NO28G01750, NO28G01750 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO28G01750
Unique Name	NO28G01750
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2718
Alignment location	chr28:547289..550006 -

Link to JBrowse

Properties


Property Name	Value
Description	Rhodanese-like domain-containing protein 6

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr28	genome	chr28:547289..550006 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
PRJNA769958	2024-08-13
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR036873	Rhodanese-like_dom_sf
IPR022111	Rhodanese_C
IPR001763	Rhodanese-like_dom

Homology

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BLAST of NO28G01750 vs. NCBI_GenBank
Match: GAQ88930.1 (hypothetical protein KFL_004700120 [Klebsormidium nitens])

HSP 1 Score: 248.1 bits (632), Expect = 6.400e-62
Identity = 161/399 (40.35%), Postives = 202/399 (50.63%), Query Frame = 0

Query:   96 ILACWYEETCSALGLKGRVRVAWDGVNATLGGSMHALQQHILAVRAHPLLALPPSHDGGAREGGREGGKAEIDMKLA-LNEGGARNEQCRRETGFDRLRVTRCQEVVSLGPRAAAASSSFPPSPHFSPLQFHQ-CLAQASRGGRERGREGGREDMVLLDARNLYESRVGYF-EAPGVPCLRPSIRQFSDLPAWLEEEEGREGGREDGHGSSSAFSSLKNKDTKILMYCTGGVRCERASAFLQAR--GYRKVVQLQGGIQRYLEAFPDGGFFQGKNFVFDERVTVAPAGGQEGGWEGGRVCAGMLPPGLMPSGGGHENPPSLPPPCPPSFLSPPFPRKDVVGRCLGCARPWDDYGSRHRCLQCRMLLLICKGCEEEGREGXXXXGWCCEQCVERGGQVEA 490
            ++  WYE+ C++LGL GR+RV+ +GVN T+GGS  AL++HI  V +HP L                      D K+A   E    N    +E GF+ L V   +EVVSLG  A+ A+S+     H SP  FHQ  LA A+R   + GR  G   +V+LDARN+YE+R+G F + PGV    P IRQFSDLPAWL+  E R                L NK   + MYCTGGVRCERASA+L+ +  G+R V QL GGIQRYLEAFP+GG F GKNFVFD RV V                                                    K  VGRCL C  P+DDY  R RC QCR+L+L+C  C    RE      + CE C + G +  A
Sbjct:   30 LIVKWYEDLCTSLGLVGRIRVSPEGVNVTIGGSTVALEEHIEQVCSHPSL-------------------GSCDFKVAHCVEPLLANPVLVQECGFESLSVRAVKEVVSLGNVASHATSAV-AGTHLSPTDFHQHLLAAATRQAEDVGRPSG--GVVVLDARNVYETRIGRFQQLPGVEFCDPRIRQFSDLPAWLDANEDR----------------LLNK--HVYMYCTGGVRCERASAYLRVKGPGFRNVYQLSGGIQRYLEAFPEGGLFAGKNFVFDPRVAVGST------------------------------------------------NKRKVGRCLLCQSPFDDYSPRCRCSQCRLLVLVCGDC----RERTESAAYVCELCQDAGAETRA 336

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BLAST of NO28G01750 vs. NCBI_GenBank
Match: XP_005646856.1 (Phospholipase/Carboxylesterase family protein [Coccomyxa subellipsoidea C-169] >EIE22312.1 Phospholipase/Carboxylesterase family protein [Coccomyxa subellipsoidea C-169])

HSP 1 Score: 246.9 bits (629), Expect = 1.400e-61
Identity = 164/433 (37.88%), Postives = 213/433 (49.19%), Query Frame = 0

