NO28G01780, NO28G01780 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO28G01780 vs. NCBI_GenBank
Match: XP_005855873.1 (20S proteasome subunit alpha 7 [Nannochloropsis gaditana CCMP526] >EKU20482.1 20S proteasome subunit alpha 7 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 475.7 bits (1223), Expect = 1.700e-130 Identity = 234/261 (89.66%), Postives = 253/261 (96.93%), Query Frame = 0 Query: 224 MSSTGAGYDVSPTTFSPDGRLFQVEYASKAVENSGTAIGLKCKDGIVLAVENLLLSKLLVANSNRRTFGVGPHVSIAVAGLVSDGRQVVNRAREEAENYKDNYGSDIPPSVLADRLAQFVHFFTLNYSLRPFGASVLIAGYDAFMEALELHVIEPSGVAYKFFGAAVGKGRQGAKTEIEKLKLTETTCTDAIKEMAKILHKLHDESKDKPFELEMAWVTEANGFKAQTVPRDVVAAAEKWAKEAIEAEDMDESDDEEGGAA 485 MSSTGAGYDVSPTTFSPDGRLFQVEYA KAVENSGTAIGLKCKDG++LAVENL+LSKLLV+NSNRRT+ VG H+SIAVAGLVSDGRQVVNRAREEAENYKDNYGSD+PP++LADRLAQFVH+FTLNYSLRPFGASVLIAG+DAF +++ELHVIEPSGVAYKFFGAA+GKGRQGAKTEIEKLKLTETTC DA+KEMAKILHKLHDESKDKPFELEMAWVT ANG+KAQ VPRD+VAAAEKWAKEAIEAEDMDESD+EEGG A Sbjct: 1 MSSTGAGYDVSPTTFSPDGRLFQVEYAGKAVENSGTAIGLKCKDGVILAVENLMLSKLLVSNSNRRTYNVGSHISIAVAGLVSDGRQVVNRAREEAENYKDNYGSDMPPTILADRLAQFVHYFTLNYSLRPFGASVLIAGHDAFTDSIELHVIEPSGVAYKFFGAALGKGRQGAKTEIEKLKLTETTCDDAVKEMAKILHKLHDESKDKPFELEMAWVTAANGYKAQRVPRDIVAAAEKWAKEAIEAEDMDESDEEEGGTA 261
BLAST of NO28G01780 vs. NCBI_GenBank
Match: EWM20632.1 (proteasome subunit alpha type 3 [Nannochloropsis gaditana]) HSP 1 Score: 427.9 bits (1099), Expect = 4.100e-116 Identity = 208/234 (88.89%), Postives = 227/234 (97.01%), Query Frame = 0 Query: 224 MSSTGAGYDVSPTTFSPDGRLFQVEYASKAVENSGTAIGLKCKDGIVLAVENLLLSKLLVANSNRRTFGVGPHVSIAVAGLVSDGRQVVNRAREEAENYKDNYGSDIPPSVLADRLAQFVHFFTLNYSLRPFGASVLIAGYDAFMEALELHVIEPSGVAYKFFGAAVGKGRQGAKTEIEKLKLTETTCTDAIKEMAKILHKLHDESKDKPFELEMAWVTEANGFKAQTVPRDVV 458 MSSTGAGYDVSPTTFSPDGRLFQVEYA KAVENSGTAIGLKCKDG++LAVENL+LSKLLV+NSNRRT+ VG H+SIAVAGLVSDGRQVVNRAREEAENYKDNYGSD+PP++LADRLAQFVH+FTLNYSLRPFGASVLIAG+DAF +++EL+VIEPSGVAYKFFGAA+GKGRQGAKTEIEKLKLTETTC DA+KEMAKILHKLHDESKDKPFELEMAWVT ANG+KAQ VPRD+V Sbjct: 1 MSSTGAGYDVSPTTFSPDGRLFQVEYAGKAVENSGTAIGLKCKDGVILAVENLMLSKLLVSNSNRRTYNVGSHISIAVAGLVSDGRQVVNRAREEAENYKDNYGSDMPPTILADRLAQFVHYFTLNYSLRPFGASVLIAGHDAFTDSIELNVIEPSGVAYKFFGAALGKGRQGAKTEIEKLKLTETTCDDAVKEMAKILHKLHDESKDKPFELEMAWVTAANGYKAQRVPRDIV 234
BLAST of NO28G01780 vs. NCBI_GenBank
