NO28G01740, NO28G01740 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO28G01740 vs. NCBI_GenBank
Match: XP_005852718.1 (peroxiredoxin 5, atypical 2-Cys peroxiredoxin [Nannochloropsis gaditana CCMP526] >EKU23114.1 peroxiredoxin 5, atypical 2-Cys peroxiredoxin [Nannochloropsis gaditana CCMP526] >EWM26023.1 peroxiredoxin-2e- chloroplastic [Nannochloropsis gaditana]) HSP 1 Score: 168.3 bits (425), Expect = 2.400e-38 Identity = 88/157 (56.05%), Postives = 104/157 (66.24%), Query Frame = 0 Query: 48 GSKLPL-TTTFQHLADGKPTDVPALELFAGKKIVLVGVPGALTPTCSNTHVPGYIAKAADFKAKGVDDIIVLAVNDCFAMRAWEKTFET-DKVKFYADGGASFTKAAGLEFDTGDFGGLRMQRMSALVEDGVVKKIHLEGGGGLSS-SAADVLLGEL 202 G LPL TF+ L DGK TD+ +LF GKK+VL GVPGA TPTC+NTH P Y+A FKAKGVD I +A NDCF AW K+ + DKV ADG F K GL +TG FGGLR+ R SALVEDG VKK+HLE GGG + S A+ +L +L Sbjct: 7 GQTLPLEKITFKVLKDGKATDLTGTDLFKGKKVVLFGVPGAFTPTCTNTHAPEYLAMYESFKAKGVDAIYCIASNDCFVTSAWAKSLDAGDKVSILADGDCGFAKLVGLTVETGGFGGLRLSRFSALVEDGSVKKLHLEEGGGYTGVSGAEQMLKDL 163
BLAST of NO28G01740 vs. NCBI_GenBank
Match: XP_014160806.1 (hypothetical protein SARC_00949 [Sphaeroforma arctica JP610] >KNC86904.1 hypothetical protein SARC_00949 [Sphaeroforma arctica JP610]) HSP 1 Score: 166.8 bits (421), Expect = 7.000e-38 Identity = 86/158 (54.43%), Postives = 108/158 (68.35%), Query Frame = 0 Query: 45 IDVGSKLPLTTTFQHLADGKPTDVPALELFAGKKIVLVGVPGALTPTCSNTHVPGYIAKAADFKAKGVDDIIVLAVNDCFAMRAWEKTF-ETDKVKFYADGGASFTKAAGLEFDTGDFGGLRMQRMSALVEDGVVKKIHLEGGGGLSSSAADVLLGEL 202 + VG K+P TF+ + DG PTDVP E+F GKK+V++GVPGA TPTCSN+H+PGYI K A+ K KGVD II L+VNDCF M AW K T KV YADGGA++ KAA L D GDFGG R QR S +VE+G +K +++E S A +L +L Sbjct: 22 VKVGDKIP-AGTFKIIRDGAPTDVPTSEVFDGKKVVVLGVPGAFTPTCSNSHLPGYIEKDAEIKNKGVDSIICLSVNDCFVMDAWSKDVGATGKVDLYADGGATWHKAADLAQDLGDFGGPRAQRYSMVVENGEIKSLNVEPAAADQCSFAPNILKQL 178
BLAST of NO28G01740 vs. NCBI_GenBank