Query:  100 WYEETCSALGLKGRVRVAWDGVNATLGGSMHALQQHILAVRAHPLLALPPSHDGGAREGGREGGKAEIDMKLALNEGGARNEQCRRETGFDRLRVTRCQEVVSLGPRAAAASSSFPPSP--HFSPLQFHQCLAQASRGGRERGREGGREDMVLLDARNLYESRVGYFEAPGVPCLRPSIRQFSDLPAWLEEEEGREGGREDGHGSSSAFSSLKNKDTKILMYCTGGVRCERASAFLQARG--YRKVVQLQGGIQRYLEAFPDGGFFQGKNFVFDERVTVAPAGGQEGGWEGGRVCAGMLPPGLMPSGGGHENPPSLPPPCPPSFLSPPFPRKDVVGRCLGCARPWDDYGSRHRCLQCRMLLLICKGCEEEGREGXXXXGWCCEQCVERGGQVEAEESEGQTKGGGRCRRRRRAGKG-GKTCAGIRSPSPIMEP 528
            W +  C  LGL+GR+RVA DG+N T+GG+M AL+ HI  V  HPLL                   + ID KLA +  G  + Q  RETGFD L VT CQEVV+LG            +   H SP QFH  L Q+         E   ++ VLLD RNLYE+RVG+F+  GV  + P +R F++L AWL+ +             ++A +     D ++LMYCTGGVRCERASA+L+++G  ++ V QL+GGIQRY+EAFP GG+F G+NFVFDERVTVA   G+                                                VVG C  CA P D Y  R RC  CRML+L+C  C   G +G       CE C  R  Q E   + G T     C+++   G      C  + S SP  +P
Sbjct:   28 WMQNLCQNLGLRGRIRVARDGINTTVGGTMAALRDHIAGVERHPLLG------------------SGIDFKLA-SSPGPSSSQAARETGFDSLAVTVCQEVVALGGSTQMDLEELKEATALHVSPQQFHSLLDQSV--------EDSTKETVLLDVRNLYETRVGHFDKDGVRLVDPQLRSFNELRAWLDCQ-------------AAALA-----DRRVLMYCTGGVRCERASAYLRSKGPAFQDVYQLEGGIQRYMEAFPLGGYFAGRNFVFDERVTVAGGSGR------------------------------------------------VVGSCCMCAAPHDTYEPRCRCGHCRMLVLVCPTCASHGLDGIEI---LCELC-RRRAQCEVVHN-GCTASCRNCQQQDSGGPAHSSQCRCVTSGSPPRQP 362

[Close]

BLAST of NO28G01750 vs. NCBI_GenBank
Match: GAX74875.1 (hypothetical protein CEUSTIGMA_g2321.t1 [Chlamydomonas eustigma])

HSP 1 Score: 235.0 bits (598), Expect = 5.600e-58
Identity = 149/408 (36.52%), Postives = 211/408 (51.72%), Query Frame = 0

Query:   97 LACWYEETCSALGLKGRVRVAWDGVNATLGGSMHALQQHILAVRAHPLLALPPSHDGGAREGGREGGKAEIDMKLALNEGG-ARNEQCRRETGFDRLRVTRCQEVVSLGPRAAAASSSFP-PSPHFSPLQFHQCLAQASRGGRERGRE-----GGREDMVLLDARNLYESRVGYFEAPGVPCLRPSIRQFSDLPAWLEEEEGREGGREDGHGSSSAFSSLKNKDTKILMYCTGGVRCERASAFLQAR--GYRKVVQLQGGIQRYLEAFPDGGFFQGKNFVFDERVTVAPA----------GGQEGGWEGGRVCAGMLPPGLM----PSGGGH----ENPPSL---------------------------PPPCPPSFLSPPFPRK-DVVGRCLGCARPWDDYGSRHRC 450
            + C++ + C  L LKGR+RVA DG+N T+GG    +++H+ AVR+HPLL                     ID KLALN    + ++    ETGF+ L V  C+E+V++GP A   ++     + H  P +FH  L   +  G+E GR+        ++ V++D RN+YE+++G+F   G+P L P  R FSDLPAWL+++E +  G+                  +I+MYCTGGVRCERASA+L+ +  G++ V QL+GGIQRYLEA+ + GFF+GKNFV+D+R+ V P+          G Q+   EG R    +LP  +M    P  G       NP +L                              CPPS      P   +VVGRC  C  PWDDYG R RC
Sbjct:   37 MGCFFSDNCKYLDLKGRIRVAEDGINVTVGGLEDNIKRHVEAVRSHPLLR-----------------GCNIDFKLALNPAATSASDAASAETGFNTLSVRICKELVTMGPLAQGRANPLENAATHLKPAEFHGMLTSVTTHGKELGRDFQEGVDAHKETVIIDVRNMYETQIGHFHVEGIPLLDPRTRCFSDLPAWLDKQEEKLRGK------------------RIMMYCTGGVRCERASAYLKEKGAGFQDVYQLEGGIQRYLEAYGERGFFKGKNFVYDDRIAVGPSNTASSVPEHVGHQDLPVEGRR---AVLPEQVMKRPVPFSGSQTDDCRNPDALNAVHGQDLVNPQEVLGKDSHHIAIPHDTASCPPSSSCCMQPAAVEVVGRCALCENPWDDYGLRARC 406

[Close]

BLAST of NO28G01750 vs. NCBI_GenBank
Match: XP_020172809.1 (rhodanese-like domain-containing protein 6 [Aegilops tauschii subsp. tauschii])

HSP 1 Score: 231.1 bits (588), Expect = 8.000e-57
Identity = 147/394 (37.31%), Postives = 196/394 (49.75%), Query Frame = 0