Match: CBN75335.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 355.5 bits (911), Expect = 2.600e-94 Identity = 170/255 (66.67%), Postives = 216/255 (84.71%), Query Frame = 0 Query: 224 MSSTGAGYDVSPTTFSPDGRLFQVEYASKAVENSGTAIGLKCKDGIVLAVENLLLSKLLVANSNRRTFGVGPHVSIAVAGLVSDGRQVVNRAREEAENYKDNYGSDIPPSVLADRLAQFVHFFTLNYSLRPFGASVLIAGYDAFMEALELHVIEPSGVAYKFFGAAVGKGRQGAKTEIEKLKLTETTCTDAIKEMAKILHKLHDESKDKPFELEMAWVTEANGFKAQTVPRDVVAAAEKWAKEAIEAEDMDESDD 479 MSSTGAGYD+S TTFSPDG++FQVEYA+KAVENSGTA+G++CKDG++LAVE LL+SK+LVA SNRR GV HV +AVAGL +D RQ+V R R+E Y +NYGS +PPS+LADRLAQ+VH+FTL+ SLRPFGASVL+AGYD ++ EL+V+EPSGV Y++FGAAVGKGRQ AKTE+EKLK + TC +A+K++ KILH LHDE+KDKPFELEM+WV E +G+K Q VP+ V AE+WAKE+IE+++MD+ +D Sbjct: 1 MSSTGAGYDLSATTFSPDGKIFQVEYATKAVENSGTAMGVRCKDGVLLAVEKLLISKMLVAGSNRRVHGVSKHVGMAVAGLSADARQIVYRGRDEVAGYIENYGSQMPPSMLADRLAQYVHYFTLHGSLRPFGASVLVAGYDVELKKHELYVVEPSGVMYRYFGAAVGKGRQAAKTEMEKLKFDDMTCKEAMKQVCKILHVLHDEAKDKPFELEMSWVCEESGWKYQAVPQAQVKEAEEWAKESIESDEMDDDED 255
BLAST of NO28G01780 vs. NCBI_GenBank
Match: XP_009040513.1 (hypothetical protein AURANDRAFT_55034 [Aureococcus anophagefferens] >EGB04777.1 hypothetical protein AURANDRAFT_55034 [Aureococcus anophagefferens]) HSP 1 Score: 317.4 bits (812), Expect = 7.700e-83 Identity = 150/243 (61.73%), Postives = 198/243 (81.48%), Query Frame = 0 Query: 224 MSSTGAGYDVSPTTFSPDGRLFQVEYASKAVENSGTAIGLKCKDGIVLAVENLLLSKLLVANSNRRTFGVGPHVSIAVAGLVSDGRQVVNRAREEAENYKDNYGSDIPPSVLADRLAQFVHFFTLNYSLRPFGASVLIAGYDAFMEALELHVIEPSGVAYKFFGAAVGKGRQGAKTEIEKLKLTETTCTDAIKEMAKILHKLHDESKDKPFELEMAWVTEANGFKAQTVPRDVVAAAEKWAKE 467 M+STGAGYD+SPTTFSPDGR+FQVEYA+KAVEN+GT +G+KCKDG+VL VE ++LSK+L+ +SNRR V H +A AGL +DGRQVV RAREE +NY++ YG IPP+VLA RL+++VH+FT++ +LRPFG S +IA YD +A +L+V+EP+GV ++FGAA+GKGRQ AK+EIEKL LT TC DA+KE+AK+++ +DESKDKPF LEMAW+ E F+ Q VP+D++ AAE WAK+ Sbjct: 1 MASTGAGYDLSPTTFSPDGRIFQVEYATKAVENAGTVVGMKCKDGVVLGVEKVMLSKMLLPSSNRRVATVSAHAGVAQAGLAADGRQVVARAREECDNYEEVYGIPIPPTVLAQRLSEYVHYFTIHGALRPFGTSTMIAAYDEREKAHQLYVLEPTGVCLRYFGAALGKGRQSAKSEIEKLDLTTLTCRDALKEIAKMIYTCYDESKDKPFILEMAWLCEETKFEYQLVPQDLIDAAETWAKK 243
BLAST of NO28G01780 vs. NCBI_GenBank
