NO28G01790, NO28G01790 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO28G01790 vs. NCBI_GenBank
Match: EWM22532.1 (hypothetical protein Naga_100290g2 [Nannochloropsis gaditana]) HSP 1 Score: 409.1 bits (1050), Expect = 1.600e-110 Identity = 191/302 (63.25%), Postives = 238/302 (78.81%), Query Frame = 0 Query: 76 DSSVSVGPRVHSLNFLSPPMPASPXXXXXXXXXXSNHYNRRCDAWRAIRLKTPKEISWQAKLEFALFKQEWRWIVVVLLAEYFNLVMHNFVYYLEGEIWGEAGPPPPLKDLGIMLFAGVFPPSAQWVVNLSLYLLVGMVLTLCLGRLLLNNVPWGGPQTMLVQEREDWEEVKTCSIPVPFVYLCKRACQVLSIALVLRVFSYMLTLEPNPAPYCHPPYWDPPNTVGEIMGRVEITGSCGDLLFSSHTLHSIVMLLTVLRHAPRLYIVCGISVCSMILVIMALLAFKNHYSHDIVTGEPASAL 378 D+ S G RV +++ LSPP SP SNH NR D+W+AIR K KEI WQ +LE+AL KQEW+WI + +AEYFNL+MHNFVY+LEG++WG +GPPPPL DLGIM FAG+FP S W+V LYLL+GMVL LCLGRLLLNNVPWG P+T+L E+ + E ++TC IPVPFVY+CKRACQVL+I LVLRV S++ TLEPNPA YCHPP+WDPP+ + EI+GR+EI GSCGDLLFS+HTLH++ M+LTVLRHAP LY+V G++V SM++V++++LAFKNHYSHDIVT S L Sbjct: 63 DACKSAGRRVSAVSILSPPSGPSPRLSEVSRSYYSNHRNRAWDSWKAIRCKKWKEIEWQGRLEWALLKQEWKWIAMFFVAEYFNLIMHNFVYWLEGKMWGASGPPPPLTDLGIMAFAGIFPLSYSWLVGFFLYLLIGMVLVLCLGRLLLNNVPWGCPETVL--EKREGETLRTCCIPVPFVYICKRACQVLTIGLVLRVLSFVFTLEPNPADYCHPPFWDPPDALLEILGRIEIVGSCGDLLFSAHTLHAMAMMLTVLRHAPGLYLVTGLAVASMVMVVISMLAFKNHYSHDIVTAIYTSVL 362
BLAST of NO28G01790 vs. NCBI_GenBank
Match: XP_005855301.1 (heat shock protein [Nannochloropsis gaditana CCMP526] >EKU21057.1 heat shock protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 335.1 bits (858), Expect = 3.000e-88 Identity = 152/218 (69.72%), Postives = 189/218 (86.70%), Query Frame = 0 Query: 153 LLAEYFNLVMHNFVYYLEGEIWGEAGPPPPLKDLGIMLFAGVFPPSAQWVVNLSLYLLVGMVLTLCLGRLLLNNVPWGGPQTMLVQEREDWEEVKTCSIPVPFVYLCKRACQVLSIALVLRVFSYMLTLEPNPAPYCHPPYWDPPNTVGEIMGRVEITGSCGDLLFSSHTLHSIVMLLTVLRHAPRLYIVCGISVCSMILVIMALLAFKNHYSHDIVT 371 L+AEYFNL+MHNFVY+LEG++WG +GPPPPL DLGIM FAG+FP S W+V LYLL+ MVL LCLGRLLLNNVPWG P+T+L E+ + E ++TC IPVPFVY+CKRACQVL+I LVLRV S++ TLEPNPA YCHPP+WDPP+ + EI+GR+EI GSCGDLLFS+HTLH++ M+LTVLRHAP LY+V G++V SM++V++++LAFKNHYSHDIVT Sbjct: 3 LVAEYFNLIMHNFVYWLEGKMWGASGPPPPLTDLGIMAFAGIFPLSYSWLVGFFLYLLIAMVLVLCLGRLLLNNVPWGCPETVL--EKREGETLRTCCIPVPFVYICKRACQVLTIGLVLRVLSFVFTLEPNPADYCHPPFWDPPDALLEILGRIEIVGSCGDLLFSAHTLHAMAMMLTVLRHAPGLYLVTGLAVASMVMVVISMLAFKNHYSHDIVT 218