Query:   97 LACWYEETCSALGLKGRVRVAWDGVNATLGGSMHALQQHILAVRAHPLLALPPSHDGGAREGGREGGKAEIDMKLALNEGGARNEQCRRETGFDRLRVTRCQEVVSL--GPRAAAASSSFPPSPHFSPLQFHQCLAQASRGGRERGREGGREDMVLLDARNLYESRVGYFEAPGVPCLRPSIRQFSDLPAWLEEEEGREGGREDGHGSSSAFSSLKNKDTKILMYCTGGVRCERASAFLQAR--GYRKVVQLQGGIQRYLEAFPDGGFFQGKNFVFDERVTVAPAGGQEGGWEGGRVCAGMLPPGLMPSGGGHENPPSLPPPCPPSFLSPPFPRKDVVGRCLGCARPWDDYGSRHRCLQCRMLLLICKGCEEEGREGXXXXGWCCEQCVERGGQ 487
            LA +YE  C AL L GRVRV  DGVNATLGG + AL++HI  + ++ L       DG              D KLA  E    +E+  RE GF  L V   +E+V+L   P       SF    H S  +FH  L Q+   G +     G+ D+V+LDARNLYE+R+G F  P V  L P IRQ+SDLP W++E   +  G+                   I+MYCTGG+RCE ASA+++++  G+  V QL GGIQRYLE +PDGG+F GKNFVFD R++V                           G   +N                     ++G CL C   +DDY SR RC  CRML+L+C  C++  +E      + CE C++ G Q
Sbjct:   45 LAAFYESRCRALALVGRVRVGPDGVNATLGGRVAALEKHIDEMSSNSLF------DG-------------TDFKLASCEEPV-DERVARECGFTSLSVRLVKELVTLCSNPSLTTPDISF-AGRHLSAAEFHSVL-QSVGTGSDTEAPAGQNDVVVLDARNLYETRIGKFHVPNVETLHPEIRQYSDLPLWIDEHTEKLRGK------------------SIMMYCTGGIRCEMASAYIRSKGEGFENVFQLYGGIQRYLEQYPDGGYFDGKNFVFDHRISV---------------------------GSNKDN---------------------ILGTCLVCGSTYDDYSSRCRCSNCRMLVLVCSTCQDSTKE------YVCELCLKNGKQ 344

[Close]

BLAST of NO28G01750 vs. NCBI_GenBank
Match: XP_010237152.1 (rhodanese-like domain-containing protein 6 isoform X3 [Brachypodium distachyon] >KQJ86304.1 hypothetical protein BRADI_4g04567v3 [Brachypodium distachyon])

HSP 1 Score: 229.6 bits (584), Expect = 2.300e-56
Identity = 148/410 (36.10%), Postives = 196/410 (47.80%), Query Frame = 0

Query:   97 LACWYEETCSALGLKGRVRVAWDGVNATLGGSMHALQQHILAVRAHPLLALPPSHDGGAREGGREGGKAEIDMKLALNEGGARNEQCRRETGFDRLRVTRCQEVVSLGPRAAAASSSFP-PSPHFSPLQFHQCLAQASRGGRERGREGGREDMVLLDARNLYESRVGYFEAPGVPCLRPSIRQFSDLPAWLEEEEGREGGREDGHGSSSAFSSLKNKDTKILMYCTGGVRCERASAFLQAR--GYRKVVQLQGGIQRYLEAFPDGGFFQGKNFVFDERVTVAPAGGQEGGWEGGRVCAGMLPPGLMPSGGGHENPPSLPPPCPPSFLSPPFPRKDVVGRCLGCARPWDDYGSRHRCLQCRMLLLICKGCEEEGREGXXXXGW-----CCEQCVERGGQVEAEESEGQTKG 499
            LA +YE  C AL L GRVRV  DGVNATLGG M AL++HI  + ++ L       DG              D KLA  E    +E+  RE GF  L V   +E+V+L    +  +        H S   FH  L   +  G        + ++V+LDARNLYE+R+G F  P V  L P IRQ+SDLP W++E                   S K +   I+MYCTGG+RCE ASA+++++  G+  V QL GGIQRYLE FPDGG+F GKNFVFD R++V                 G L                               + +++G CL C   +DDY SR RC  CR+L+L+C  C++  +E            CC+  V + GQ E E SE    G
Sbjct:   42 LAAFYEARCRALALVGRVRVGPDGVNATLGGRMAALEKHIEEMSSNSLF------DG-------------TDFKLASCEEPV-DERVARECGFTSLSVRLVKELVTLCSNPSLTTPEISLAGRHLSAADFHSVLQSVAGTGSYSEASAEKNEVVVLDARNLYETRIGKFHVPNVETLHPEIRQYSDLPLWIDEH------------------SEKLRGKSIMMYCTGGIRCEMASAYIRSKGEGFENVFQLYGGIQRYLEQFPDGGYFDGKNFVFDHRISV-----------------GSL-------------------------------KDNILGTCLICGSTYDDYSSRCRCTHCRILVLVCSTCQDSTKEYVCELCLRNGKPCCQISVRQDGQTETELSESSAFG 365

