_18400 [Phytophthora parasitica] >ETO63093.1 hypothetical protein F444_19112 [Phytophthora parasitica P1976])

HSP 1 Score: 283.9 bits (725), Expect = 1.300e-72
Identity = 163/472 (34.53%), Postives = 230/472 (48.73%), Query Frame = 0
Query:  231 PCQRSLHVAAVLEDKLIVFGGYQGTERVADCYLYDFLRRRWSVVVPAPGGHPPPSPRDRHVGVVYKRTFYIFGG--------------------FDGSQRVNDFMGFSLDTREWRSVVCLMGSAPTPRHSHTGVVYKDKFYVLTGYDG--SYRNDFHAFSFLQSAWAPVPCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXNHLNDSAVIHHESMYVFGGSTGSAMDDLHELNLEERRWRPIIPPSGSLRPGQRFCHVACVWKHQMLVFGGYDGSQRLNDFWAFKFGPALLACQIPEP----SLLPDLRGFVNSQALSDVTFIVEGQRVYAHKILCVRSPYFRALFTGGMREAREGEVVLPDVRYPIFLSLLEYLYTDSLTIDLPTSFQLFEAADRFGVERLKKMCEHKMLTSLSLDNAAMILYTADVYHAAGLRQKCLGFILQNFDAVSKTEGFVEMGHRNVDLVFEILKKR 677
            P QR  H A V +D   VFGGY G  R+ D + Y+FL + W+ V    G    P+PR  H  VVY    YIFGG                     D  + VND   F+L+T  W S++   G  P PR   + +VY     +  GYD    Y ND H F+F    W+ +                                  +    +H+ S+ VFGG T     +L+EL+LE   W  I     S +         CV    ++V   ++ +         +        +  EP    S +  LR  VN+Q +SDVTFIVEG+ ++ HK LCVR  YF+A+FTG M+E+  GEV + DV    FLSLLEY+YTD L +      +LF AADR+G+E LK++C  K+L S+++DN A IL  AD +++  LR +C  F L+NFD VSKT  F++M   N++L  +IL++R
Sbjct:   81 PSQRKSHSAVVYKDSFYVFGGYDGDRRLNDFFSYNFLTQTWTNVFVNAG--QQPTPRYGHAAVVYDNAMYIFGGSDSHYDRESMSSRSSSEYGRLDSGRHVNDMHSFNLETNSW-SLIRTTGEVPYPREGASMIVYNQSCLLFGGYDHDLGYLNDVHVFNFETRVWSSLETKGTAPTGCH-----------------------HPLVTLHNNSLIVFGGQTD---PNLYELDLESNTWETIAYSGSSPKSN---APTGCVSDDNLIVLSEHNEAASFKQIHLPEKKTTSKTQEDLEPDEEGSAIAHLRSLVNNQLMSDVTFIVEGEPIFGHKSLCVRCNYFKAMFTGEMKESTAGEVEISDVSRATFLSLLEYVYTDRLAVADDDVKELFVAADRYGIESLKRLCAQKLLKSVNVDNVASILQAADQHNSPSLRDECFAFTLKNFDTVSKTPSFLDMARNNIELALQILQQR 520          
The following BLAST results are available for this feature:
BLAST of NO29G00310 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
CEM13230.19.400e-10341.62unnamed protein product [Vitrella brassicaformis C... [more]
GAX22724.11.000e-9336.36hypothetical protein FisN_4Hh164 [Fistulifera sola... [more]
XP_002177255.12.800e-9144.38predicted protein [Phaeodactylum tricornutum CCAP ... [more]
GAX19250.18.300e-9137.27hypothetical protein FisN_4Lh164 [Fistulifera sola... [more]
GBG32762.18.500e-8843.13Kelch domain-containing protein 3 [Aurantiochytriu... [more]
OEU20548.12.700e-8636.87galactose oxidase [Fragilariopsis cylindrus CCMP11... [more]
XP_002290420.16.300e-8335.87predicted protein [Thalassiosira pseudonana CCMP13... [more]
XP_009034935.12.300e-8043.95hypothetical protein AURANDRAFT_23618 [Aureococcus... [more]