Match: CAQ52405.1 (peroxyredoxin [Laminaria digitata]) HSP 1 Score: 164.1 bits (414), Expect = 4.600e-37 Identity = 83/158 (52.53%), Postives = 106/158 (67.09%), Query Frame = 0 Query: 43 MTIDVGSKLPLTTTFQHLADGKPTDVPALELFAGKKIVLVGVPGALTPTCSNTHVPGYIAKAADFKAKGVDDIIVLAVNDCFAMRAWEKTFE-TDKVKFYADGGASFTKAAGLEFDTGDFGGLRMQRMSALVEDGVVKKIHLEGGGGLS--SSAADVL 198 M I G K P T+FQ L DG P DVPA ++FAGKK+V+ GVPGA TPTCS+ H+P +IA A +FKAKGVD + L+VND F M W K+ + DKV ADGG F + +GL TG FGG R+QR++ +V DG ++K+ LE G G + SS A VL Sbjct: 1 MAIKEGDKFPAGTSFQILGDGGPADVPAADVFAGKKVVICGVPGAFTPTCSDDHLPSFIALADEFKAKGVDTVACLSVNDAFVMSRWIKSLDAADKVTMLADGGGVFAEESGLCVKTGKFGGTRLQRLAMIVNDGTIEKLFLEDGTGYTDLSSGAGVL 158
BLAST of NO28G01740 vs. NCBI_GenBank
Match: WP_035598756.1 (peroxiredoxin [Hyphomonas polymorpha] >KCZ98244.1 anti-oxidant AhpCTSA family protein [Hyphomonas polymorpha PS728]) HSP 1 Score: 158.3 bits (399), Expect = 2.500e-35 Identity = 84/161 (52.17%), Postives = 102/161 (63.35%), Query Frame = 0 Query: 43 MTIDVGSKLPLTTTFQHLADGKPTDVPALELFAGKKIVLVGVPGALTPTCSNTHVPGYIAKAADFKAKGVDDIIVLAVNDCFAMRAWEKTFETD-KVKFYADGGASFTKAAGLEFDTGDFG-GLRMQRMSALVEDGVVKKIHLEGGGGLSSSAADVLLGEL 202 M I VG KLP T + DG P V E+F GK + L VPGA TPTCS H+PGY+ KA DFK KGVDDI+ +VND F M AW K+ D KV+ ADG +F +A GLE D FG G R QR S LV+DGVV ++++E GG S+AD LLG+L Sbjct: 1 MAIKVGDKLPEATFMEMTVDG-PKPVTTAEVFGGKTVALFAVPGAYTPTCSARHLPGYVDKAGDFKTKGVDDIVCTSVNDVFVMGAWGKSSHADEKVRMLADGNGAFAQALGLELDASGFGMGKRSQRYSMLVKDGVVAELNVEAGGEFKVSSADYLLGQL 160
BLAST of NO28G01740 vs. NCBI_GenBank
Match: WP_055778337.1 (peroxiredoxin [Sphingomonas sp. Leaf357] >KQS04493.1 alkyl hydroperoxide reductase [Sphingomonas sp. Leaf357]) HSP 1 Score: 156.4 bits (394), Expect = 9.500e-35 Identity = 79/160 (49.38%), Postives = 105/160 (65.62%), Query Frame = 0 Query: 43 MTIDVGSKLPLTTTFQHLADGKPTDVPALELFAGKKIVLVGVPGALTPTCSNTHVPGYIAKAADFKAKGVDDIIVLAVNDCFAMRAWEKTFETDKVKFYADGGASFTKAAGLEFDTGDFG-GLRMQRMSALVEDGVVKKIHLEGGGGLSSSAADVLLGEL 202 MTI VG K+P +TT + + P V + + FAG+K+ LV VPGA TPTCS H+PG++ KA++ KAKGVD+I +VND F M AW K + ++ ADG A F KA GL FD FG G R QR S +V DGVV+++H+E G + S+A+ LLGEL Sbjct: 1 MTIGVGDKIP-STTITKVTESGPEQVSSEDYFAGRKVALVAVPGAFTPTCSARHLPGFVDKASELKAKGVDEIAFTSVNDAFVMGAWGKASDAGEITMLADGNADFAKAVGLTFDGSKFGMGERSQRYSMIVNDGVVEQLHVEAPGEFNVSSAEYLLGEL 159
BLAST of NO28G01740 vs. NCBI_GenBank
