NO28G01550, NO28G01550 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO28G01550 vs. NCBI_GenBank
Match: XP_005853390.1 (hypothetical protein NGA_0476010 [Nannochloropsis gaditana CCMP526] >EKU22972.1 hypothetical protein NGA_0476010 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 105.9 bits (263), Expect = 1.100e-19 Identity = 46/50 (92.00%), Postives = 50/50 (100.00%), Query Frame = 0 Query: 47 TSPTSCTYIFDSLWFCLSPVYQAKEYYISGDFDSCEEKASALYMCLSNKV 97 TSPTSCTYIFDSLWFCLSPVYQAKEYYISGDFD+CE+KASALYMCL+NK+ Sbjct: 61 TSPTSCTYIFDSLWFCLSPVYQAKEYYISGDFDACEDKASALYMCLANKM 110
BLAST of NO28G01550 vs. NCBI_GenBank
Match: XP_005854615.1 (hypothetical protein NGA_0476020, partial [Nannochloropsis gaditana CCMP526] >EKU21748.1 hypothetical protein NGA_0476020, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 105.5 bits (262), Expect = 1.400e-19 Identity = 46/49 (93.88%), Postives = 49/49 (100.00%), Query Frame = 0 Query: 47 TSPTSCTYIFDSLWFCLSPVYQAKEYYISGDFDSCEEKASALYMCLSNK 96 TSPTSCTYIFDSLWFCLSPVYQAKEYYISGDFD+CE+KASALYMCL+NK Sbjct: 61 TSPTSCTYIFDSLWFCLSPVYQAKEYYISGDFDACEDKASALYMCLANK 109
BLAST of NO28G01550 vs. NCBI_GenBank
Match: XP_020681455.1 (uncharacterized protein C227.17c isoform X1 [Dendrobium catenatum] >PKU65377.1 hypothetical protein MA16_Dca023980 [Dendrobium catenatum]) HSP 1 Score: 72.8 bits (177), Expect = 1.000e-9 Identity = 39/91 (42.86%), Postives = 54/91 (59.34%), Query Frame = 0 Query: 47 TSPTSCTYIFDSLWFCLSPVYQAKEYYISGDFDSCEEKASALYMCLSNKVKKDPDMDRKIEAKLKRKPIQPCWTKRGEGKGDEVEETAPVW 138 TS SCT FD+LWFC SP +Q ++YY G FDSC K S+L+ CLS K K+ ++++ ++A+ K K WT R VEE + W Sbjct: 22 TSRLSCTKYFDALWFCYSPFHQMEQYYRYGHFDSCSGKWSSLFDCLSLKTKRPDEVEKILQAREKSK--SHIWTYR------TVEEASENW 104
BLAST of NO28G01550 vs. NCBI_GenBank
Match: XP_009390014.1 (PREDICTED: uncharacterized protein C227.17c [Musa acuminata subsp. malaccensis]) HSP 1 Score: 70.1 bits (170), Expect = 6.500e-9 Identity = 38/87 (43.68%), Postives = 52/87 (59.77%), Query Frame = 0 Query: 51 SCTYIFDSLWFCLSPVYQAKEYYISGDFDSCEEKASALYMCLSNKVKKDPDMDRKIEAKLKRKPIQPCWTKRGEGKGDEVEETAPVW 138 SCT FD+LWFC SP +Q ++YY G+FD+C K +AL+ CL+ K KK ++ +EA+ K K Q WT R VEE + W Sbjct: 32 SCTKHFDALWFCYSPFHQVQQYYRHGEFDNCFGKWNALFDCLNLKTKKSSEVQEILEAREKAK--QHIWTIR------TVEEASVNW 110
BLAST of NO28G01550 vs. NCBI_GenBank
Match: XP_019161988.1 (PREDICTED: uncharacterized protein C227.17c-like [Ipomoea nil]) HSP 1 Score: 69.7 bits (169), Expect = 8.500e-9 Identity = 36/88 (40.91%), Postives = 52/88 (59.09%), Query Frame = 0 Query: 51 SCTYIFDSLWFCLSPVYQAKEYYISGDFDSCEEKASALYMCLSNKVKKDPDMDRKIEAKLKRKPIQPCWTKRGEGKGDEVEETAPVWE 139 SC+ FD+LWFC +PV+Q ++YY G D+C +K SALY CLS K K+ +++ +E + K KP W+ R EE A W+ Sbjct: 12 SCSACFDALWFCYTPVHQMQQYYRLGSLDNCSDKWSALYDCLSLKTKRQAEVEEILEKREKTKP--HIWSFR------TPEEAASHWQ 91
BLAST of NO28G01550 vs. NCBI_GenBank
