NO28G01490, NO28G01490 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO28G01490 vs. NCBI_GenBank
Match: EWM20641.1 (Bestrophin/UPF0187 [Nannochloropsis gaditana]) HSP 1 Score: 302.4 bits (773), Expect = 3.800e-78 Identity = 161/292 (55.14%), Postives = 187/292 (64.04%), Query Frame = 0 Query: 423 KFDGDNFILDPTRPRLVDLLTAEEAKLFKRMRVNARPVYMMSEMNLLAYRIISLSKETSIRINIDNKFQEVLSSWNGMLRVVDLRIPFPYTHVVNLLTFIFVFGAPFIYTANAQDWAGDDVILLSSLLLGVAFYGLEDMARKVENPFGWDAEDHDLEGFGIGLNLGKARRTEITKSRGWLKKVRENCYAVSQRATRYHQPFPPCPCTSLSLRSRFYKRHRHLLHTLIPNISPPSSFLPPSFPPTDGQEIAKMCGVVEPMEFMPHAELFDDLTEKYQVISYKEYRHTASVVME 715 KF+ D F+LDPTRPRLVDLLT EE + F+RM VN+RPVY+++EMNLLAYRI+ LSKETSIRINIDNKFQEVL+ WNGMLRV +LRIPFPYTHVVNLLTFIFVFGAPFIYT+ Q+WA +DV+L +SLLLGVAFYGLEDMARK ++P GWD EDHDLE FG+ LNL DGQE+AK+CGV EPMEFMP++ELFDDL + +QV+SYK Y T SV ME Sbjct: 6 KFNKDTFVLDPTRPRLVDLLTEEEVQQFRRMPVNSRPVYLITEMNLLAYRILGLSKETSIRINIDNKFQEVLAGWNGMLRVENLRIPFPYTHVVNLLTFIFVFGAPFIYTSRTQNWAENDVLLFASLLLGVAFYGLEDMARKCQHPLGWDLEDHDLEIFGVRLNL-------------------------------------------------------------------------------DGQEMAKICGVQEPMEFMPYSELFDDLPDFFQVMSYKSYLQTTSVSME 218
BLAST of NO28G01490 vs. NCBI_GenBank
Match: EWM20646.1 (Bestrophin/UPF0187, partial [Nannochloropsis gaditana]) HSP 1 Score: 252.7 bits (644), Expect = 3.500e-63 Identity = 129/199 (64.82%), Postives = 156/199 (78.39%), Query Frame = 0 Query: 211 EESLSS--TGKARRRLTRHVTVSQLAEPRVPRKEQHVLSEEKAYPIPHPYPKKLRNKQHRMDRPWSFIKILFYLKGTVIMNIWPQMLLGFLLVASIKILHATLNISYQVNPRIFSIHTILGSTLAFITVFRTNRAYDSYIEGRKLVSAIVNCLRTALMDMYINDPRDERPETREMLVELAEDFRRKSNVLFAFIRQSTR 408 ++SL S +G R L+R TVSQL P+VPR+E HVLSE AY IP PYP+K + + RPWSFI+ILFY KGTV+ NIWPQ+LLG L++ IK+L + +++YQVNPRI +IHTILGS L FITVFRTNRAYDSYIEGRK ++ +VN LRTA+MDMYINDPRDE ETRE+LVELAEDFRRK N+L+AFIR R Sbjct: 136 DKSLQSWESGTGGRHLSRTATVSQLVNPKVPRRECHVLSELHAYRIPQPYPRKDQQRSCITTRPWSFIRILFYFKGTVLENIWPQILLGVLVIIFIKVLQSVFDVTYQVNPRISTIHTILGSVLGFITVFRTNRAYDSYIEGRKFIARVVNNLRTAMMDMYINDPRDETLETREILVELAEDFRRKCNILYAFIRSEGR 334
BLAST of NO28G01490 vs. NCBI_GenBank