Match: WP_105934226.1 (peroxiredoxin [Alteromonas sp. 190] >OUY03315.1 peroxiredoxin [Alteromonadaceae bacterium TMED7] >PRO73978.1 peroxiredoxin [Alteromonas sp. 190]) HSP 1 Score: 156.4 bits (394), Expect = 9.500e-35 Identity = 81/157 (51.59%), Postives = 102/157 (64.97%), Query Frame = 0 Query: 45 IDVGSKLPLTTTFQHLADGKPTDVPALELFAGKKIVLVGVPGALTPTCSNTHVPGYIAKAADFKAKGVDDIIVLAVNDCFAMRAWEKTFETDKVKFYADGGASFTKAAGLEFDTGDFGGLRMQRMSALVEDGVVKKIHLEGGGGLSSSAADVLLGEL 202 IDVGS LP TF + DGK T ELF+GK++VL VPGA TPTCS H+PGY+A A KAKGVD II L+VND + M AW K+ +++ ADG A FTK+ GL+ +T DFGG+R R S LVEDG V K+++E G S A+ +L L Sbjct: 2 IDVGSTLP-EVTFGLMKDGKMTSPHTNELFSGKRVVLFAVPGAFTPTCSEAHLPGYVALADKIKAKGVDSIICLSVNDAYVMNAWGKSANANEILMVADGNAFFTKSIGLDMNTSDFGGIRSVRYSMLVEDGEVVKLNVEDPGRFEVSDAESMLKSL 157
BLAST of NO28G01740 vs. NCBI_GenBank
Match: OYW42428.1 (peroxiredoxin [Rhodobacterales bacterium 12-64-8]) HSP 1 Score: 156.4 bits (394), Expect = 9.500e-35 Identity = 83/161 (51.55%), Postives = 107/161 (66.46%), Query Frame = 0 Query: 43 MTIDVGSKLPLTTTFQHLADGKPTDVPALELFAGKKIVLVGVPGALTPTCSNTHVPGYIAKAADFKAKGVDDIIVLAVNDCFAMRAWEKTFET-DKVKFYADGGASFTKAAGLEFDTGDFG-GLRMQRMSALVEDGVVKKIHLEGGGGLSSSAADVLLGEL 202 MTI VG KLP TF + +GKP+ + +L AGKK+ L VPGA TPTCS H+PGY KAA+F+AKGVD I ++VND F M AW K+ + + V ADG +F KA GLE D FG G R +R S ++EDGVVK++++EG G SAAD +LG+L Sbjct: 1 MTIQVGDKLP-EATFTVMKEGKPSPLTIADLTAGKKVALFAVPGAFTPTCSARHLPGYKEKAAEFRAKGVDTIACVSVNDVFVMDAWGKSQQVGEDVVMLADGNGAFAKAVGLEMDGSGFGMGSRSKRYSMIIEDGVVKQLNVEGPGEFKVSAADFMLGQL 160
BLAST of NO28G01740 vs. NCBI_GenBank
Match: OZA94701.1 (peroxiredoxin [Erythrobacter sp. 34-65-8]) HSP 1 Score: 156.4 bits (394), Expect = 9.500e-35 Identity = 83/160 (51.88%), Postives = 104/160 (65.00%), Query Frame = 0 Query: 43 MTIDVGSKLPLTTTFQHLADGKPTDVPALELFAGKKIVLVGVPGALTPTCSNTHVPGYIAKAADFKAKGVDDIIVLAVNDCFAMRAWEKTFETDKVKFYADGGASFTKAAGLEFDTGDFG-GLRMQRMSALVEDGVVKKIHLEGGGGLSSSAADVLLGEL 202 MTI VG KLP T + +G P V + E FAGKK+ L VPGA TPTCS H+PGY+ KAA+ KAKGVD+I+ AVND F M AW K ++ + ADG A F +A GL D FG G R QR S +VEDGVVK++++E G S S+A+ LLG+L Sbjct: 1 MTISVGDKLPDVTLIKATEEG-PQKVQSSEYFAGKKVALFSVPGAFTPTCSARHLPGYVDKAAELKAKGVDEIVATAVNDPFVMGAWNKAAGSEDITMLADGNAEFAEALGLTMDGSGFGLGKRGQRFSMVVEDGVVKELNVEAPGDFSVSSAEHLLGQL 159
