NO28G01540, NO28G01540 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO28G01540 vs. NCBI_GenBank
Match: EWM20361.1 (1-acyl-sn-glycerol-3-phosphate acyltransferase [Nannochloropsis gaditana]) HSP 1 Score: 365.5 bits (937), Expect = 1.700e-97 Identity = 165/214 (77.10%), Postives = 191/214 (89.25%), Query Frame = 0 Query: 9 GPVIPAGQGGRLLRLVVSLWGYSSMLISFVVAWWLMVLALIFICPFLPSEKDRTLFLGWIFRYISSYVIHLNPFWHLQMVGPRPSSPPTKTLVMCNHLSNADAFFLSSALLPWETKYIAKADLFQVPFGGWAMGLAGDLAIHFTRDHTGWGVKKGTVGKMMEQCKSYLSDSIPIAVFPEGGRTENGRLRPFKDGFFQLALDTNADILPCALSGT 223 GPVIPAGQGG LR+VVS+WGY+SM+ISF+ +W L +LA IFICPFLPS K+R L LGWIFR +SS VI LNP+WHL+++GPRP+ PP+KTL+MCNHLSNADAFFLSSALLPWETKYIAKA LFQVPFGGWAMGLAGDL +HFTRD GWGV KGTVGK+MEQCK Y+S+ +P+ VFPEGGR+ENG LRPFKDGFFQLAL+T A+ILPCALSG+ Sbjct: 7 GPVIPAGQGGLALRVVVSIWGYTSMVISFIFSWMLQILACIFICPFLPSCKERLLLLGWIFRSVSSLVIRLNPYWHLRVLGPRPTRPPSKTLIMCNHLSNADAFFLSSALLPWETKYIAKASLFQVPFGGWAMGLAGDLPVHFTRDCHGWGVVKGTVGKLMEQCKVYISEGMPLTVFPEGGRSENGHLRPFKDGFFQLALETQAEILPCALSGS 220
BLAST of NO28G01540 vs. NCBI_GenBank
Match: CRH01483.1 (1-acyl-sn-glycerol-3-phosphate acyltransferase, putative [Plasmodium relictum]) HSP 1 Score: 194.9 bits (494), Expect = 3.900e-46 Identity = 98/256 (38.28%), Postives = 158/256 (61.72%), Query Frame = 0 Query: 21 LRLVVSLWGYSSMLISFVVAWWLMVLALIFICP-FLPSEKDRTLFLGWIFRYISSYVIH-LNPFWHLQMVGP-RPSSPPTKTLVMCNHLSNADAFFLSSALLPWETKYIAKADLFQVPFGGWAMGLAGDLAIHFTRDHTGWGVKKGTVGKMMEQCKSYLSDSIPIAVFPEGGRTENGRLRPFKDGFFQLALDTNADILPCALSGTEQAWPIYESLMGPATVYVRIGSPI-PSSSHTVQSLKAEVVRQMEKLQRDLP 273 LR+ +S + +S +LIS V++ ++A + P FL S++ R L LG F+Y +V LNPFW ++++ + + PT+TL++ NHLS+ D + +S+ LPWE K++ K+ LF++P G ++ L+GD+ I+FT++ GW +K G K+M+ C+ Y +I AVFPEG R+ G+L+ FK GFF+ A++ N +ILPCAL GT + WP+ L+ T+Y G P P+ T Q LK + + L ++ P Sbjct: 16 LRVFISFYIFSLILISLVISLSSQLIACVLFFPLFLYSKRARLLILGACFKYCCYFVCSPLNPFWKIRVIRRCKENYKPTRTLLIINHLSSVDPWIISACTLPWEMKFVFKSTLFRIPIAGQSLFLSGDIPIYFTKEKGGWAIKPGGKEKLMKICREYQDLNIGTAVFPEGTRSLTGQLQLFKSGFFRFAIENNCEILPCALHGTNKVWPVKSKLLDKGTMYFSFGEPFRPTPDMTYQELKDKTRNAIFDLIKEFP 271
BLAST of NO28G01540 vs. NCBI_GenBank