BLAST of NO28G01790 vs. NCBI_GenBank
Match: EWM29203.1 (heat shock protein [Nannochloropsis gaditana]) HSP 1 Score: 218.0 bits (554), Expect = 5.300e-53 Identity = 109/254 (42.91%), Postives = 167/254 (65.75%), Query Frame = 0 Query: 123 IRLKTPKEISWQAKLEFALFKQ-------EWRWIVVVLLAEYFNLVMHNFVYYLEGEIWGEAGPPPPLKDLGIMLFAGVFPPSAQWVVNLSLYLLVGMVLTLCLGRLLLNNVPWGGPQTMLVQEREDWEEVKTCSIPVPFVYLCKRACQVLSIALVLRVFSYMLTLEPNPAPYCHPPYWDPPNTVGEIMGRVEITGSCGDLLFSSHTLHSIVMLLTVLRHAPRLYIVCGISVCSMILVIMALLAFKNHYSHDIV 370 + LK+ +E+ E+AL K+ + ++ + EY +L HN+VY+L+G+IWG GPPPPL DLG+ML A P +W++ + +LVG++ +L L RL L +V WGGPQ ++ R+ + KT ++P+P + +RACQ +S+ + LRV ++++TL PNPA YCH P WDPP VGEI R+ TGSCGDLLFS HT H +V++L V R+AP++ +S+ +M L+ ++LLAFK+HY+ D++ Sbjct: 157 VGLKSEREMRNLLSFEWALLKKGVPSSRPPLFFFLLWVFVEYVHLTAHNYVYFLQGKIWGVDGPPPPLPDLGLMLLADRLPDRYEWIIGFATAVLVGLMFSLGLLRLTLAHVKWGGPQ---IEVRDADNQHKT-TLPMPVSLVMQRACQAMSVGMSLRVVTFLVTLVPNPAAYCHGPDWDPPERVGEIFTRIRFTGSCGDLLFSGHTSHGMVLMLVVTRYAPKVRAAKALSIGAMTLLALSLLAFKSHYTSDVL 406
BLAST of NO28G01790 vs. NCBI_GenBank
Match: CCA24055.1 (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 95.9 bits (237), Expect = 3.000e-16 Identity = 76/256 (29.69%), Postives = 125/256 (48.83%), Query Frame = 0 Query: 136 KLEFALFKQEWRWIVVVLLAEYFNLVMHNFVYYLEGEIWGEAGPPPPLKDLGIMLFAGVFPPSAQWVVNLSLYLLVGMVLTLCLGRLLLNNVPWGGPQTMLVQEREDWEEVKTCSIPVPFVYLCKRACQVLSIALVLRVFSYMLTLEPNPAPYCH---------------------PPYWDPPNTVGEIMGRVEITGSCGDLLFSSHTLHSIVMLLTVLRHAPRLYIVCGISVCSMILVIMALLAFKNHYSHDIVT 371 KLE A+ QEW+ +V +L +Y + V HN+ YY++G + L DLG L P +LS YL+ G V + LL+++V LV ++ P + KR +SIALVLR+ S+M+T P+PA +C P ++PP TV + +++ CGDL+FSSHT++++ ++L+V ++ P ++ G+ V I + ++A + HYS D+ T Sbjct: 29 KLELAIALQEWKILVPCILMQYLHSVFHNWAYYIQGNVL-SVEQRVMLYDLGYAL----MPELTGTAAHLSEYLVFGAVFAPTI--LLISSV--------LVLKQNPLR-------PRFIAIILKRLLLQISIALVLRICSFMITSLPSPAEHCRLVFDEACKAANPNDYMKCVIPNPDFEPP-TVSQFFTKIDALRGCGDLMFSSHTIYTLSLILSVCKYWPHPLLI-GVMVSVQIAIAFLIVASRKHYSIDVFT 260
BLAST of NO28G01790 vs. NCBI_GenBank