[Close]

BLAST of NO28G01750 vs. NCBI_GenBank
Match: XP_024318817.1 (rhodanese-like domain-containing protein 6 isoform X1 [Brachypodium distachyon])

HSP 1 Score: 229.6 bits (584), Expect = 2.300e-56
Identity = 148/410 (36.10%), Postives = 196/410 (47.80%), Query Frame = 0

Query:   97 LACWYEETCSALGLKGRVRVAWDGVNATLGGSMHALQQHILAVRAHPLLALPPSHDGGAREGGREGGKAEIDMKLALNEGGARNEQCRRETGFDRLRVTRCQEVVSLGPRAAAASSSFP-PSPHFSPLQFHQCLAQASRGGRERGREGGREDMVLLDARNLYESRVGYFEAPGVPCLRPSIRQFSDLPAWLEEEEGREGGREDGHGSSSAFSSLKNKDTKILMYCTGGVRCERASAFLQAR--GYRKVVQLQGGIQRYLEAFPDGGFFQGKNFVFDERVTVAPAGGQEGGWEGGRVCAGMLPPGLMPSGGGHENPPSLPPPCPPSFLSPPFPRKDVVGRCLGCARPWDDYGSRHRCLQCRMLLLICKGCEEEGREGXXXXGW-----CCEQCVERGGQVEAEESEGQTKG 499
            LA +YE  C AL L GRVRV  DGVNATLGG M AL++HI  + ++ L       DG              D KLA  E    +E+  RE GF  L V   +E+V+L    +  +        H S   FH  L   +  G        + ++V+LDARNLYE+R+G F  P V  L P IRQ+SDLP W++E                   S K +   I+MYCTGG+RCE ASA+++++  G+  V QL GGIQRYLE FPDGG+F GKNFVFD R++V                 G L                               + +++G CL C   +DDY SR RC  CR+L+L+C  C++  +E            CC+  V + GQ E E SE    G
Sbjct:   42 LAAFYEARCRALALVGRVRVGPDGVNATLGGRMAALEKHIEEMSSNSLF------DG-------------TDFKLASCEEPV-DERVARECGFTSLSVRLVKELVTLCSNPSLTTPEISLAGRHLSAADFHSVLQSVAGTGSYSEASAEKNEVVVLDARNLYETRIGKFHVPNVETLHPEIRQYSDLPLWIDEH------------------SEKLRGKSIMMYCTGGIRCEMASAYIRSKGEGFENVFQLYGGIQRYLEQFPDGGYFDGKNFVFDHRISV-----------------GSL-------------------------------KDNILGTCLICGSTYDDYSSRCRCTHCRILVLVCSTCQDSTKEYVCELCLRNGKPCCQISVRQDGQTETELSESSAFG 365

[Close]

BLAST of NO28G01750 vs. NCBI_GenBank
Match: BAK05916.1 (predicted protein [Hordeum vulgare subsp. vulgare])

HSP 1 Score: 228.4 bits (581), Expect = 5.200e-56
Identity = 145/394 (36.80%), Postives = 196/394 (49.75%), Query Frame = 0