Match: XP_002501798.1 (membrane protein [Micromonas commoda] >ACO63056.1 membrane protein [Micromonas commoda]) HSP 1 Score: 149.4 bits (376), Expect = 4.200e-32 Identity = 109/326 (33.44%), Postives = 169/326 (51.84%), Query Frame = 0 Query: 272 PWSFIKILFYLKGTVIMNIWPQMLLG---FLLVASIKILHATLNI-SYQVNPRIFS--IHTILGSTLAFITVFRTNRAYDSYIEGRKLVSAIVNCLRTA--LMDMYINDPRDERPETREMLVELAEDFRRKSNVLFAFIRQSTRECKEGF---CPASDLGDMKFDGDNFILDPT--RPRLVDLLTAEEAKLFKRMRVNARPVYMMSEMNLLA--YRIISLSKETSIRINIDNKFQEVLSSWNGMLRVVDLRIPFPYTHVVNLLTFIFVFGAPFIYTANAQDWAGDDVILLSSLLLGVAFYGLEDMARKVENPFGWDAEDHDLEGFG 583 P++FI ILF +GTV+ I PQ LL + IKI NI S+ P FS H++ G + F+ VFRT+ +Y + EG+K + + +C+R A + ++ DE+ ++ + E RR SNVL+AFIRQ+ RE + G+ CPA D + D RP L LLT EE + F + N R ++ M + +R + E +I + + L ++ M R+V ++PF Y H+VN L FIFVF APF++T + W + S ++ ++FYG+ ++AR +E+P+ W HDL G G Sbjct: 1047 PFTFITILFRYRGTVLPKIMPQTLLAAAVSIFAQIIKIYWCGANITSHSECPLAFSETAHSVAGGIIGFMLVFRTSISYYRFYEGKKYLGHLYDCIRNANIAFNSFLRVGNDEQGHDAKINADKVE-LRRLSNVLYAFIRQAVREHRHGYPEGCPAPS------DDAGLVRDDVFGRPGLGVLLTDEEKEEFLAIDPNNRANMVVWRMQSIVEHHRRLGHVCERG-AFDIYHDLEGCLEAFKHMERIVSTKMPFQYLHMVNFLLFIFVFSAPFVFTTGFK-WLSP----IPSCIVAISFYGVAEVARSIEDPYSWTKPCHDLTGTG 1359
BLAST of NO28G01490 vs. NCBI_GenBank
Match: XP_003058502.1 (membrane protein [Micromonas pusilla CCMP1545] >EEH56957.1 membrane protein [Micromonas pusilla CCMP1545]) HSP 1 Score: 137.5 bits (345), Expect = 1.600e-28 Identity = 102/325 (31.38%), Postives = 161/325 (49.54%), Query Frame = 0 Query: 272 PWSFIKILFYLKGTVIMNIWPQMLLGF---LLVASIKILHATLNI-SYQVNPRIFS--IHTILGSTLAFITVFRTNRAYDSYIEGRKLVSAIVNCLRTALM--DMYINDPRDERPET--REMLVELAEDFRRKSNVLFAFIRQSTRECKEGF---CPASDLGDMKFDGDNFILDPTRPRLVDLLTAEEAKLFKRMRVNARPVYMMSEMNLLAYRIISLSKETSI-RINIDNKFQEVLSSWNGMLRVVDLRIPFPYTHVVNLLTFIFVFGAPFIYTANAQDWAGDDVILLSSLLLGVAFYGLEDMARKVENPFGWDAEDHDLEGFG 583 P +F +LF +GTV+ I PQ L +L +KI NI S+ P FS H++ G + F+ VFRT+ +Y + EG+K + + + +R A + + ++ DE L + RR S+VL+AFIRQ+ RE + G+ C + D D F RP L LLT E FK + N R ++ +M + L + +I + + L ++ M R+V ++PF Y H+VN L FIFVF APF++T + W + S ++ ++FYG+ ++AR +E+P+ W HDL G G Sbjct: 1029 PLTFFTVLFRYRGTVLPKIMPQTLFAVFVSVLAQVVKIYWCGANITSHSECPLAFSETAHSVAGGIIGFMLVFRTSISYYRFYEGKKYLGNLYDSVRNANIGFNAFMRSSEDEHVHAGFSHSLNRDRVELRRLSSVLYAFIRQAVREHRHGYPTRCDVAATDASLVDDDLF----GRPSLGVLLTDAERAEFKALDFNNRANMVVWKMQSIVEHHRRLGHVSDRGAFDIYHDLEGCLEAYKHMERIVSTKMPFQYLHMVNFLLFIFVFSAPFVFTTGFK-WLSP----IPSCIVAISFYGVAEVARSIEDPYSWVKPCHDLTGVG 1344