Match: GAX97263.1 (Hypothetical protein PINS_005096 [Pythium insidiosum]) HSP 1 Score: 309.7 bits (792), Expect = 1.600e-80 Identity = 151/257 (58.75%), Postives = 202/257 (78.60%), Query Frame = 0 Query: 224 MSSTGAGYDVSPTTFSPDGRLFQVEYASKAVENSGTAIGLKCKDGIVLAVENLLLSKLLVANSNRRTFGVGPHVSIAVAGLVSDGRQVVNRAREEAENYKDNYGSDIPPSVLADRLAQFVHFFTLNYSLRPFGASVLIAGYDAFMEALELHVIEPSGVAYKFFGAAVGKGRQGAKTEIEKLKLTETTCTDAIKEMAKILHKLHDESKDKPFELEMAWVTEANGFKAQTVPRDVVAAAEKWAKEAIEAEDMDESDDEE 481 MSSTGAGYD S TFSP+GR+FQVEYA KAVENSGTAIG+KCKDG+++ VE LLSK+LV ++RR + V H+ +++AGLV+DGRQ+V+RAREEA +YK NYGS +PP VLA+R+ Q++H++TL S+RPFG S++IAGYDA + LH+IEPSGV Y + G A+GKG+Q AKTEIEK KL + TC +A+K +AKIL+KLH+E + PFELE++W+ E ++ Q VP ++ +WAK+AIE E+M + DDEE Sbjct: 1795 MSSTGAGYDWSAGTFSPEGRIFQVEYAKKAVENSGTAIGIKCKDGVIMGVEKTLLSKMLVPGTHRRIYAVDRHIGLSMAGLVADGRQLVSRAREEALSYKKNYGSAVPPHVLAERMGQYIHYYTLYGSVRPFGTSIMIAGYDADEKKTTLHMIEPSGVTYSYRGCAIGKGQQAAKTEIEKDKLFDMTCREAMKYVAKILNKLHEEVR-HPFELELSWLCEETNWQHQLVPDNLRDEVNQWAKQAIEDEEMGDDDDEE 2050
BLAST of NO28G01780 vs. NCBI_GenBank
Match: GAQ86485.1 (20S proteasome regulatory subunit alpha protein [Klebsormidium nitens]) HSP 1 Score: 308.9 bits (790), Expect = 2.800e-80 Identity = 152/252 (60.32%), Postives = 198/252 (78.57%), Query Frame = 0 Query: 224 MSSTGAGYDVSPTTFSPDGRLFQVEYASKAVENSGTAIGLKCKDGIVLAVENLLLSKLLVANSNRRTFGVGPHVSIAVAGLVSDGRQVVNRAREEAENYKDNYGSDIPPSVLADRLAQFVHFFTLNYSLRPFGASVLIAGYDAFMEALELHVIEPSGVAYKFFGAAVGKGRQGAKTEIEKLKLTETTCTDAIKEMAKILHKLHDESKDKPFELEMAWVTEANGFKAQTVPRDVVAAAEKWAKEAIEAEDMDE 476 MSS G GYD+S TTFSPDGR+FQ EYA+KAV+NSGTA+G++CKDGIVL VE L++SK+LV SNRR V H+ +A AGLV+DGRQ+VNRAR EA NYK YG IP V+ADR+A FVH +TL +S+RPFG+SVL+ YD E +L+ IEP+G++++FFG A+GKGRQ AKTEIEKLKL+E TC + + +AKI++ +HDE+KDK FELE++W+ E +G + + VP DV+A AE+ AK A E EDMD+ Sbjct: 1 MSSIGTGYDLSSTTFSPDGRVFQTEYATKAVDNSGTAVGIRCKDGIVLGVEKLVISKMLVEGSNRRILSVDRHIGVATAGLVADGRQIVNRARAEASNYKTFYGDAIPGQVIADRVATFVHLYTLYWSVRPFGSSVLLGVYD--KEGPQLYAIEPTGISHRFFGTAIGKGRQAAKTEIEKLKLSEMTCREGVTAVAKIIYGVHDEAKDKAFELELSWICEESGREHKRVPADVLAEAERLAKAAQE-EDMDD 249
BLAST of NO28G01780 vs. NCBI_GenBank
Match: EJK76103.1 (hypothetical protein THAOC_02158 [Thalassiosira oceanica]) HSP 1 Score: 308.5 bits (789), Expect = 3.600e-80 Identity = 150/267 (56.18%), Postives = 205/267 (76.78%), Query Frame = 0 Query: 224 MSSTGAGYDVSPTTFSPDGRLFQVEYASKAVENSGTAIGLKCKDGIVLAVENLLLSKLLVA-NSNRRTFGVGPHVSIAVAGLVSDGRQVVNRAREEAENYKDNYGSDIPPSVLADRLAQFVHFFTLNYSLRPFGASVLIAGYDAFMEALELHVIEPSGVAYKFFGAAVGKGRQGAKTEIEKLKLTE---------TTCTDAIKEMAKILHKLHDESKDKPFELEMAWVTEANGFKAQTVPRDVVAAAEKWAKEAIEAEDMDESDDEE 