Match: XP_009517302.1 (hypothetical protein PHYSODRAFT_469105 [Phytophthora sojae] >EGZ30027.1 hypothetical protein PHYSODRAFT_469105 [Phytophthora sojae]) HSP 1 Score: 93.2 bits (230), Expect = 2.000e-15 Identity = 72/269 (26.77%), Postives = 125/269 (46.47%), Query Frame = 0 Query: 121 RAIRLKTPKEISWQAKLEFALFKQEWRWIVVVLLAEYFNLVMHNFVYYLEGEIWGEAGPPPPLKDLGIMLFAGVFPPSAQWVVNLSLYLLVGMVLTLCLGRLLLNNVPWGGPQTMLVQEREDWEEVKTCSIPVPFVYLCKRACQVLSIALVLRVFSYMLTLEPNPAPYCH---------------------PPYWDPPNTVGEIMGRVEITGSCGDLLFSSHTLHSIVMLLTVLRHAPRLYIVCGISVCSMILVIMALLAFKNHYSHDI 369 R +L+ + K+E L KQEW+ I+ ++ +Y + + HN YY++G + L DLG L + + +A L + G + L L L P G P+ +++ + KR LSI LV R S+++T P+PA +C P ++PP T+GE+ R++ CGDL+FSSHT++++ ++LT+ ++ P Y + I VC I++ ++A + HY+ D+ Sbjct: 3 RVWQLRDKESFINYVKIEIQLLKQEWKIILPCVIMQYVHAIFHNLAYYIQGN-YLTVEQRFTLHDLGYELMSELTGFAASISDILVFAAVFGPAIVLVLTIPLFRQEP-GRPRYLVI--------------------VLKRCLLQLSICLVFRCISFLVTALPSPADHCELKFNETCLAANPDDPVPCVIPNPDFNPP-TIGELFTRLDSLTGCGDLMFSSHTIYTVSLILTIWKYWPNKYGIT-IMVCVQIIIAFLIVASRKHYTLDV 247
BLAST of NO28G01790 vs. NCBI_GenBank
Match: XP_002766894.1 (heat shock protein 70kD, putative [Perkinsus marinus ATCC 50983] >EEQ99611.1 heat shock protein 70kD, putative [Perkinsus marinus ATCC 50983]) HSP 1 Score: 87.8 bits (216), Expect = 8.300e-14 Identity = 61/249 (24.50%), Postives = 113/249 (45.38%), Query Frame = 0 Query: 134 QAKLEFALFKQEWRWIVVVLLAEYFNLVMHNFVYYLEGEIWGEAGPPPPLKDLGIMLFAG-----VFPPSAQWVVNLSLYLLVGMVLTLCLGRLLLNNVPWGGPQTMLVQEREDWEEVKTCSIPVPFVYLCKRACQVLSIALVLRVFSYMLTLEPNPAPYCH---------PPYWDPPNTVGEIMGRVEITGSCGDLLFSSHTLHSIVMLLTVLRHAPRLYIVCGISVCSMILVIMALLAFKNHYSHDI 369 ++++E+ +FK W WIV+ ++ + + HN+VYYL G+ GP L D G M F V P V+ ++L V V+ + +R+D+ + R V ++ R S+++T+ P PAP+C P++ PP + G+++ ++ CGDL+FSSH ++ ++ L V+ H R ++ I ++ +LA ++HY+ D+ Sbjct: 734 KSRIEWEVFKVAWPWIVIGIIFQILHDWAHNWVYYLSGKYGVYGGPENALVDFGHMAFPDIDTLTVSPAPENPVLYTCMFLAVAFVVI-----------------APIFGDRDDF----------TLIGAIWRVLNVCDFTILFRCISFLVTILPAPAPHCQEAPPPNAPLEPFFSPPTSAGQVLSGFDVQNGCGDLVFSSHMMYCLLATL-VVTHYSRSLVLMVIEWLLCCALVCLILAQRSHYTLDV 954
BLAST of NO28G01790 vs. NCBI_GenBank
Match: XP_009836809.1 (hypothetical protein H257_11531 [Aphanomyces astaci] >ETV73873.1 hypothetical protein H257_11531 [Aphanomyces astaci]) HSP 1 Score: 85.9 bits (211), Expect = 3.100e-13 Identity = 72/286 (25.17%), Postives = 122/286 (42.66%), Query Frame = 0 Query: 115 