Query:   97 LACWYEETCSALGLKGRVRVAWDGVNATLGGSMHALQQHILAVRAHPLLALPPSHDGGAREGGREGGKAEIDMKLALNEGGARNEQCRRETGFDRLRVTRCQEVVSL--GPRAAAASSSFPPSPHFSPLQFHQCLAQASRGGRERGREGGREDMVLLDARNLYESRVGYFEAPGVPCLRPSIRQFSDLPAWLEEEEGREGGREDGHGSSSAFSSLKNKDTKILMYCTGGVRCERASAFLQAR--GYRKVVQLQGGIQRYLEAFPDGGFFQGKNFVFDERVTVAPAGGQEGGWEGGRVCAGMLPPGLMPSGGGHENPPSLPPPCPPSFLSPPFPRKDVVGRCLGCARPWDDYGSRHRCLQCRMLLLICKGCEEEGREGXXXXGWCCEQCVERGGQ 487
            LA +YE  C AL L GRVRV  DGVNATLGG M AL++HI  + ++ L       DG              D KLA  E    +++  RE GF  L V   +E+V+L   P        F    H S  +FH  L Q+     +     G+ D+V+LDARNLYE+R+G F  P V  L P IRQ+SDLP W++E   +  G+                   I+MYCTGG+RCE ASA+++++  G+  V QL GGIQRYLE +PDGG+F GKNFVFD R++V            GR+                                    + +++G CL C   +DDY SR RC  CRML+L+C  C++  +E      + CE C++ G Q
Sbjct:   41 LAAFYESRCRALALVGRVRVGPDGVNATLGGRMAALEKHIKEMSSNSLF------DGA-------------DFKLASCEDPV-DDRVARECGFTSLSVRLVKELVTLCSNPSLTTPDIKF-AGRHLSAAEFHSVL-QSVGTCLDTEAPAGQNDVVVLDARNLYETRIGKFHVPNVETLHPEIRQYSDLPLWIDEHTEKLRGK------------------SIMMYCTGGIRCEMASAYIRSKGEGFENVFQLYGGIQRYLEQYPDGGYFDGKNFVFDHRISV------------GRI------------------------------------KDNILGTCLICGSTYDDYSSRCRCSHCRMLVLVCSTCQDSTKE------YVCELCLKNGKQ 340

[Close]

BLAST of NO28G01750 vs. NCBI_GenBank
Match: PSC70407.1 (rhodanese-like domain-containing 6 isoform X1 [Micractinium conductrix])

HSP 1 Score: 228.4 bits (581), Expect = 5.200e-56
Identity = 170/440 (38.64%), Postives = 211/440 (47.95%), Query Frame = 0

Query:   97 LACWYEETCSALGLKGRVRVAWDGVNATLGGSMHALQQHILAVRAHPLLALPPSHDGGAREGGREGGKAEIDMKLALNEGGARNEQCRRETGFDRLRVTRCQEVVSLG-------PR----AAAASSSFPPS-----------PHFSPLQFHQCLAQASRGGRERGREGGREDMVLLDARNLYESRVGYFEAPGVPCLRPSIRQFSDLPAWLEEEEGREGGREDGHGSSSAFSSLKNKDTKILMYCTGGVRCERASAFLQARG--YRKVVQLQGGIQRYLEAFPDGGFFQGKNFVFDERVTVAPAGGQEGGWEGGRVCAGMLPPGLMPSGGGHENPPSLPPPCPPSFLSPPFPRKDVVGRCLGCARPWDDYGSRHRCLQCRMLLLICKGCE-----EEGR----EGXXXXGWCCEQCVERGGQVEAEESEGQTKGGGRCR 504
            +A W E   + LGL GR+RVA DG+NATLGG++ AL+ H  AV A           G A++G        ID KLA + G A +      + FDRL V +  EVVSLG       PR     +   SS   S            H  P +FH  LA A+    + G+ GG+   VL+DARNLYE+ +G F+AP V  + P +R FSD P WLE  + R  GR                   ILM CTGGVRCERASA++++ G  ++ VVQL+GGIQRYLEAFPDGGFF+G+ FVFDER  V                           GGG E                      VVGRC  CA P   Y  R RC  CRMLLL+C GC+       G+     G    G  C+ C +R  QVEA  +     GG R R
Sbjct:   56 VAAWIEALSTQLGLVGRIRVALDGLNATLGGTLGALRTHAAAVEA---------RFGSAKQG------PAIDFKLAASHGRA-SAAAAAGSAFDRLTVQQVTEVVSLGVLDWLPQPRREDDGSGTCSSCDVSGDVAGLLPAGARHVEPAEFHALLAAAA---ADAGQPGGKAP-VLIDARNLYETAIGRFKAPAVEPMDPRVRCFSDTPQWLEANQHRLAGR------------------PILMCCTGGVRCERASAYVKSLGPSFQDVVQLKGGIQRYLEAFPDGGFFKGQLFVFDERGAV---------------------------GGGDE----------------------VVGRCASCATPCSHYLHRWRCADCRMLLLVCDGCDGATHSSAGKPVAPPGANPAGLRCDLCQQR--QVEAGAATTTASGGRRLR 406

[Close]

BLAST of NO28G01750 vs. NCBI_GenBank
Match: XP_003579150.1 (rhodanese-like domain-containing protein 6 isoform X4 [Brachypodium distachyon] >KQJ86306.1 hypothetical protein BRADI_4g04567v3 [Brachypodium distachyon])

HSP 1 Score: 228.0 bits (580), Expect = 6.800e-56
Identity = 148/410 (36.10%), Postives = 195/410 (47.56%), Query Frame = 0