Match: CUG94214.1 (unnamed protein product [Bodo saltans]) HSP 1 Score: 192.2 bits (487), Expect = 2.500e-45 Identity = 105/256 (41.02%), Postives = 153/256 (59.77%), Query Frame = 0 Query: 21 LRLVVSLWGYSSMLISFVVAWWLMVLALIFICPFLPSEKDRTLFLGWIFRYIS-SYVIHLNPFWHLQMVGPRPS-SPPTKTLVMCNHLSNADAFFLSSALLPWETKYIAKADLFQVPFGGWAMGLAGDLAIHFTRDHTGWGVKKGTVGKMMEQCKSYLSDSIPIAVFPEGGRTEN--GRLRPFKDGFFQLALDTNADILPCALSGTEQAWPIYESLMGPATVYVRIGSPIPSSSHTVQSLKAEVVRQMEKLQRDLP 273 LR+ +++ + + IS+V+ W + + I PF +E+ + G IFR IS +V LNPFW +++ P K +V+ NHLSNAD +F +LP++ K+I K LF+VPFGGWA+ GDLAIHFT + GWG KKG+VG +M+Q ++ + S PIAVFPEG R G L+ FK GFF LA++ + ILP A+SG+E AWP + A+ +V G PI + HT Q L +V + + ++ P Sbjct: 5 LRVFATVYIFLMIFISWVIIWLVQTITKALIFPFTTAEQQADI-CGHIFRRISFVFVDVLNPFWRTKVLKALPEMKKDGKYIVVLNHLSNADPWFAIRPILPYDCKWICKGSLFKVPFGGWALKNNGDLAIHFTAEKGGWGTKKGSVGALMDQARACVRRSQPIAVFPEGVRNPEPLGPLQEFKLGFFTLAVEEDVTILPIAISGSETAWPRGDWKFNTASCFVTCGEPIAAKGHTAQELCDKVKQVISDMRESHP 259
BLAST of NO28G01540 vs. NCBI_GenBank
Match: EKF33286.1 (1-acyl-sn-glycerol-3-phosphate acyltransferase, putative [Trypanosoma cruzi marinkellei]) HSP 1 Score: 190.7 bits (483), Expect = 7.300e-45 Identity = 101/258 (39.15%), Postives = 157/258 (60.85%), Query Frame = 0 Query: 19 RLLRLVVSLWGYSSMLISFVVAWWLMVLALIFICPFLPSEKDRTLFLGWIFRYISSYVI-HLNPFWHLQMVGPRPSSPPTKTLVMCNHLSNADAFFLSSALLPWETKYIAKADLFQVPFGGWAMGLAGDLAIHFTRDHTGWGVKKGTVGKMMEQCKSYLSDSIPIAVFPEGGRTEN--GRLRPFKDGFFQLALDTNADILPCALSGTEQAWPIYESLMGPATVYVRIGSPIPSSS-HTVQSLKAEVVRQMEKLQRDLP 273 +++R +V+ + + I +++AW L ++ ++ CPF+ EK R + G+IFR+ + LNPFW +++ P P+ K L+M NHLS AD F + LLP++ +IAK+ LF+VPFGGW + A DL +HF G +GTVG MME+ + L PIAVFPEG R+++ G L PF+ GFF+LA++ A I+P A+SGTE+ WP+ L+ +T Y G PI +S+ T + L+ V + + +L+ P Sbjct: 5 KVIRSIVTTYIILLIAIHWIIAWILQLILILLTCPFMSREK-RQDYCGFIFRFANFICTDFLNPFWRSEILRPFPNVKGKKVLIMMNHLSAADPFLMVRVLLPFDAAWIAKSGLFRVPFGGWCLSNADDLRVHFKNKREGLETVRGTVGVMMEEARRKLCRGRPIAVFPEGLRSKDPEGGLLPFRLGFFKLAVEEGATIVPIAISGTEKCWPLGSMLIDCSTAYFSCGDPIDASTFKTAEELRDHVWQVITELRESHP 261
BLAST of NO28G01540 vs. NCBI_GenBank