RRCDAWRAIRLKTPKEISWQAKLEFALFKQEWRWIVVVLLAEYFNLVMHNFVYYLEGEIWGEAGPPPPLKDLGIMLFAGVFPPSAQWVVNLSLYLLVGMVLTLCLGRLLLNNVPWGGPQTML---VQEREDWEEVKTCSIPVPFVYLCKRACQVLSIALVLRVFSYMLTLEPNPAPYCHP------------------------PYWDPPNTVGEIMGRVEITGSCGDLLFSSHTLHSIVMLLTVLRH---APRLYIVCGISVCSMILVIMALLAFKNHYSHDIVT 371 RRC +WR E+ A +E + EW+ ++ L +Y + + HN Y+++ ++ PL DLG L P ++ ++S YL+ G + GP +L V + + KR ++ L+LR S+M+T P PA +C P P + PP TVG I+G V+ CGDL+FSSHT +++ M+L V ++ P L ++ + V + ++ A + HYS D+++ Sbjct: 8 RRCRSWR--------ELKAHAVIEVKVLLLEWKVVLFGLAWQYIHNIFHNIAYWMQTKL--SVAQRVPLYDLGFEL----LPELSESASHVSEYLVFGGIF---------------GPSIVLFVSVLFIKAXXXXXXXXXXXXXALIFKRVLLQTALCLMLRCISFMVTSLPGPASHCRPLYNQTCLDAFPSDPTASYRCVVGNPDFQPPMTVGSILGHVDALNGCGDLMFSSHTTYTMSMILAVWKYWGSVPVLVVMLVLQVVTAFFIVAA----RKHYSLDVIS 260
BLAST of NO28G01790 vs. NCBI_GenBank
Match: XP_008871059.1 (hypothetical protein H310_07470 [Aphanomyces invadans] >ETW00034.1 hypothetical protein H310_07470 [Aphanomyces invadans]) HSP 1 Score: 83.2 bits (204), Expect = 2.000e-12 Identity = 68/275 (24.73%), Postives = 115/275 (41.82%), Query Frame = 0 Query: 122 AIRLKTPKEISWQAKLEFALFKQEWRWIVVVLLAEYFNLVMHNFVYYLEGEIWGEAGPPPPLKDLGIMLFAGVFPPSAQWVVNLSLYLLVGMVLTLCLGRLLLNNVPWGGPQTMLVQEREDWEEVKTCSIPVPFVYLCKRACQVLSIALVLRVFSYMLTLEPNPAPYCHP------------------------PYWDPPNTVGEIMGRVEITGSCGDLLFSSHTLHSIVMLLTV---LRHAPRLYIVCGISVCSMILVIMALLAFKNHYSHDIV 370 A R ++ E+ E + EW+ ++ L +Y + + HN Y+++ ++ PL DLG L P + ++S YL+ G + GP +L + + P F + KR ++ L+LR S+M+T P PA +C P P + PP T G I G V+ CGDL+FSSHT +++ M+L V R P L ++ + + + ++ A + HYS D++ Sbjct: 7 ASRCRSWSELKAHVVFEVKVLLLEWKALLFGLAWQYIHNIFHNTAYWMQSKL--SLAQRMPLYDLGFEL----LPELTESEAHVSEYLVFGGIF---------------GPSILLFVSVLVIKPSSPSAPPRFFSLIAKRVLLQTALCLMLRCISFMVTSLPGPAAHCRPTFNQTCIDAFPNDPSASFRCVVPNPDFQPPMTAGTIFGHVDALNGCGDLMFSSHTTYTLSMILAVWKYWRSVPLLVLMLVLQIITAFFIVAA----RKHYSLDVI 256
BLAST of NO28G01790 vs. NCBI_GenBank
Match: XP_002907552.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY64116.1 conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 82.4 bits (202), Expect = 3.500e-12 Identity = 68/255 (26.67%), Postives = 113/255 (44.31%), Query Frame = 0 Query: 136 KLEFALFKQEWRWIVVVLLAEYFNLVMHNFVYYLEGEIWGEAGPPPPLKDLGIMLFAGVFPPSAQWVVNLSLYLLVGMVLTLCLGRLLLNNVPWGGPQTMLVQEREDWEEVKTCSIPVPFVYLCKRACQVLSIALVLRVFSYMLTLEPNPAPYCHPPYWD--------------------PPNTVGEIMGRVEITGSCGDLLFSSHTLHSIVMLLTVLRHAPRLYIVCGISVCSMILVIMALL--AFKNHYSHDI 