BLAST of NO28G01490 vs. NCBI_GenBank
Match: XP_009033392.1 (hypothetical protein AURANDRAFT_61213 [Aureococcus anophagefferens] >EGB12347.1 hypothetical protein AURANDRAFT_61213 [Aureococcus anophagefferens]) HSP 1 Score: 127.5 bits (319), Expect = 1.700e-25 Identity = 97/338 (28.70%), Postives = 156/338 (46.15%), Query Frame = 0 Query: 270 DRPWSFIKIL--FYLKGTVIMNIWPQMLLGFLLVASIKILHATLNISYQVNPRIFSIHTILGSTLAFITVFRTNRAYDSYIEGRKLVSAIVNCLRTALMDM------------YINDPRD------ERPETREMLVELAEDFRRKSNVLFAFIRQSTRECKEGFCPASDLGDMKFDGDNFILDPTRPRLVDLLTAEEAKLFKRMRVNARPVYMM-SEMNLLAYRIISLSKETSIRINIDNKFQEVLSSWNGMLRVVDLRIPFPYTHVVNLLTFIFVFG-----APFIYTANAQDWAGDDVILLSSLLLGVAFYGLEDMARKVENPFGWDAEDHDLEGF 582 D W FI I +L G + +WP ++ + I +L L + + + ++G+ L+ + VFRTN AY+ Y EG+K + N +R +M+ ++N ER E++ EL E RR++NVL +RQ RE + GF P L ++ ++ +ILDP+RPRLVD+LT E + + AR + S M+ L SL+++ + QE+L ++ R+VD +PF YT A + T W I L S++ +YG+ +A ++ENPF + DHDL+GF Sbjct: 5 DNRWWFIAIFTRTHLVGRFVQQLWPNLVTLVFVNLVINLLD-HLGVKSMPSSQFDITQGLVGAVLSLLLVFRTNSAYERYYEGKKAYGVVTNQVRQIIMNAHAFLAFHEDASGHLNARYQPAAELRERAHEAEVVHELRERVRRQANVLLGVLRQDLREKRCGFVPECALHEVPYNKRTWILDPSRPRLVDMLTPREVATYGTVSSGARVMLASHSLMDALQRLAPSLAQDRAFTECSTRNIQELLDAFKSCQRIVDTPLPFTYTXXXXXXXXXXXXXXXXXVAYWARTEKRLHWYSMSGI-LPSIVTAFFYYGVMQIAIEIENPFNFADVDHDLDGF 340
BLAST of NO28G01490 vs. NCBI_GenBank
Match: XP_005856043.1 (membrane protein, partial [Nannochloropsis gaditana CCMP526] >EKU20316.1 membrane protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 114.0 bits (284), Expect = 1.900e-21 Identity = 70/204 (34.31%), Postives = 106/204 (51.96%), Query Frame = 0 Query: 290 IWPQMLLGFLLVASIKILHATLN------------ISYQVNPRIFSIHTILGSTLAFITVFRTNRAYDSYIEGRKLVSAIVNCLRTALMDMY---INDPRDERPETR---------EMLVELAEDFRRKSNVLFAFIRQSTRECKEGFCPASDLGDMKFDGDNFILDPTRPRLVDLLTAEEAKLFKRMRVNARPVYMMSEMNLL 470 +WP + G ++L AT++ + + P + H +GS L F FRTN AYD Y EGRK++S I+ R+ L D+Y + P P + ++ ++ D RR+ N+LFAFIRQS RE GF P SD+G + F F LDP+ P L+DLL+ EEA+ + + ARP + +E+N++ Sbjct: 72 LWPYIGFGIFSSILAQLLLATVSQEHVEQGSFLTMLDVKDYPDLKIGHGFIGSILGFSIAFRTNAAYDRYYEGRKILSIILENSRSILRDVYSFLLKAPAFPSPTSSCSSLPVPDDAAVLVISSDLRRRLNILFAFIRQSVRESLSGFSPNSDMGTVSFSNSTFYLDPSLPHLLDLLSKEEAERYAALSPRARPGAVSAEINII 275