Match: SCO94129.1 (1-acyl-sn-glycerol-3-phosphate acyltransferase, putative [Plasmodium malariae]) HSP 1 Score: 189.1 bits (479), Expect = 2.100e-44 Identity = 95/255 (37.25%), Postives = 151/255 (59.22%), Query Frame = 0 Query: 21 LRLVVSLWGYSSMLISFVVAWWLMVLALIFICPFL-PSEKDRTLFLGWIFRYISSYVIHLNPFWHLQMV-GPRPSSPPTKTLVMCNHLSNADAFFLSSALLPWETKYIAKADLFQVPFGGWAMGLAGDLAIHFTRDHTGWGVKKGTVGKMMEQCKSYLSDSIPIAVFPEGGRTENGRLRPFKDGFFQLALDTNADILPCALSGTEQAWPIYESLMGPATVYVRIGSPI-PSSSHTVQSLKAEVVRQMEKLQRDLP 273 +RL+V+ + ++I +++ ++ P L S K R + G+ R+ +I LNPFW ++++ P PTKTL+ NHLS+ D + +++ + W K++ K+ LF+VPFGG A+ LAGD+ ++FT+ GW V++G V +M+ CK Y +I I VFPEG R+ +G+L+ FK GFF+ A++ N +ILPCAL GT+ WP+ + TVY+ G P PS + TV LK + + L +D P Sbjct: 16 IRLLVNTYFAIEVVIFVIISLVSQIICCFLFFPVLICSRKARLIIFGYCLRFCMYLIIVLNPFWRIKIIRKPNKGYRPTKTLLFFNHLSSLDPWIVNAGTIIWNVKFVFKSSLFKVPFGGQALYLAGDIPVYFTKGKGGWEVRQGGVEDIMKTCKEYQDLNISIVVFPEGTRSLSGQLQFFKSGFFRYAIENNCEILPCALHGTDNIWPVKSKTVDIGTVYLSFGEPFYPSENMTVDELKEKTRNAIFDLIKDFP 270
BLAST of NO28G01540 vs. NCBI_GenBank
Match: ESL09038.1 (1-acyl-sn-glycerol-3-phosphate acyltransferase [Trypanosoma rangeli SC58]) HSP 1 Score: 186.0 bits (471), Expect = 1.800e-43 Identity = 101/258 (39.15%), Postives = 150/258 (58.14%), Query Frame = 0 Query: 19 RLLRLVVSLWGYSSMLISFVVAWWLMVLALIFICPFLPSEKDRTLFLGWIFRYISSYVI-HLNPFWHLQMVGPRPSSPPTKTLVMCNHLSNADAFFLSSALLPWETKYIAKADLFQVPFGGWAMGLAGDLAIHFTRDHTGWGVKKGTVGKMMEQCKSYLSDSIPIAVFPEGGRTE--NGRLRPFKDGFFQLALDTNADILPCALSGTEQAWPIYESLMGPATVYVRIGSPIPSSS-HTVQSLKAEVVRQMEKLQRDLP 273 ++LRL+V+ + + + ++++V+W L VL ++ PFL S + G+IFR+ S + I +NP W ++ P P K L+M NHLS AD F + L P + +IAK LF+VPFGGW M A DL +HF G+ KGTVG MME+ + L PIA+FPEG R+ G L+PF+ GFF+LA++ A I+P A+SGT+ WP++ LM AT Y G + +S T + L+ V + + L+ P Sbjct: 5 KILRLLVTAYIFLLLAVAWIVSWILQVLFMVVTYPFL-SRSQQQDCCGFIFRFASFWCIDFMNPLWRSHILKPFPKVKGKKVLIMINHLSAADPFLMIRVLFPLDATWIAKNGLFRVPFGGWCMANADDLRVHFVNKRAGFETVKGTVGSMMEEARLKLRRGRPIALFPEGMRSSEPEGGLQPFRLGFFRLAVEEGAMIVPIAISGTQDCWPLFSPLMDQATAYFSCGDVVDASKFKTAEELRDHVWQVITDLRDSHP 261
BLAST of NO28G01540 vs. NCBI_GenBank
Match: CDO66908.1 (apicoplast 1-acyl-sn-glycerol-3-phosphate acyltransferase, putative [Plasmodium reichenowi] >SOV82995.1 1-acyl-sn-glycerol-3-phosphate acyltransferase, putative [Plasmodium reichenowi]) HSP 1 Score: 186.0 bits (471), Expect = 1.800e-43 Identity = 92/258 (35.66%), Postives = 153/258 (59.30%), Query Frame = 0 Query: 20 