369 K+E L +EW+ I+ + +Y + + HN YY++ + L DLG L + W +LS L+ + + +L T+ + +E P V KR LSI LV R S+++T P PA +C + D P T+GE+ R++ CGDL+FSSHT++++ +LTV ++ P Y GIS+ ++ + +A L A + HY+ D+ Sbjct: 18 KIELQLLAREWKIILPCVFMQYAHAIFHNLAYYIQAH-YLSTEQRFTLHDLGYELMGEL----TGWASDLSDILVFATIFAPAIALVL----------TIPLFRQEPGR-------PRYLVITLKRCLLQLSICLVFRCISFLVTALPGPADHCELKFNDTCLAANPDDPVPCVVPNPEFTPPTIGELFTRLDSLNGCGDLMFSSHTIYTVSFILTVWKYWPNKY---GISIMVLVQITIAFLIVASRKHYTLDV 247
BLAST of NO28G01790 vs. NCBI_GenBank
Match: XP_002769449.1 (conserved hypothetical protein [Perkinsus marinus ATCC 50983] >EER02167.1 conserved hypothetical protein [Perkinsus marinus ATCC 50983]) HSP 1 Score: 81.6 bits (200), Expect = 5.900e-12 Identity = 57/235 (24.26%), Postives = 104/235 (44.26%), Query Frame = 0 Query: 134 QAKLEFALFKQEWRWIVVVLLAEYFNLVMHNFVYYLEGEIWGEAGPPPPLKDLGIMLFAG-----VFPPSAQWVVNLSLYLLVGMVLTLCLGRLLLNNVPWGGPQTMLVQEREDWEEVKTCSIPVPFVYLCKRACQVLSIALVLRVFSYMLTLEPNPAPYCH---------PPYWDPPNTVGEIMGRVEITGSCGDLLFSSHTLHSIVMLLTVLRHAPRL------YIVCGISVC 349 ++++E+ +FK W WIV+ ++ + + HN+VYYL G+ GP L D G M F V P V+ ++L V V+ + +R+D+ + R V ++ R S+++T+ P PAP+C P++ PP + G+++ ++ CGDL+FSSH ++ ++ L V ++ L +++C VC Sbjct: 175 KSRIEWEVFKVAWPWIVIGIIFQILHDWAHNWVYYLSGKYNVYGGPENALVDFGHMAFPDIDTLTVSPAPENPVLYTCMFLAVAFVVI-----------------APIFGDRDDF----------TLIGAIWRVLNVCDFTILFRCISFLVTILPAPAPHCQEAPPPNAPLEPFFSPPTSAGQVLSGFDVQNGCGDLVFSSHMMYCLLATLVVTHYSRSLVLMVIEWLLCCALVC 382 The following BLAST results are available for this feature:
BLAST of NO28G01790 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO28G01790 ID=NO28G01790|Name=NO28G01790|organism=Nannochloropsis oceanica|type=gene|length=2523bpback to top protein sequence of NO28G01790.1 >NO28G01790.1-protein ID=NO28G01790.1-protein|Name=NO28G01790.1|organism=Nannochloropsis oceanica|type=polypeptide|length=408bpback to top protein sequence of NO28G01790.2 >NO28G01790.2-protein ID=NO28G01790.2-protein|Name=NO28G01790.2|organism=Nannochloropsis oceanica|type=polypeptide|length=402bpback to top Synonyms
Publications
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