BLAST of NO28G01490 vs. NCBI_GenBank
Match: XP_007511540.1 (membrane protein [Bathycoccus prasinos] >CCO17661.1 membrane protein [Bathycoccus prasinos]) HSP 1 Score: 110.2 bits (274), Expect = 2.800e-20 Identity = 96/340 (28.24%), Postives = 153/340 (45.00%), Query Frame = 0 Query: 266 QHRMDRPWSFIKILFYLKGTVIMNI-WPQMLLGFL--LVASIKILHATLNI-SYQVNPRIFS--IHTILGSTLAFITVFRTNRAYDSYIEGRKLVSAI-----------VNCLRTALMDMYINDPRDERPETREM-LVELAEDFRRKSNVLFAFIRQSTRECKEGFCPASDLGDMKFDGDNFILDPTR--PRLVDLLTAEEAKLFKRMRVNARPVYMMSEMNLL---AYRIISLSKETSIRINIDNKFQEVLSSWNGMLRVVDLRIPFPYTHVVNLLTFIFVFGAPFIYTANAQDWAGDDVILLSSLLLGVAFYGLEDMARKVENPFGWDAEDHDLEGFG 583 Q R SF LF TV+ I WP + G L L K+ N+ S+Q FS H++ G + F FR + +Y Y E +K + A+ + LR L D + T + VEL ++ RR SN +F FIR RE + G ++ D I + R P L +LT E ++RP ++++ L A + +S+ + + D + L + N + R+ + ++P+ Y H++N F FV+ APFI+TA W ++L+ +AFYG ++AR +ENPF +D + HD+E G Sbjct: 978 QRRRLTSMSFFTDLFAWNNTVLPGILWPTIFAGLLAGLANYTKVKQCGKNVTSHQDCAFAFSDTAHSVCGGVIGFTLCFRASISYYRYYEAKKFMGALCEGARNFACGSLAFLRPDLPGELQYDGDAYKASTAFISSVELRDELRRLSNCMFGFIRHIARETRCGVRKVGEVQSTNIDFSQLIREDPRGNPSLAVILTESEKDFMCGKLPSSRPALVVAKCQKLVEEARKRNDISERGAFDLYDD--LNDCLVACNNLERISETKMPWIYLHLLNFALFAFVYSAPFIFTAGF-GWLSP----APAMLIAIAFYGTAEVARNMENPFDYDTDGHDIEAAG 1310
BLAST of NO28G01490 vs. NCBI_GenBank
Match: XP_003080714.2 (Bestrophin/UPF0187 [Ostreococcus tauri] >CEG01422.1 Bestrophin/UPF0187 [Ostreococcus tauri]) HSP 1 Score: 102.4 bits (254), Expect = 5.800e-18 Identity = 96/382 (25.13%), Postives = 183/382 (47.91%), Query Frame = 0 Query: 222 RRLTRHVTVSQLAEPRVPRKEQHVLSEE--KAYPIPHPYPKKLRNKQHRMDRPWSFIKILFYLKGTVIMNIWPQMLL-GFLLVAS--IKILHATLNISYQVNPRIF----SIHTILGSTLAFITVFRTNRAYDSYIEGRKLVSAIVN---CLRTALMDMYINDPRDERPETREMLVELAEDFRRKSNVLFAFIRQSTRECKEGFCPASDLGDMKFDGDNFILDPTR-PRLVDLLTAEEAKLFKRMRVNARPVYMMSEMNLLAYRIISLSKETSIRINIDNK--------FQEVLSSWNGMLRVVDLRIPFPYTHVVNLLTFIFVFGAPFIYTANAQDWAGDDVILLSSLLLGVAFYGLEDMARKVENPFGWDAEDHDLEGFG 