LLRLVVSLWGYSSMLISFVVAWWLMVLALIFICP-FLPSEKDRTLFLGWIFRYISSYVI--HLNPFWHLQMVGP-RPSSPPTKTLVMCNHLSNADAFFLSSALLPWETKYIAKADLFQVPFGGWAMGLAGDLAIHFTRDHTGWGVKKGTVGKMMEQCKSYLSDSIPIAVFPEGGRTENGRLRPFKDGFFQLALDTNADILPCALSGTEQAWPIYESLMGPATVYVRIGSPI-PSSSHTVQSLKAEVVRQMEKLQRDLP 273 L RL+++ + Y + ++ A +L L+ P FL S+K + LG ++ +Y++ +NPFW L ++ + PT T++ NHLS+ D + +++ L PW K++ K+ L +VP GG A+ L+G++ +HFT+D GWG+K+G V K+M CK Y +IP+ +FPEG R+ G L+ FK GFF+ A++ N +ILPCAL G+ + WP+ SL T+Y G P P+ T + L+ + M ++ ++ P Sbjct: 15 LFRLILTTYIYIVIFLTLSFALICQLLCLVIFFPLFLYSKKAKLYILGLCIQF-GAYMLCSFINPFWKLVIIRKNKKKYKPTNTILFVNHLSSVDPWIVNATLFPWHIKFVFKSSLLKVPIGGPALYLSGNIPLHFTKDKGGWGLKQGEVQKLMNICKEYQDMNIPLVIFPEGTRSVQGHLQLFKSGFFRFAIENNCEILPCALHGSNKVWPLKSSLFDKGTIYFSFGEPFKPTPGMTYEELRDKTRMIMHEMIKEFP 271
BLAST of NO28G01540 vs. NCBI_GenBank
Match: XP_019969990.1 (1-acyl-sn-glycerol-3-phosphate acyltransferase, putative, partial [Plasmodium reichenowi] >KYN94096.1 1-acyl-sn-glycerol-3-phosphate acyltransferase, putative, partial [Plasmodium reichenowi]) HSP 1 Score: 186.0 bits (471), Expect = 1.800e-43 Identity = 92/258 (35.66%), Postives = 153/258 (59.30%), Query Frame = 0 Query: 20 LLRLVVSLWGYSSMLISFVVAWWLMVLALIFICP-FLPSEKDRTLFLGWIFRYISSYVI--HLNPFWHLQMVGP-RPSSPPTKTLVMCNHLSNADAFFLSSALLPWETKYIAKADLFQVPFGGWAMGLAGDLAIHFTRDHTGWGVKKGTVGKMMEQCKSYLSDSIPIAVFPEGGRTENGRLRPFKDGFFQLALDTNADILPCALSGTEQAWPIYESLMGPATVYVRIGSPI-PSSSHTVQSLKAEVVRQMEKLQRDLP 273 L RL+++ + Y + ++ A +L L+ P FL S+K + LG ++ +Y++ +NPFW L ++ + PT T++ NHLS+ D + +++ L PW K++ K+ L +VP GG A+ L+G++ +HFT+D GWG+K+G V K+M CK Y +IP+ +FPEG R+ G L+ FK GFF+ A++ N +ILPCAL G+ + WP+ SL T+Y G P P+ T + L+ + M ++ ++ P Sbjct: 15 LFRLILTTYIYIVIFLTLSFALICQLLCLVIFFPLFLYSKKAKLYILGLCIQF-GAYMLCSFINPFWKLVIIRKNKKKYKPTNTILFVNHLSSVDPWIVNATLFPWHIKFVFKSSLLKVPIGGPALYLSGNIPLHFTKDKGGWGLKQGEVQKLMNICKEYQDMNIPLVIFPEGTRSVQGHLQLFKSGFFRFAIENNCEILPCALHGSNKVWPLKSSLFDKGTIYFSFGEPFKPTPGMTYEELRDKTRMIMHEMIKEFP 271
BLAST of NO28G01540 vs. NCBI_GenBank