Query:   97 LACWYEETCSALGLKGRVRVAWDGVNATLGGSMHALQQHILAVRAHPLLALPPSHDGGAREGGREGGKAEIDMKLALNEGGARNEQCRRETGFDRLRVTRCQEVVSLGPRAAAASSSFP-PSPHFSPLQFHQCLAQASRGGRERGREGGREDMVLLDARNLYESRVGYFEAPGVPCLRPSIRQFSDLPAWLEEEEGREGGREDGHGSSSAFSSLKNKDTKILMYCTGGVRCERASAFLQAR--GYRKVVQLQGGIQRYLEAFPDGGFFQGKNFVFDERVTVAPAGGQEGGWEGGRVCAGMLPPGLMPSGGGHENPPSLPPPCPPSFLSPPFPRKDVVGRCLGCARPWDDYGSRHRCLQCRMLLLICKGCEEEGREGXXXXGW-----CCEQCVERGGQVEAEESEGQTKG 499
            LA +YE  C AL L GRVRV  DGVNATLGG M AL++HI  + ++ L       DG              D KLA  E    +E+  RE GF  L V   +E+V+L    +  +        H S   FH  L     G         + ++V+LDARNLYE+R+G F  P V  L P IRQ+SDLP W++E                   S K +   I+MYCTGG+RCE ASA+++++  G+  V QL GGIQRYLE FPDGG+F GKNFVFD R++V                 G L                               + +++G CL C   +DDY SR RC  CR+L+L+C  C++  +E            CC+  V + GQ E E SE    G
Sbjct:   42 LAAFYEARCRALALVGRVRVGPDGVNATLGGRMAALEKHIEEMSSNSLF------DG-------------TDFKLASCEEPV-DERVARECGFTSLSVRLVKELVTLCSNPSLTTPEISLAGRHLSAADFHSVLQSVGTGSYSEA-SAEKNEVVVLDARNLYETRIGKFHVPNVETLHPEIRQYSDLPLWIDEH------------------SEKLRGKSIMMYCTGGIRCEMASAYIRSKGEGFENVFQLYGGIQRYLEQFPDGGYFDGKNFVFDHRISV-----------------GSL-------------------------------KDNILGTCLICGSTYDDYSSRCRCTHCRILVLVCSTCQDSTKEYVCELCLRNGKPCCQISVRQDGQTETELSESSAFG 364

[Close]

BLAST of NO28G01750 vs. NCBI_GenBank
Match: KQJ86305.1 (hypothetical protein BRADI_4g04567v3 [Brachypodium distachyon])

HSP 1 Score: 228.0 bits (580), Expect = 6.800e-56
Identity = 148/410 (36.10%), Postives = 195/410 (47.56%), Query Frame = 0

Query:   97 LACWYEETCSALGLKGRVRVAWDGVNATLGGSMHALQQHILAVRAHPLLALPPSHDGGAREGGREGGKAEIDMKLALNEGGARNEQCRRETGFDRLRVTRCQEVVSLGPRAAAASSSFP-PSPHFSPLQFHQCLAQASRGGRERGREGGREDMVLLDARNLYESRVGYFEAPGVPCLRPSIRQFSDLPAWLEEEEGREGGREDGHGSSSAFSSLKNKDTKILMYCTGGVRCERASAFLQAR--GYRKVVQLQGGIQRYLEAFPDGGFFQGKNFVFDERVTVAPAGGQEGGWEGGRVCAGMLPPGLMPSGGGHENPPSLPPPCPPSFLSPPFPRKDVVGRCLGCARPWDDYGSRHRCLQCRMLLLICKGCEEEGREGXXXXGW-----CCEQCVERGGQVEAEESEGQTKG 499
            LA +YE  C AL L GRVRV  DGVNATLGG M AL++HI  + ++ L       DG              D KLA  E    +E+  RE GF  L V   +E+V+L    +  +        H S   FH  L     G         + ++V+LDARNLYE+R+G F  P V  L P IRQ+SDLP W++E                   S K +   I+MYCTGG+RCE ASA+++++  G+  V QL GGIQRYLE FPDGG+F GKNFVFD R++V                 G L                               + +++G CL C   +DDY SR RC  CR+L+L+C  C++  +E            CC+  V + GQ E E SE    G
Sbjct:   42 LAAFYEARCRALALVGRVRVGPDGVNATLGGRMAALEKHIEEMSSNSLF------DG-------------TDFKLASCEEPV-DERVARECGFTSLSVRLVKELVTLCSNPSLTTPEISLAGRHLSAADFHSVLQSVGTGSYSEA-SAEKNEVVVLDARNLYETRIGKFHVPNVETLHPEIRQYSDLPLWIDEH------------------SEKLRGKSIMMYCTGGIRCEMASAYIRSKGEGFENVFQLYGGIQRYLEQFPDGGYFDGKNFVFDHRISV-----------------GSL-------------------------------KDNILGTCLICGSTYDDYSSRCRCTHCRILVLVCSTCQDSTKEYVCELCLRNGKPCCQISVRQDGQTETELSESSAFG 364