583 R+LT V + + + +H +SE ++ +P+ + ++ + ++ + ++ +F L+GTVI + Q++L G + +A+ +KI +S V F S H + G+ + F +FR +Y Y +G+ + +VN CL + M + + P + + E A + RR SNVL F+RQ+ RE + G P+S L D +I D + P L LL+ +E ++ + AR + + A +IIS+ E +I ++ + +S+ R++ +PF + H++N + F+FV APF++ + + W L S+L+ + +G+ ++ +++PFGW HDL G Sbjct: 686 RQLTPSSKVKKPIRTLILERFKHAISERSLRSRLLPNEFDREAASVKNILAMRIGWLTNVFILQGTVIPGLSVQIILAGAIALAANGLKIRECGNTVS-NVTQCAFTFDSSAHVMSGAIIGFTLIFRLALSYTRYYDGKGALGLMVNSIRCLNVGVSTMLRSSRINATPNVLKEVDEDAAEIRRLSNVLMGFMRQAIRERRHGVDPSS-LTKKAPTTDEYIEDMSGWPSLSLLLSDKEKDVYAKADYRAR-------IGICASKIISIIDERRRLKHISDRSAYEMLGHVENCISACATAERLLASSMPFAFLHLMNFVLFVFVMTAPFVFVTSYK-WLAP----LPSMLVAASLFGIAEVGSLLDDPFGWSEPKHDLTKAG 1053
BLAST of NO28G01490 vs. NCBI_GenBank
Match: OUS46902.1 (Bestrophin, RFP-TM, chloride channel-domain-containing protein [Ostreococcus tauri]) HSP 1 Score: 102.4 bits (254), Expect = 5.800e-18 Identity = 96/382 (25.13%), Postives = 183/382 (47.91%), Query Frame = 0 Query: 222 RRLTRHVTVSQLAEPRVPRKEQHVLSEE--KAYPIPHPYPKKLRNKQHRMDRPWSFIKILFYLKGTVIMNIWPQMLL-GFLLVAS--IKILHATLNISYQVNPRIF----SIHTILGSTLAFITVFRTNRAYDSYIEGRKLVSAIVN---CLRTALMDMYINDPRDERPETREMLVELAEDFRRKSNVLFAFIRQSTRECKEGFCPASDLGDMKFDGDNFILDPTR-PRLVDLLTAEEAKLFKRMRVNARPVYMMSEMNLLAYRIISLSKETSIRINIDNK--------FQEVLSSWNGMLRVVDLRIPFPYTHVVNLLTFIFVFGAPFIYTANAQDWAGDDVILLSSLLLGVAFYGLEDMARKVENPFGWDAEDHDLEGFG 583 R+LT V + + + +H +SE ++ +P+ + ++ + ++ + ++ +F L+GTVI + Q++L G + +A+ +KI +S V F S H + G+ + F +FR +Y Y +G+ + +VN CL + M + + P + + E A + RR SNVL F+RQ+ RE + G P+S L D +I D + P L LL+ +E ++ + AR + + A +IIS+ E +I ++ + +S+ R++ +PF + H++N + F+FV APF++ + + W L S+L+ + +G+ ++ +++PFGW HDL G Sbjct: 739 RQLTPSSKVKKPIRTLILERFKHAISERSLRSRLLPNEFDREAASVKNILAMRIGWLTNVFILQGTVIPGLSVQIILAGAIALAANGLKIRECGNTVS-NVTQCAFTFDSSAHVMSGAIIGFTLIFRLALSYTRYYDGKGALGLMVNSIRCLNVGVSTMLRSSRINATPSVLKEVDEDAAEIRRLSNVLMGFMRQAIRERRHGVDPSS-LTKKAPTTDEYIEDMSGWPSLSLLLSDKEKDVYAKADYRAR-------IGICASKIISIIDERRRLKHISDRSAYEMLGHVENCISACATAERLLASSMPFAFLHLMNFVLFVFVMTAPFVFVTSYK-WLAP----LPSMLVAASLFGIAEVGSLLDDPFGWSEPKHDLTKAG 1106