Match: SCP05838.1 (1-acyl-sn-glycerol-3-phosphate acyltransferase, putative [Plasmodium ovale]) HSP 1 Score: 185.3 bits (469), Expect = 3.100e-43 Identity = 102/260 (39.23%), Postives = 157/260 (60.38%), Query Frame = 0 Query: 20 LLRLVVSLWGYSSMLISFVVAWWLMVLALIFICPF---LPSEKDRTLFLGWIFRYISSYVI--HLNPFWHLQMV-GPRPSSPPTKTLVMCNHLSNADAFFLSSALLPWETKYIAKADLFQVPFGGWAMGLAGDLAIHFTRDHTGWGVKKGTVGKMMEQCKSYLSDSIPIAVFPEGGRTENGRLRPFKDGFFQLALDTNADILPCALSGTEQAWPIYESLMGPATVYVRIGSPI-PSSSHTVQSLKAEVVRQMEKLQRDLP 273 ++RL VS Y S+L+ F++ + ++ + FI F L S + R G+ FR I+ Y I LNPFW ++++ P+ P +TL+M NHLS+ D + +S+ L W K+I KA LF+VP GG A+ LAGD+ I+FT+ GW VK G V +M+QC+ Y +I + +FPEG R+ NG+L+ FK GFF+ A++ N++ILP + GT + WP+ L+ T Y+ G PI P+ T+ LK + M +L ++ P Sbjct: 15 IIRLFVS--AYISVLLIFLMTFAVVSQFICFILFFPIILYSREARITIFGYCFR-IAMYTICSPLNPFWRVKIIRKPKKGYYPYRTLLMSNHLSSLDPWLISAYTLKWNIKFIFKASLFKVPIGGLALYLAGDIPIYFTKGKGGWEVKSGGVDSVMKQCREYQDLNICLTIFPEGTRSLNGQLQLFKSGFFRYAIENNSEILPFVVHGTSKLWPVRGKLLDMGTAYISFGDPIQPTPGMTIDQLKEKTRNAMLELIKEFP 271
BLAST of NO28G01540 vs. NCBI_GenBank
Match: SOV83290.1 (1-acyl-sn-glycerol-3-phosphate acyltransferase, putative [Plasmodium sp. gorilla clade G3]) HSP 1 Score: 185.3 bits (469), Expect = 3.100e-43 Identity = 90/231 (38.96%), Postives = 140/231 (60.61%), Query Frame = 0 Query: 48 LIFICPFLPSEKDRTLFLGWIFRYISSYVI--HLNPFWHLQMVGPRPSS---PPTKTLVMCNHLSNADAFFLSSALLPWETKYIAKADLFQVPFGGWAMGLAGDLAIHFTRDHTGWGVKKGTVGKMMEQCKSYLSDSIPIAVFPEGGRTENGRLRPFKDGFFQLALDTNADILPCALSGTEQAWPIYESLMGPATVYVRIGSPI-PSSSHTVQSLKAEVVRQMEKLQRDLP 273 +IF FL S+K + LG+ ++ +Y++ +NPFW L +V R SS PT T++ NHLS+ D + +++ PW K++ K+ L +VP GG A+ +G + +HFT+D GWGVK+G V K+M CK Y ++P+A+FPEG R+ G L+ FK GFF+ A++ N +ILPC L GT + WP+ SL T+Y G P P+ T + L+ + M ++ ++LP Sbjct: 44 VIFFPLFLYSKKAKLYILGFCIQF-GAYLLCSFINPFWKLVIV--RKSSKRYKPTNTILFINHLSSVDPWVVNATTFPWSIKFVFKSSLLKVPIGGQALYFSGSIPLHFTKDRGGWGVKEGEVQKIMNICKEYQEMNVPLAIFPEGTRSVQGHLQLFKSGFFRFAIENNCEILPCVLHGTNKVWPLKSSLFDKGTIYFSFGEPFKPTPGMTYEQLRDKTRMIMHEMIKELP 271 The following BLAST results are available for this feature:
BLAST of NO28G01540 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO28G01540 ID=NO28G01540|Name=NO28G01540|organism=Nannochloropsis oceanica|type=gene|length=3819bpback to top protein sequence of NO28G01540.1 >NO28G01540.1-protein ID=NO28G01540.1-protein|Name=NO28G01540.1|organism=Nannochloropsis oceanica|type=polypeptide|length=325bpback to top Synonyms
Publications
|