481 M+S+G+GYD+S TFSPDGR+FQVEYA+KAVEN+GTA+GLKC+DG+V+AVE L +K+LVA + RR V H +A+ G VSDGRQ++NRAREEA NY++ YG+ IPP LA RL+ +VH+FTL+ +LRPFGAS L+A YD ++ LH++EPSG++Y+++GAA G+GRQ A+TE+EKL + TC + +K++AKI++ L+DESKDKPFELEM+W+ E +G+K VPRD +AAA +WAK+ IE DESDDE+ Sbjct: 1 MASSGSGYDLSSATFSPDGRIFQVEYAAKAVENAGTALGLKCRDGVVMAVEKPLQNKMLVAKTTGRRIHTVDEHSGVAITGFVSDGRQIINRAREEASNYEETYGTKIPPKTLAQRLSTYVHYFTLHGALRPFGASTLVASYDPATKSHSLHMVEPSGISYEYYGAAAGRGRQPARTEMEKLAINPKHNEGEAELITCEEGVKQLAKIIYTLYDESKDKPFELEMSWLCEGSGWKHAGVPRDTIAAAVEWAKQQIE----DESDDED 263
BLAST of NO28G01780 vs. NCBI_GenBank
Match: XP_008872949.1 (hypothetical protein H310_08821 [Aphanomyces invadans] >ETV98752.1 hypothetical protein H310_08821 [Aphanomyces invadans]) HSP 1 Score: 307.4 bits (786), Expect = 8.000e-80 Identity = 153/256 (59.77%), Postives = 200/256 (78.12%), Query Frame = 0 Query: 224 MSSTGAGYDVSPTTFSPDGRLFQVEYASKAVENSGTAIGLKCKDGIVLAVENLLLSKLLVANSNRRTFGVGPHVSIAVAGLVSDGRQVVNRAREEAENYKDNYGSDIPPSVLADRLAQFVHFFTLNYSLRPFGASVLIAGYDAFMEALELHVIEPSGVAYKFFGAAVGKGRQGAKTEIEKLKLTETTCTDAIKEMAKILHKLHDESKDKPFELEMAWVTEANGFKAQTVPRDVVAAAEKWAKEAIEAEDMDESDDE 480 MSSTGAGYD+S TFSPDGR+FQVEYA KAVENSGTAIG+ CKDG+V+ VE +LLSKLLV ++RR + HV +A++GLV+DGRQ+VNRAREEA +YK NYGS IPP +LADR++Q+VH++TL S+RPFG S+++AG D L+VIEPSGV+Y+F GAA+GKG Q AKTEIEK KL + TC +AIK +AKIL+ LHDE K PFELE++W+ E + ++ Q VP ++ A WA ++I+ +DM + DD+ Sbjct: 325 MSSTGAGYDLSAGTFSPDGRIFQVEYAKKAVENSGTAIGINCKDGVVMGVEKILLSKLLVPGTHRRIHAIDRHVGLAISGLVADGRQLVNRAREEAASYKKNYGSPIPPQMLADRMSQYVHYYTLYGSVRPFGTSIMLAGRDVDTGKTFLNVIEPSGVSYRFRGAAMGKGEQAAKTEIEKYKLFDLTCREAIKYIAKILNVLHDEVK-HPFELELSWLCEESNWQHQLVPANIRDDATAWALQSIQDDDMADDDDD 579
BLAST of NO28G01780 vs. NCBI_GenBank
Match: OQS07191.1 (proteasome subunit alpha type-3 [Thraustotheca clavata]) HSP 1 Score: 305.1 bits (780), Expect = 4.000e-79 Identity = 153/256 (59.77%), Postives = 198/256 (77.34%), Query Frame = 0 Query: 224 MSSTGAGYDVSPTTFSPDGRLFQVEYASKAVENSGTAIGLKCKDGIVLAVENLLLSKLLVANSNRRTFGVGPHVSIAVAGLVSDGRQVVNRAREEAENYKDNYGSDIPPSVLADRLAQFVHFFTLNYSLRPFGASVLIAGYDAFMEALELHVIEPSGVAYKFFGAAVGKGRQGAKTEIEKLKLTETTCTDAIKEMAKILHKLHDESKDKPFELEMAWVTEANGFKAQTVPRDVVAAAEKWAKEAIEAEDMDESDDE 480 MSSTGAGYD+S