BLAST of NO28G01490 vs. NCBI_GenBank
Match: WP_071722765.1 (MULTISPECIES: hypothetical protein [Bacillus] >OJE40956.1 hypothetical protein BAQ47_10025 [Bacillus sp. N24]) HSP 1 Score: 91.7 bits (226), Expect = 1.000e-14 Identity = 86/315 (27.30%), Postives = 148/315 (46.98%), Query Frame = 0 Query: 279 LFYLKGTVIMNIWPQMLLGFLLVASIKILH---ATLNISYQVNPRIFSIHTILGSTLAFITVFRTNRAYDSYIEGRKLVSAIVNCLRTALMDMYINDPRDERPETREMLVELAEDFRRKSNVLFAFIRQSTRECKEGFCPASDLGDMKFDGDNFILDPTRPRLVDLLTAEEAKLFKRMRVNARPVYMMSEMNLLAYRIISLSKET-----SIRINIDNKFQEVLSSWNGMLRVVDLRIPFPYTHVVNLLTFIFVFGAPFIYTANAQDWAGDDVILLSSLLLGVAFYGLEDMARKVENPFGWDAEDHDLEGFGIGL 586 +F LKGTVI +I+PQ+LL + I ++H AT+ ++ P I I+G +L + VFRTN AYD Y EGRKL I C R + + + +E L L ++L AF + + ++ DL ++K L+++ T +E ++ + + +++ + L+ I+S +T + IN++ +L++ G R+ IPF Y + +L IF P I ++ W V +L+++ + AF G+E + ++E+PFG D D LEG IG+ Sbjct: 13 IFTLKGTVIRDIFPQILLYICVSTVITVIHYYYATIKMNQ--TPWI-----IVGGSLGLLLVFRTNTAYDRYWEGRKLFGTIGACSRNLAVSFLCYWDSEGKKTDQEQLKFL--------HLLIAFPKIAKGHLRD----EKDLSEIK-------------ELLNVCTEKEKEMLE------QSMHLPISIVLMLKTILSKGLKTGRIHPNAIINMEADLNNLLTAVGGCDRIKTTPIPFAYFAHIKILLLIFCGTLP-IGLVDSLGW----VTVLATMFISFAFIGIEAIGVEIEDPFGQDPNDLPLEGICIGV 284 The following BLAST results are available for this feature:
BLAST of NO28G01490 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following gene feature(s) are orthologous to this gene:
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO28G01490 ID=NO28G01490|Name=NO28G01490|organism=Nannochloropsis oceanica|type=gene|length=4312bpback to top protein sequence of NO28G01490.3 >NO28G01490.3-protein ID=NO28G01490.3-protein|Name=NO28G01490.3|organism=Nannochloropsis oceanica|type=polypeptide|length=594bpback to top protein sequence of NO28G01490.2 >NO28G01490.2-protein ID=NO28G01490.2-protein|Name=NO28G01490.2|organism=Nannochloropsis oceanica|type=polypeptide|length=723bpback to top protein sequence of NO28G01490.1 >NO28G01490.1-protein ID=NO28G01490.1-protein|Name=NO28G01490.1|organism=Nannochloropsis oceanica|type=polypeptide|length=644bpback to top Synonyms
Publications
|