OQR97124.12.300e-8038.86hypothetical protein ACHHYP_20629 [Achlya hypogyna... [more]
ETI34292.11.300e-7234.53hypothetical protein F443_19160 [Phytophthora para... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL061nonsL061Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR038ncniR038Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR081ngnoR081Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK005128NSK005128Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO29G00310.1NO29G00310.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|559243gene_8199Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO29G00310.1NO29G00310.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO29G00310 ID=NO29G00310|Name=NO29G00310|organism=Nannochloropsis oceanica|type=gene|length=3315bp
ATGTCATCGATACCGTCCTTTCCTTTTGTCTCCTCGCTCCCAAACGTAAA
TGTTGCTTCCGGGCTGAATGCTGGCGCTGCTGGGGGTAGCGGCGGCGATG
GAGAAGGGGACGGAGGTGGGGATGCACTTGAGGAAATGGTAGCTCCTTCC
TTGGGCAATTTATCACTTTCCTCCCCCGATGCTAGCGCTAATGTCGCTGC
TGTGGGAGAAGAAGTGACAAATCGTGCCCGCGCAGCCAGCAGCGGCTGCA
GTGGTGGCTGTCTCAACAGCAGCAGCAGCAGCAGCAAAAGCAGCGGAAGA
AACAGCAGCAGCAGCAGCAGCAGCAGTGGCAAAAAGACGAGGCGTAAGCG
TGATTTCGCGATGAAAACCCCGGCACTGGTCTCGCCGACTTTAGACGCAA
CGTCGTTGGGGGAATGGGTCCGCCTTGATAGAGACTCCGACGACGAGGAC
GAGGACGAGAAGCAGGAGGAGCAGGGGGAAGGTGTGCTGGAGGAGGAGGA
CGAAGAAGGGCATGGAGAGGAGGCTGAAGAGGAGGAGGAAGAGGAGGAGG
ATAGCGGGGAGGAAGGGGAGGCAGGTGTCAACAACCACCCCTCAGGAGCA
GGCACAAGCCTTCCTCCTCCTCCTCATACTCATGCCATCGTTCCACGTCG
CCCCCGTACCAACCGCCATCGTAATCGTAACCGTTATAAACCCTGTCAAC
GTTCGCTGCACGTTGCCGCCGTGCTTGAGGACAAATTGATAGTCTTCGGG
GGCTATCAAGGCACTGAGCGTGTCGCAGATTGTTACTTGTACGATTTTCT
CCGACGGCGGTGGAGTGTAGTGGTGCCAGCGCCGGGAGGGCATCCCCCTC
CCAGTCCTCGGGACAGGCATGTGGGTGTGGTGTACAAGCGAACTTTCTAT
ATCTTCGGGGGCTTTGATGGCTCCCAGCGAGTGAATGACTTCATGGGCTT
CAGCCTTGATACCCGGGAGTGGCGATCAGTGGTGTGTCTGATGGGCTCGG
CGCCCACGCCACGGCACTCGCACACGGGTGTAGTTTACAAGGACAAATTC
TACGTGCTTACCGGgtgaatgaagagaccgagggagggagacaggatggg
gggatgggagagagggaggaaggacgggagggaaaggactctgaacttcc
aaataagggatctcaacagcctcgtctctctctcctttttcctccctccc
tccttccctccctccttccctccctccttccctccagGTACGATGGGAGC
TACCGGAATGATTTCCACGCGTTTTCCTTCCTGCAGTCCGCCTGGGCGCC
AGTCCCGTGCGCCGGTAAAATCCCCAGGCCTCGGTACCGCGCGACATCAT
GTGTGAAGgtagggggggagggagggacggagggagggacggagggaagg
ggatcgagaggagtccatggaataacatgaaaccgaaatggccccattcc
tcacccttccctccctccttccctccctccgattcctttcctccctcgct
tcccctccttcctcatcagAACGACAATCTCATTTTATTTGGAGGCCACG
ACGGCACCAACCACTTGAATGATgtctccctctttcacttcccctcctcc
acctggaccgtgctggagatctctcccggcgccctctaccctcccccctt
ccccgcgattcccagTCGGCCGTTATCCACCACGAGAgtaagatgatgat
aaggagggagggagggagggagggagggagggcgatatcttcttcactgg