The following BLAST results are available for this feature:

BLAST of NO28G01750 vs. NCBI_GenBank

BLAST of NO28G01750 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
GAQ88930.1	6.400e-62	40.35	hypothetical protein KFL_004700120 [Klebsormidium ...	[more]
XP_005646856.1	1.400e-61	37.88	Phospholipase/Carboxylesterase family protein [Coc...	[more]
GAX74875.1	5.600e-58	36.52	hypothetical protein CEUSTIGMA_g2321.t1 [Chlamydom...	[more]
XP_020172809.1	8.000e-57	37.31	rhodanese-like domain-containing protein 6 [Aegilo...	[more]
XP_010237152.1	2.300e-56	36.10	rhodanese-like domain-containing protein 6 isoform...	[more]
XP_024318817.1	2.300e-56	36.10	rhodanese-like domain-containing protein 6 isoform...	[more]
BAK05916.1	5.200e-56	36.80	predicted protein [Hordeum vulgare subsp. vulgare]	[more]
PSC70407.1	5.200e-56	38.64	rhodanese-like domain-containing 6 isoform X1 [Mic...	[more]
XP_003579150.1	6.800e-56	36.10	rhodanese-like domain-containing protein 6 isoform...	[more]
KQJ86305.1	6.800e-56	36.10	hypothetical protein BRADI_4g04567v3 [Brachypodium...	[more]