Match: XP_020106910.1 (uncharacterized protein C227.17c isoform X1 [Ananas comosus] >XP_020106911.1 uncharacterized protein C227.17c isoform X1 [Ananas comosus] >XP_020106912.1 uncharacterized protein C227.17c isoform X1 [Ananas comosus] >XP_020106913.1 uncharacterized protein C227.17c isoform X1 [Ananas comosus] >XP_020106914.1 uncharacterized protein C227.17c isoform X1 [Ananas comosus]) HSP 1 Score: 69.7 bits (169), Expect = 8.500e-9 Identity = 38/91 (41.76%), Postives = 52/91 (57.14%), Query Frame = 0 Query: 47 TSPTSCTYIFDSLWFCLSPVYQAKEYYISGDFDSCEEKASALYMCLSNKVKKDPDMDRKIEAKLKRKPIQPCWTKRGEGKGDEVEETAPVW 138 T SCT FD+LWFC SP +Q ++YY G+FD+C K +AL+ CL+ K KK ++ +EA+ K KP W R VEE + W Sbjct: 17 TPTLSCTKCFDALWFCYSPFHQMQQYYRYGEFDTCFGKWNALFDCLTLKTKKSSEVKAILEAREKAKP--HIWMYR------TVEEASENW 99
BLAST of NO28G01550 vs. NCBI_GenBank
Match: XP_022859136.1 (uncharacterized protein C227.17c-like [Olea europaea var. sylvestris]) HSP 1 Score: 69.7 bits (169), Expect = 8.500e-9 Identity = 39/88 (44.32%), Postives = 50/88 (56.82%), Query Frame = 0 Query: 51 SCTYIFDSLWFCLSPVYQAKEYYISGDFDSCEEKASALYMCLSNKVKKDPDMDRKIEAKLKRKPIQPCWTKRGEGKGDEVEETAPVWE 139 SCT FD+LWFC SPV+Q ++YY GD D+C K +AL CLS K K+ ++ IE + K KP W R EE AP W+ Sbjct: 16 SCTTHFDALWFCYSPVHQMQQYYRLGDLDNCSGKWTALVYCLSLKTKRFSGVEEIIETREKTKP--HIWFFRSP------EEAAPHWK 95
BLAST of NO28G01550 vs. NCBI_GenBank
Match: XP_006366510.1 (PREDICTED: uncharacterized protein C227.17c [Solanum tuberosum] >XP_015160386.1 PREDICTED: uncharacterized protein C227.17c [Solanum tuberosum]) HSP 1 Score: 68.9 bits (167), Expect = 1.500e-8 Identity = 36/87 (41.38%), Postives = 50/87 (57.47%), Query Frame = 0 Query: 51 SCTYIFDSLWFCLSPVYQAKEYYISGDFDSCEEKASALYMCLSNKVKKDPDMDRKIEAKLKRKPIQPCWTKRGEGKGDEVEETAPVW 138 SCT FD+LWFC SPV+Q ++YY G D+C +K S L CL+ K K+ +++ +EA+ K KP W+ R EE A W Sbjct: 18 SCTTYFDALWFCYSPVHQMQQYYRLGALDNCSKKWSGLVDCLTLKTKRSSEVEEILEAREKEKP--QLWSTR------TPEEAAAYW 96
BLAST of NO28G01550 vs. NCBI_GenBank
Match: XP_010243478.1 (PREDICTED: uncharacterized protein LOC104587525 [Nelumbo nucifera]) HSP 1 Score: 68.9 bits (167), Expect = 1.500e-8 Identity = 31/64 (48.44%), Postives = 42/64 (65.62%), Query Frame = 0 Query: 51 SCTYIFDSLWFCLSPVYQAKEYYISGDFDSCEEKASALYMCLSNKVKKDPDMDRKIEAKLKRKP 115 SCT FDSLWFC SPV+Q ++YY G D+C EK +AL+ C + K K+ +M +E + K KP Sbjct: 46 SCTTCFDSLWFCYSPVHQMQQYYRLGVLDNCSEKWNALFDCFNLKTKRSSEMQEILETRQKTKP 109
BLAST of NO28G01550 vs. NCBI_GenBank
Match: XP_020252997.1 (uncharacterized protein C227.17c [Asparagus officinalis]) HSP 1 Score: 68.9 bits (167), Expect = 1.500e-8 Identity = 38/87 (43.68%), Postives = 50/87 (57.47%), Query Frame = 0 Query: 51 SCTYIFDSLWFCLSPVYQAKEYYISGDFDSCEEKASALYMCLSNKVKKDPDMDRKIEAKLKRKPIQPCWTKRGEGKGDEVEETAPVW 138 SCT FD+LWFC SP +Q ++YY G+FD+C K SAL CLS K K+ ++ +E + K KP WT R VEE + W Sbjct: 21 SCTKCFDALWFCYSPFHQMQQYYRYGEFDTCFGKWSALADCLSLKTKRSSEVQEILEEREKAKP--HIWTYR------TVEEASENW 99 The following BLAST results are available for this feature:
BLAST of NO28G01550 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO28G01550 ID=NO28G01550|Name=NO28G01550|organism=Nannochloropsis oceanica|type=gene|length=1914bpback to top protein sequence of NO28G01550.1 >NO28G01550.1-protein ID=NO28G01550.1-protein|Name=NO28G01550.1|organism=Nannochloropsis oceanica|type=polypeptide|length=147bpback to top Synonyms
Publications
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