gggagtgccttggatgccctccgcgagctctatcggggagtaaatcacca
cgcaaccaccgactcctccctccttccctccctccctccctccctccctc
cctccctccctccctccctccctccctccctagGCATGTACGTCTTCGGC
GGGTCCACAGGCAGTGCCATGGATGACCTCCACGAGCTTAACCTTGAGGA
AAGGCGATGGCGGCCAATCATCCCTCCGTCCGGAAGTCTCCGCCCTGGCC
AACGATTCTGCCACGTGGCGTGCGTGTGGAAGCACCAGATGCTGGTTTTT
GGGGGCTACGACGGCTCTCAACGgtaaggcgaagagggaaggagggaggg
agggagggagaaagagattgaggtcacaagcgtagcccttgctcttgatg
tctcatcctgctcccctctccctccctccttccctccttccctccttccc
tccttccctccccccttccctccctccgtagCCTGAATGACTTTTGGGCC
TTCAAGTTCGGTCCTGCCCTTCTGGCCTGCCAAATTCCCGAGCCCTCCCT
CCTTCCCGACCTCCGCGGCTTCGTCAACAGCCAAGCACTCTCGGACGTTA
CCTTCATCGTGGAGGGCCAGCGGGTTTATGCTCACAAAATCCTCTGTGTC
CGCTCTCCCTACTTCCGGGCATTgtgagcctttgcgcccaaccaaccctc
cctccctccctccctccctcccttcctccctccctccctccctctctgca
tttcaatctagcgggcccacgcctacctgtcctttgactctccctccctc
cctccctcctccagGTTCACCGGCGGGATGAGGGAGGCCAGAGAGGGGGA
AGTGGTGCTGCCAGACGTTCGCTACCCCATTTTTCTCTCCCTCCTCGAGT
ACCTCTACACGGACTgtaaggaccgagagggaggagagagggaagggaag
gaagatagtggccgtttgccacggacatcaccgatggatgaaccttccct
ccctccctctctccctccctacctcccttgtagCCCTGACCATCGACCTG
CCAACGTCCTTCCAGCTGTTTGAAGCTGCCGACCGTTTCGGAGTGGAACG
GCTTAAAAAAATGTGCGAGCACAAGATGCTCACGTCCCTCTCGCTGGACA
ACGCGGCTATGATTCTATACACCGCCGATGTCTACCACGCCGCGGGCTTG
CGGCAAAAGTGCTTGGGATTCATCCTCCAGgtacctcttcgccccctccc
tccctccctccctctctctgatctccatcaatttggtgacttttcaattt
ttttaatgaaagaatgtagacgtgcctggatgcgaagggttggattcgtc
tctggtatgaaaaatctaagccatgtgtatttgcgtgtatggagcctcct
cgacgtcatcctccttctcacgcgtgtccctcaccctccctccctccctc
cctccctcactccctcccttcccagAACTTCGACGCCGTGAGCAAGACGG
AGGGTTTTGTGGAGATGGGCCATCGGAACGTGGATTTGGTCTTTGAGATC
TTGAAGAAGCGGTAG
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protein sequence of NO29G00310.1

>NO29G00310.1-protein ID=NO29G00310.1-protein|Name=NO29G00310.1|organism=Nannochloropsis oceanica|type=polypeptide|length=677bp
MSSIPSFPFVSSLPNVNVASGLNAGAAGGSGGDGEGDGGGDALEEMVAPS
LGNLSLSSPDASANVAAVGEEVTNRARAASSGCSGGCLNSSSSSSKSSGR
NSSSSSSSSGKKTRRKRDFAMKTPALVSPTLDATSLGEWVRLDRDSDDED
EDEKQEEQGEGVLEEEDEEGHGEEAEEEEEEEEDSGEEGEAGVNNHPSGA
GTSLPPPPHTHAIVPRRPRTNRHRNRNRYKPCQRSLHVAAVLEDKLIVFG
GYQGTERVADCYLYDFLRRRWSVVVPAPGGHPPPSPRDRHVGVVYKRTFY
IFGGFDGSQRVNDFMGFSLDTREWRSVVCLMGSAPTPRHSHTGVVYKDKF
YVLTGYDGSYRNDFHAFSFLQSAWAPVPCAGKIPRPRYRATSCVKNDNLI
LFGGHDGTNHLNDSAVIHHESMYVFGGSTGSAMDDLHELNLEERRWRPII
PPSGSLRPGQRFCHVACVWKHQMLVFGGYDGSQRLNDFWAFKFGPALLAC
QIPEPSLLPDLRGFVNSQALSDVTFIVEGQRVYAHKILCVRSPYFRALFT
GGMREAREGEVVLPDVRYPIFLSLLEYLYTDSLTIDLPTSFQLFEAADRF
GVERLKKMCEHKMLTSLSLDNAAMILYTADVYHAAGLRQKCLGFILQNFD
AVSKTEGFVEMGHRNVDLVFEILKKR*
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Synonyms
Publications