BLAST of NO28G01740 vs. NCBI_GenBank
Match: CBN78919.1 (Peroxyredoxin [Ectocarpus siliculosus]) HSP 1 Score: 155.6 bits (392), Expect = 1.600e-34 Identity = 90/204 (44.12%), Postives = 122/204 (59.80%), Query Frame = 0 Query: 4 LSYAALALAACASQTLA--FVPAGPLSGMASSSKSRLHATK--MTIDVGSKLPLTTTFQHLADGKPTDVPALELFAGKKIVLVGVPGALTPTCSNTHVPGYIAKAADFKAKGVDDIIVLAVNDCFAMRAWEKTFET-DKVKFYADGGASFTKAAGLEFDTGDFGGLRMQRMSALVEDGVVKKIHLEGGGGLSS-SAADVLLGEL 202 +S A A+ C + A FV A G + +S A++ M I G K P+ +TFQ D P DVPA E+FAGKK+V+ GVPGA TPTC + H+P +IA A FK KGVD + ++VND F M W K+ + DKV ADGGA F + +GL TG FGG R+QR++ +V DG ++K+ LE G G + S+ D +L L Sbjct: 3 MSVLARAVGGCVALRSAQGFV-ASSAVGRTTGVRSIHQASRLAMAIKEGDKFPMDSTFQIKGDAGPADVPASEIFAGKKVVICGVPGAFTPTCDDNHLPSFIANADKFKEKGVDTVACMSVNDAFVMSRWIKSLDAEDKVTMLADGGAVFAEESGLCVKTGKFGGTRLQRLAMIVNDGTIEKLFLEDGTGYTDVSSGDTVLAAL 205
BLAST of NO28G01740 vs. NCBI_GenBank
Match: WP_070177488.1 (peroxiredoxin [Alteromonas lipolytica] >OFI33111.1 peroxiredoxin [Alteromonas lipolytica]) HSP 1 Score: 155.6 bits (392), Expect = 1.600e-34 Identity = 79/157 (50.32%), Postives = 101/157 (64.33%), Query Frame = 0 Query: 45 IDVGSKLPLTTTFQHLADGKPTDVPALELFAGKKIVLVGVPGALTPTCSNTHVPGYIAKAADFKAKGVDDIIVLAVNDCFAMRAWEKTFETDKVKFYADGGASFTKAAGLEFDTGDFGGLRMQRMSALVEDGVVKKIHLEGGGGLSSSAADVLLGEL 202 IDVGS LP TF + DGK T +LF GK++V+ VPGA TPTCS H+PGY+A A KAKGVD II L+VND + M AW K+ +++ ADG A FTK+ GL+ +T DFGG+R R S LVEDG V K+++E G S A+ +L L Sbjct: 2 IDVGSTLP-EVTFGLMKDGKMTSPHTNDLFGGKRVVVFAVPGAFTPTCSEAHLPGYVALADKIKAKGVDSIICLSVNDAYVMDAWGKSANAEEILMVADGNAFFTKSIGLDMNTSDFGGIRSMRYSMLVEDGEVVKLNVEDPGRFEVSDAETMLNSL 157 The following BLAST results are available for this feature:
BLAST of NO28G01740 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO28G01740 ID=NO28G01740|Name=NO28G01740|organism=Nannochloropsis oceanica|type=gene|length=2177bpback to top protein sequence of NO28G01740.1 >NO28G01740.1-protein ID=NO28G01740.1-protein|Name=NO28G01740.1|organism=Nannochloropsis oceanica|type=polypeptide|length=202bpback to top Synonyms
Publications
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