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Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
ncniR087	ncniR087	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR101	ngnoR101	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO28G01750.1	NO28G01750.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
Naga_101233g1	gene9769	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO28G01750.1	NO28G01750.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO28G01750 ID=NO28G01750|Name=NO28G01750|organism=Nannochloropsis oceanica|type=gene|length=2718bp
ATGGAGCCAACCTCGGAGGAAGAAAAAATAGACATTCGCCCCGCCATCCT
GCTCTACTATGCCTACCTCCCCCTCTCCTCCTCCTCCTCCCCTTCCTCCT
CCTCCTGCTCCTCTTTATTCTCCTCCTCTTCCTGCTCCTCCAATCCTCCT
TCCTCCTCTACCACCACATTCACGATAGCGGAGAAGAAAAATCAGCCCCC
TATGTCGCTCTCTCCTTCCCACCAGCGGAAAGAGGAGAGGGGGAGGAAGG
GAAGGAAGGAGGGTGAAGAGGAGGACAAGCGGGAAATCCTGGCCTGCTGG
TACGAAGAGACATGCAGCGCCTTGGGCCTGAAGGGCCGCGTCCGAGTGGC
TTGGGATGGAGTGAACGCTACGCTAGgtgaggcacggagggtaggtggga
gggagggagggaaggagggagtaggggagggagtggctagggtggttgag
cggggagagacgattcgaatgatgcctaggggagggagggagggagggat
agaaggaggacggatgggcgggaacgaagggtgtggcatggagtgagtgg
tatgccgggtgtggagggacggagggaaggaaggaaggagggaaggaggg
agggatggaaggctcgataagaagggagcgaatgggcgaccttcctctct
cttctcaccctccctccctccctcccaccttccctccctccccagGCGGA
AGCATGCACGCACTCCAGCAGCACATCCTTGCTGTCCGTGCCCACCCCTT
ACTCGCTCTCCCTCCCTCCCATGATGGAGGCGCGAGGGAGGGAGGAAGGG
AGGGAGGGAAGGCGGAGATCGACATGAAGCTGGCTCTGAATGAGGGAGGG
GCACGGAACGAACAATGTCGAAGAGAGACGGGTTTCGACAGGCTGAGGGT
GACTAGGTGCCAGGAGgtgagagacgagggagggagggagggagggaggg
agagaggaagatgtggcagagaacctggccgtgcttactttttgggagag
agagactacaatctcacaatctcctctctctccttcctttcctccctcgc
tccctccctccctccccccttctctcccttattctctctctccctccctc
cctccctggcttcctccctccttccctccctccctccctccttcccttcc
cttccctttccagGTGGTCTCTCTAGGCCCACGCGCGGCCGCCGCCTCTT
CCTCCTTCCCTCCCTCCCCCCACTTCTCCCCCCTCCAGTTCCACCAATGC
CTTGCCCAGGCCAGCAGAGGAGGGAGGGAGAGAGGGAGGGAGGGAGGGAG
GGAGGACATGGTCCTTTTGGACGCGCGGAATTTGTATGAGAGTCGTGTCG
Ggtgagttcggccctggaggctccctcactccctccctccctccctcctg
ccaccttccactctgcgctccatttctttctttccccccgtcctccctcc
cttcttccctccctccctccctcccttcctctctccctccccagCTACTT
CGAGGCTCCCGGCGTCCCCTGTCTCCGTCCGTCCATCCGACAGTTCTCCG
ACCTCCCCGCTTGGCTCGAAGAGGAGGAAGGGAGGGAAGGGGGGAGGGAG
GACGGGCACGGGTCCTCCTCGGCTTTTTCCTCGCTCAAGAATAAGGACAC
AAAGgtgtgtgatgttttgctccctcccttcctccctccctcccttcccc
gtctacgaatcaacatcgaccaccccttccctccctctttccctcagATC
CTCATGTACTGCACGGGCGGCGTGCGGTGTGAGCGAGCCAGCGCCTTCCT
CCAAGCCAGGGGCTACAGGAAGGTGGTGCAGCTGCAGGgtgagggcgggc
tggagggagggagggcgggagggttggggaagtctcatccttgaaaaacg
cctagagaaatgaccgcgcataacctatacctgcctcgttccctccctcc
ttccctccctccctccttccctccctccctcggtccttagGCGGCATACA
GCGCTACCTTGAGGCCTTCCCCGACGGTGGCTTCTTCCAGGGCAAGAATT
TTGTCTTTGATGAGAGAGTCACCGTGGCGCCCGCCGGAGGGCAGGAGGGG
GGGTGGGAGGGAGGGCGGGTGTGTGCAGGAATGCTGCCGCCGGGATTAAT
GCCGAGTGGGGGAGGACATGAAAATCCTCCCTCCCTCCCTCCCCCTTGCC
CCCCTTCATTCCTCTCTCCCCCCTTCCCTCGCAAGGACGTGGTGGGAAGG
TGCTTGGGATGTGCTCGGCCGTGGGATGACTATGGGAGCCGACACCGTTG
TCTTCAGTGTCGTATGCTGCTCTTGATTTGCAAAGGGTGTGAGGAGGAGG
GGAGGGAGGGAGGAAGGGAAGGGGGGTGGTGTTGCGAGCAGTGCGTGGAG
AGGGGAGGGCAGGTAGAGGCAGAGGAGTCAGAGGGACAGACGAAGGGGGG
AGGGAGGTGTCGGAGGAGAAGAAGGGCAGGGAAGGGAGGGAAGACATGCG
CAGGAATCAGGTCTCCAAGTCCGATTATGGAACCGGCGATGGGTGAGGAG
GAATGAGGCGTTCTCTTGTCCTGATTTCACCGGCAAGAGGAGAGGTGGGC
GTTCCGAAAGCAACAAACCAGATGCATGCATAGATGTCATCTCATTGAGT
ACCCTTAACTGTGAGCAAAATACAGAAACAACATCAATAAAGAAGAAGAA
CAGCAATAACAAGAACAA

protein sequence of NO28G01750.1

>NO28G01750.1-protein ID=NO28G01750.1-protein|Name=NO28G01750.1|organism=Nannochloropsis oceanica|type=polypeptide|length=534bp
MEPTSEEEKIDIRPAILLYYAYLPLSSSSSPSSSSCSSLFSSSSCSSNPP
SSSTTTFTIAEKKNQPPMSLSPSHQRKEERGRKGRKEGEEEDKREILACW
YEETCSALGLKGRVRVAWDGVNATLGGSMHALQQHILAVRAHPLLALPPS
HDGGAREGGREGGKAEIDMKLALNEGGARNEQCRRETGFDRLRVTRCQEV
VSLGPRAAAASSSFPPSPHFSPLQFHQCLAQASRGGRERGREGGREDMVL
LDARNLYESRVGYFEAPGVPCLRPSIRQFSDLPAWLEEEEGREGGREDGH
GSSSAFSSLKNKDTKILMYCTGGVRCERASAFLQARGYRKVVQLQGGIQR
YLEAFPDGGFFQGKNFVFDERVTVAPAGGQEGGWEGGRVCAGMLPPGLMP
SGGGHENPPSLPPPCPPSFLSPPFPRKDVVGRCLGCARPWDDYGSRHRCL
QCRMLLLICKGCEEEGREGGREGGWCCEQCVERGGQVEAEESEGQTKGGG
RCRRRRRAGKGGKTCAGIRSPSPIMEPAMGEEE*

Synonyms

Publications