TFSPDGR+FQVEYA KAVE+SGTAIG+ C DG+V+ VE +LLSK+LV ++RR V HV +A+AGLV+DGRQ+VNRAREEA YK NYGS IPP +LADR++Q+VH+FTL S+RPFG S+++AG D L+VIEPSGV+Y+F G A+GKG Q AKTEIEK K+ + TC +AIK +AKIL+ LHDE K PFELE++W+ E + ++ Q VP ++ AA WA ++IE ++M + DDE Sbjct: 1 MSSTGAGYDLSAGTFSPDGRIFQVEYAKKAVESSGTAIGIHCTDGVVMGVEKILLSKMLVPGTHRRIHAVDRHVGLAMAGLVADGRQLVNRAREEASGYKKNYGSAIPPQILADRMSQYVHYFTLYGSVRPFGTSIMLAGRDVDTGKCYLNVIEPSGVSYRFRGCAMGKGEQAAKTEIEKYKIFDMTCREAIKYIAKILNVLHDEVK-HPFELELSWLCEESKWQHQLVPDNIRDAANAWALQSIEEDEMADDDDE 255
BLAST of NO28G01780 vs. NCBI_GenBank
Match: XP_008606342.1 (20S proteasome subunit alpha 7 [Saprolegnia diclina VS20] >EQC39868.1 20S proteasome subunit alpha 7 [Saprolegnia diclina VS20]) HSP 1 Score: 301.2 bits (770), Expect = 5.700e-78 Identity = 150/255 (58.82%), Postives = 198/255 (77.65%), Query Frame = 0 Query: 224 MSSTGAGYDVSPTTFSPDGRLFQVEYASKAVENSGTAIGLKCKDGIVLAVENLLLSKLLVANSNRRTFGVGPHVSIAVAGLVSDGRQVVNRAREEAENYKDNYGSDIPPSVLADRLAQFVHFFTLNYSLRPFGASVLIAGYDAFMEALELHVIEPSGVAYKFFGAAVGKGRQGAKTEIEKLKLTETTCTDAIKEMAKILHKLHDESKDKPFELEMAWVTEANGFKAQTVPRDVVAAAEKWAKEAIEAEDMDESDD 479 MSSTGAGYD+S TFSPDGR+FQVEYA KAVE+SGTAIG+ C DG+V+ VE +LLSK+LV ++RR + HV +A+AGLV+DGRQ+VNRAREEA +YK NYGS IPP VLADR++Q+VH+FTL S+RPFG S+++AG D L+VIEPSGV+Y+F G A+GKG Q AKTEIEK K+ + TC +AIK +AKIL+ LHDE K PFELE++W+ E + ++ Q VP ++ A WA ++I+A++M + D+ Sbjct: 1 MSSTGAGYDLSVGTFSPDGRIFQVEYAKKAVESSGTAIGIHCTDGVVMGVEKILLSKMLVPGTHRRVHAIDRHVGLAMAGLVADGRQLVNRAREEASSYKKNYGSPIPPQVLADRMSQYVHYFTLYGSVRPFGTSIMLAGRDVDTGKCYLNVIEPSGVSYRFRGCAMGKGEQAAKTEIEKYKIFDMTCREAIKYIAKILNVLHDEVK-HPFELELSWLCEESKWQHQLVPDNIRDEATAWALQSIQADEMADDDE 254 The following BLAST results are available for this feature:
BLAST of NO28G01780 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO28G01780 ID=NO28G01780|Name=NO28G01780|organism=Nannochloropsis oceanica|type=gene|length=4661bpback to top protein sequence of NO28G01780.2 >NO28G01780.2-protein ID=NO28G01780.2-protein|Name=NO28G01780.2|organism=Nannochloropsis oceanica|type=polypeptide|length=458bpback to top protein sequence of NO28G01780.1 >NO28G01780.1-protein ID=NO28G01780.1-protein|Name=NO28G01780.1|organism=Nannochloropsis oceanica|type=polypeptide|length=485bpback to top Synonyms
Publications
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